RNA–Protein interactions for RNA: ENST00000637388.1

SNAPC4-202, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

TSL 5

Gene SNAPC4, Length 1,398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-202ENST00000637388 NISCHQ9Y2I1 1504 aa37.02■■■■□ 3.52
SNAPC4-202ENST00000637388 ABCC9O60706 1549 aa34.88■■■■□ 3.17
SNAPC4-202ENST00000637388 DNAJC5BQ9UF47 199 aa33.84■■■■□ 3.01
SNAPC4-202ENST00000637388 CCDC180Q9P1Z9 1646 aa33.71■■■□□ 2.99
SNAPC4-202ENST00000637388 RB1CC1Q8TDY2 1594 aa32.67■■■□□ 2.82
SNAPC4-202ENST00000637388 PABPN1Q86U42 306 aaKnown RBP eCLIP32.3■■■□□ 2.76
SNAPC4-202ENST00000637388 NACADO15069 1562 aa32.17■■■□□ 2.74
SNAPC4-202ENST00000637388 DNAJC5Q9H3Z4 198 aa31.93■■■□□ 2.7
SNAPC4-202ENST00000637388 UNC13AQ9UPW8 1703 aa31.91■■■□□ 2.7
SNAPC4-202ENST00000637388 BICRAQ9NZM4 1560 aa31.8■■■□□ 2.68
SNAPC4-202ENST00000637388 DCAF8L2P0C7V8 631 aa31.7■■■□□ 2.67
SNAPC4-202ENST00000637388 CECR2Q9BXF3 1484 aa31.56■■■□□ 2.64
SNAPC4-202ENST00000637388 CC2D2AQ9P2K1 1620 aa31.44■■■□□ 2.62
SNAPC4-202ENST00000637388 MYO15BQ96JP2 1530 aa31.36■■■□□ 2.61
SNAPC4-202ENST00000637388 SHROOM4Q9ULL8 1493 aa31.24■■■□□ 2.59
SNAPC4-202ENST00000637388 EIF4G1Q04637 1599 aaKnown RBP31.1■■■□□ 2.57
SNAPC4-202ENST00000637388 SCRIBQ14160 1630 aa30.63■■■□□ 2.49
SNAPC4-202ENST00000637388 CUX2O14529 1486 aa30.57■■■□□ 2.48
SNAPC4-202ENST00000637388 DCAF1Q9Y4B6 1507 aa30.51■■■□□ 2.48
SNAPC4-202ENST00000637388 ZCCHC6Q5VYS8 1495 aaKnown RBP30.43■■■□□ 2.46
SNAPC4-202ENST00000637388 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
SNAPC4-202ENST00000637388 TRIM41Q8WV44 630 aa29.99■■■□□ 2.39
SNAPC4-202ENST00000637388 NCAPD3P42695 1498 aa29.75■■■□□ 2.35
SNAPC4-202ENST00000637388 NESP48681 1621 aa29.64■■■□□ 2.34
SNAPC4-202ENST00000637388 THOC2Q8NI27 1593 aaKnown RBP29.58■■■□□ 2.33
SNAPC4-202ENST00000637388 ATAD2BQ9ULI0 1458 aa29.47■■■□□ 2.31
SNAPC4-202ENST00000637388 HMGXB3Q12766 1538 aa29.39■■■□□ 2.3
SNAPC4-202ENST00000637388 SMARCA2P51531 1590 aa29.3■■■□□ 2.28
SNAPC4-202ENST00000637388 LAMC3Q9Y6N6 1575 aa29.22■■■□□ 2.27
SNAPC4-202ENST00000637388 KIF21AQ7Z4S6 1674 aa29.18■■■□□ 2.26
SNAPC4-202ENST00000637388 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
SNAPC4-202ENST00000637388 PDS5BQ9NTI5 1447 aa29.1■■■□□ 2.25
SNAPC4-202ENST00000637388 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
SNAPC4-202ENST00000637388 BAZ1AQ9NRL2 1556 aaPredicted RBP29.01■■■□□ 2.23
SNAPC4-202ENST00000637388 OSCARQ8IYS5 282 aa28.96■■■□□ 2.23
SNAPC4-202ENST00000637388 MRC2Q9UBG0 1479 aa28.94■■■□□ 2.22
SNAPC4-202ENST00000637388 WDR62O43379 1518 aa28.9■■■□□ 2.22
SNAPC4-202ENST00000637388 PEG3Q9GZU2 1588 aa28.86■■■□□ 2.21
SNAPC4-202ENST00000637388 CADPSQ9ULU8 1353 aa28.77■■■□□ 2.2
SNAPC4-202ENST00000637388 RIMBP3CA6NJZ7 1639 aa28.71■■■□□ 2.19
SNAPC4-202ENST00000637388 RIMBP3BA6NNM3 1639 aa28.71■■■□□ 2.19
SNAPC4-202ENST00000637388 RIMBP3Q9UFD9 1639 aa28.71■■■□□ 2.19
SNAPC4-202ENST00000637388 CEP164Q9UPV0 1460 aa28.56■■■□□ 2.16
SNAPC4-202ENST00000637388 MROH2BQ7Z745 1585 aa28.52■■■□□ 2.16
SNAPC4-202ENST00000637388 ARHGEF11O15085 1522 aa28.51■■■□□ 2.15
SNAPC4-202ENST00000637388 AEBP2Q6ZN18 517 aaPredicted RBP28.45■■■□□ 2.14
SNAPC4-202ENST00000637388 FANCD2Q9BXW9 1451 aa28.44■■■□□ 2.14
SNAPC4-202ENST00000637388 TRHP20396 242 aaPredicted RBP28.41■■■□□ 2.14
SNAPC4-202ENST00000637388 CYB5RLQ6IPT4 315 aa28.37■■■□□ 2.13
SNAPC4-202ENST00000637388 URB2Q14146 1524 aaKnown RBP28.29■■■□□ 2.12
SNAPC4-202ENST00000637388 CFTRP13569 1480 aa28.2■■■□□ 2.1
SNAPC4-202ENST00000637388 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
SNAPC4-202ENST00000637388 ZNF608Q9ULD9 1512 aaPredicted RBP28.13■■■□□ 2.09
SNAPC4-202ENST00000637388 WIZO95785 1651 aa28.09■■■□□ 2.09
SNAPC4-202ENST00000637388 IFT140Q96RY7 1462 aa28.05■■■□□ 2.08
SNAPC4-202ENST00000637388 RSF1Q96T23 1441 aaPredicted RBP27.95■■■□□ 2.07
SNAPC4-202ENST00000637388 CHD1O14646 1710 aa27.89■■■□□ 2.05
SNAPC4-202ENST00000637388 EIF4G3O43432 1585 aaKnown RBP27.89■■■□□ 2.05
SNAPC4-202ENST00000637388 TOPBP1Q92547 1522 aa27.77■■■□□ 2.04
SNAPC4-202ENST00000637388 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
SNAPC4-202ENST00000637388 FBLN2P98095 1184 aa27.74■■■□□ 2.03
SNAPC4-202ENST00000637388 AQRO60306 1485 aaKnown RBP eCLIP27.73■■■□□ 2.031e-6■■■■□ 23.7
SNAPC4-202ENST00000637388 TOP2AP11388 1531 aaKnown RBP27.66■■■□□ 2.02
SNAPC4-202ENST00000637388 ABCC8Q09428 1581 aa27.61■■■□□ 2.01
SNAPC4-202ENST00000637388 TARBP1Q13395 1621 aaKnown RBP27.6■■■□□ 2.01
SNAPC4-202ENST00000637388 CLASP1Q7Z460 1538 aa27.59■■■□□ 2.01
SNAPC4-202ENST00000637388 DNMBPQ6XZF7 1577 aa27.55■■■□□ 2
SNAPC4-202ENST00000637388 ILDR1Q86SU0 546 aaPredicted RBP27.45■■□□□ 1.98
SNAPC4-202ENST00000637388 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
SNAPC4-202ENST00000637388 POLA1P09884 1462 aaPredicted RBP27.41■■□□□ 1.98
SNAPC4-202ENST00000637388 SNAPC4Q5SXM2 1469 aa27.4■■□□□ 1.98
SNAPC4-202ENST00000637388 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
SNAPC4-202ENST00000637388 CCDC88BA6NC98 1476 aa27.37■■□□□ 1.97
SNAPC4-202ENST00000637388 TDRD9Q8NDG6 1382 aaKnown RBP27.37■■□□□ 1.97
SNAPC4-202ENST00000637388 CHMP7Q8WUX9 453 aaPredicted RBP27.36■■□□□ 1.97
SNAPC4-202ENST00000637388 RAD54L2Q9Y4B4 1467 aa27.33■■□□□ 1.97
SNAPC4-202ENST00000637388 MAGI1Q96QZ7 1491 aaPredicted RBP27.28■■□□□ 1.96
SNAPC4-202ENST00000637388 SOGA1O94964 1423 aa27.25■■□□□ 1.95
SNAPC4-202ENST00000637388 WDR97A6NE52 1622 aa27.23■■□□□ 1.95
SNAPC4-202ENST00000637388 SYNJ2O15056 1496 aa27.21■■□□□ 1.95
SNAPC4-202ENST00000637388 GRIN2BQ13224 1484 aa27.16■■□□□ 1.94
SNAPC4-202ENST00000637388 KIF13AQ9H1H9 1805 aa27.08■■□□□ 1.93
SNAPC4-202ENST00000637388 ERCC6L2Q5T890 1561 aa27.07■■□□□ 1.92
SNAPC4-202ENST00000637388 KDM4FA0A1W2PPD8 638 aa27.07■■□□□ 1.92
SNAPC4-202ENST00000637388 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
SNAPC4-202ENST00000637388 PBRM1Q86U86 1689 aa26.93■■□□□ 1.9
SNAPC4-202ENST00000637388 CEP170Q5SW79 1584 aa26.9■■□□□ 1.9
SNAPC4-202ENST00000637388 CUX1P39880 1505 aa26.86■■□□□ 1.89
SNAPC4-202ENST00000637388 FAM69CQ0P6D2 419 aa26.82■■□□□ 1.88
SNAPC4-202ENST00000637388 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
SNAPC4-202ENST00000637388 ABCC10Q5T3U5 1492 aa26.8■■□□□ 1.88
SNAPC4-202ENST00000637388 NUP160Q12769 1436 aa26.79■■□□□ 1.88
SNAPC4-202ENST00000637388 SHROOM2Q13796 1616 aa26.78■■□□□ 1.88
SNAPC4-202ENST00000637388 KDM6BO15054 1643 aa26.74■■□□□ 1.87
SNAPC4-202ENST00000637388 ABCA5Q8WWZ7 1642 aa26.74■■□□□ 1.87
SNAPC4-202ENST00000637388 ABCA10Q8WWZ4 1543 aa26.69■■□□□ 1.86
SNAPC4-202ENST00000637388 DIP2BQ9P265 1576 aa26.69■■□□□ 1.86
SNAPC4-202ENST00000637388 MAPKBP1O60336 1514 aa26.65■■□□□ 1.86
SNAPC4-202ENST00000637388 ADAMTS12P58397 1594 aa26.63■■□□□ 1.85
SNAPC4-202ENST00000637388 PRG4Q92954 1404 aaPredicted RBP26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms