RNA–Protein interactions for RNA: ENST00000637393.1

GRIN2A-215, Transcript of glutamate ionotropic receptor NMDA type subunit 2A, humanhuman

TSL 3

Gene GRIN2A, Length 833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2A-215ENST00000637393 NISCHQ9Y2I1 1504 aa26.65■■□□□ 1.86
GRIN2A-215ENST00000637393 ABCC9O60706 1549 aa24.21■■□□□ 1.47
GRIN2A-215ENST00000637393 CCDC180Q9P1Z9 1646 aa23.47■■□□□ 1.35
GRIN2A-215ENST00000637393 DNAJC5BQ9UF47 199 aa23.43■■□□□ 1.34
GRIN2A-215ENST00000637393 RB1CC1Q8TDY2 1594 aa22.71■■□□□ 1.23
GRIN2A-215ENST00000637393 PABPN1Q86U42 306 aaKnown RBP eCLIP22.44■■□□□ 1.18
GRIN2A-215ENST00000637393 ZCCHC6Q5VYS8 1495 aaKnown RBP22.4■■□□□ 1.18
GRIN2A-215ENST00000637393 NACADO15069 1562 aa22.38■■□□□ 1.17
GRIN2A-215ENST00000637393 UNC13AQ9UPW8 1703 aa22.18■■□□□ 1.14
GRIN2A-215ENST00000637393 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
GRIN2A-215ENST00000637393 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
GRIN2A-215ENST00000637393 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
GRIN2A-215ENST00000637393 DNAJC5Q9H3Z4 198 aa22.04■■□□□ 1.12
GRIN2A-215ENST00000637393 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
GRIN2A-215ENST00000637393 MYO15BQ96JP2 1530 aa21.87■■□□□ 1.09
GRIN2A-215ENST00000637393 CC2D2AQ9P2K1 1620 aa21.83■■□□□ 1.08
GRIN2A-215ENST00000637393 SHROOM4Q9ULL8 1493 aa21.71■■□□□ 1.07
GRIN2A-215ENST00000637393 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
GRIN2A-215ENST00000637393 SCRIBQ14160 1630 aa21.34■■□□□ 1.01
GRIN2A-215ENST00000637393 CUX2O14529 1486 aa21.17■□□□□ 0.98
GRIN2A-215ENST00000637393 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
GRIN2A-215ENST00000637393 SUPT5HO00267 1087 aaKnown RBP20.73■□□□□ 0.91
GRIN2A-215ENST00000637393 TRIM41Q8WV44 630 aa20.71■□□□□ 0.91
GRIN2A-215ENST00000637393 NCAPD3P42695 1498 aa20.69■□□□□ 0.9
GRIN2A-215ENST00000637393 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
GRIN2A-215ENST00000637393 NESP48681 1621 aa20.61■□□□□ 0.89
GRIN2A-215ENST00000637393 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
GRIN2A-215ENST00000637393 MROH2BQ7Z745 1585 aa20.55■□□□□ 0.88
GRIN2A-215ENST00000637393 THOC2Q8NI27 1593 aaKnown RBP20.53■□□□□ 0.88
GRIN2A-215ENST00000637393 ATAD2BQ9ULI0 1458 aa20.51■□□□□ 0.87
GRIN2A-215ENST00000637393 SMARCA4P51532 1647 aa20.51■□□□□ 0.87
GRIN2A-215ENST00000637393 HMGXB3Q12766 1538 aa20.45■□□□□ 0.86
GRIN2A-215ENST00000637393 WIZO95785 1651 aa20.4■□□□□ 0.86
GRIN2A-215ENST00000637393 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
GRIN2A-215ENST00000637393 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
GRIN2A-215ENST00000637393 PEG3Q9GZU2 1588 aa20.3■□□□□ 0.84
GRIN2A-215ENST00000637393 KIF21AQ7Z4S6 1674 aa20.28■□□□□ 0.84
GRIN2A-215ENST00000637393 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
GRIN2A-215ENST00000637393 PDS5BQ9NTI5 1447 aa20.23■□□□□ 0.83
GRIN2A-215ENST00000637393 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
GRIN2A-215ENST00000637393 MRC2Q9UBG0 1479 aa20.1■□□□□ 0.81
GRIN2A-215ENST00000637393 OSCARQ8IYS5 282 aa20.09■□□□□ 0.81
GRIN2A-215ENST00000637393 WDR62O43379 1518 aa20.08■□□□□ 0.81
GRIN2A-215ENST00000637393 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
GRIN2A-215ENST00000637393 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
GRIN2A-215ENST00000637393 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
GRIN2A-215ENST00000637393 RIMBP3CA6NJZ7 1639 aa19.9■□□□□ 0.78
GRIN2A-215ENST00000637393 RIMBP3BA6NNM3 1639 aa19.9■□□□□ 0.78
GRIN2A-215ENST00000637393 RIMBP3Q9UFD9 1639 aa19.9■□□□□ 0.78
GRIN2A-215ENST00000637393 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
GRIN2A-215ENST00000637393 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
GRIN2A-215ENST00000637393 ARHGEF11O15085 1522 aa19.77■□□□□ 0.76
GRIN2A-215ENST00000637393 URB2Q14146 1524 aaKnown RBP19.69■□□□□ 0.74
GRIN2A-215ENST00000637393 CYB5RLQ6IPT4 315 aa19.67■□□□□ 0.74
GRIN2A-215ENST00000637393 TRHP20396 242 aaPredicted RBP19.66■□□□□ 0.74
GRIN2A-215ENST00000637393 CFTRP13569 1480 aa19.65■□□□□ 0.74
GRIN2A-215ENST00000637393 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
GRIN2A-215ENST00000637393 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
GRIN2A-215ENST00000637393 PRDM2Q13029 1718 aa19.56■□□□□ 0.72
GRIN2A-215ENST00000637393 ARAP1Q96P48 1450 aa19.53■□□□□ 0.72
GRIN2A-215ENST00000637393 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
GRIN2A-215ENST00000637393 IFT140Q96RY7 1462 aa19.5■□□□□ 0.71
GRIN2A-215ENST00000637393 WRNQ14191 1432 aaPredicted RBP eCLIP19.42■□□□□ 0.7
GRIN2A-215ENST00000637393 EIF4G3O43432 1585 aaKnown RBP19.4■□□□□ 0.7
GRIN2A-215ENST00000637393 CHD1O14646 1710 aa19.38■□□□□ 0.69
GRIN2A-215ENST00000637393 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
GRIN2A-215ENST00000637393 TOPBP1Q92547 1522 aa19.33■□□□□ 0.68
GRIN2A-215ENST00000637393 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.68
GRIN2A-215ENST00000637393 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
GRIN2A-215ENST00000637393 AQRO60306 1485 aaKnown RBP eCLIP19.29■□□□□ 0.68
GRIN2A-215ENST00000637393 FBLN2P98095 1184 aa19.29■□□□□ 0.68
GRIN2A-215ENST00000637393 CUX1P39880 1505 aa19.24■□□□□ 0.67
GRIN2A-215ENST00000637393 TARBP1Q13395 1621 aaKnown RBP19.22■□□□□ 0.67
GRIN2A-215ENST00000637393 EEA1Q15075 1411 aa19.19■□□□□ 0.66
GRIN2A-215ENST00000637393 DNMBPQ6XZF7 1577 aa19.18■□□□□ 0.66
GRIN2A-215ENST00000637393 CLASP1Q7Z460 1538 aa19.17■□□□□ 0.66
GRIN2A-215ENST00000637393 SOGA1O94964 1423 aa19.12■□□□□ 0.65
GRIN2A-215ENST00000637393 FAM9AQ8IZU1 332 aaPredicted RBP19.11■□□□□ 0.65
GRIN2A-215ENST00000637393 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
GRIN2A-215ENST00000637393 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.64
GRIN2A-215ENST00000637393 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
GRIN2A-215ENST00000637393 SNAPC4Q5SXM2 1469 aa19.06■□□□□ 0.64
GRIN2A-215ENST00000637393 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
GRIN2A-215ENST00000637393 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
GRIN2A-215ENST00000637393 CHMP7Q8WUX9 453 aaPredicted RBP19.03■□□□□ 0.64
GRIN2A-215ENST00000637393 GAPVD1Q14C86 1478 aa19.02■□□□□ 0.63
GRIN2A-215ENST00000637393 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
GRIN2A-215ENST00000637393 CSRNP3Q8WYN3 585 aa19■□□□□ 0.63
GRIN2A-215ENST00000637393 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
GRIN2A-215ENST00000637393 KIF21BO75037 1637 aa18.96■□□□□ 0.63
GRIN2A-215ENST00000637393 WDR97A6NE52 1622 aa18.95■□□□□ 0.62
GRIN2A-215ENST00000637393 KIF27Q86VH2 1401 aa18.93■□□□□ 0.62
GRIN2A-215ENST00000637393 SYNJ2O15056 1496 aa18.93■□□□□ 0.62
GRIN2A-215ENST00000637393 ILDR1Q86SU0 546 aaPredicted RBP18.92■□□□□ 0.62
GRIN2A-215ENST00000637393 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
GRIN2A-215ENST00000637393 ABCA10Q8WWZ4 1543 aa18.89■□□□□ 0.61
GRIN2A-215ENST00000637393 GOLGA3Q08378 1498 aa18.88■□□□□ 0.61
GRIN2A-215ENST00000637393 ERCC6L2Q5T890 1561 aa18.83■□□□□ 0.6
GRIN2A-215ENST00000637393 ERICH3Q5RHP9 1530 aa18.83■□□□□ 0.6
GRIN2A-215ENST00000637393 TNIKQ9UKE5 1360 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms