RNA–Protein interactions for RNA: ENST00000637359.1

FAM238A-202, Transcript of family with sequence similarity 238 member A, humanhuman

BASIC

Gene FAM238A, Length 442 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238A-202ENST00000637359 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.38
FAM238A-202ENST00000637359 ABCC9O60706 1549 aa21.9■■□□□ 1.1
FAM238A-202ENST00000637359 CCDC180Q9P1Z9 1646 aa21.39■■□□□ 1.01
FAM238A-202ENST00000637359 DNAJC5BQ9UF47 199 aa20.87■□□□□ 0.93
FAM238A-202ENST00000637359 RB1CC1Q8TDY2 1594 aa20.64■□□□□ 0.9
FAM238A-202ENST00000637359 NACADO15069 1562 aa20.38■□□□□ 0.85
FAM238A-202ENST00000637359 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
FAM238A-202ENST00000637359 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
FAM238A-202ENST00000637359 UNC13AQ9UPW8 1703 aa20.04■□□□□ 0.8
FAM238A-202ENST00000637359 BICRAQ9NZM4 1560 aa19.94■□□□□ 0.78
FAM238A-202ENST00000637359 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
FAM238A-202ENST00000637359 CECR2Q9BXF3 1484 aa19.78■□□□□ 0.76
FAM238A-202ENST00000637359 SHROOM4Q9ULL8 1493 aa19.72■□□□□ 0.75
FAM238A-202ENST00000637359 CC2D2AQ9P2K1 1620 aa19.71■□□□□ 0.75
FAM238A-202ENST00000637359 DNAJC5Q9H3Z4 198 aa19.57■□□□□ 0.72
FAM238A-202ENST00000637359 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
FAM238A-202ENST00000637359 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
FAM238A-202ENST00000637359 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
FAM238A-202ENST00000637359 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
FAM238A-202ENST00000637359 CUX2O14529 1486 aa19.06■□□□□ 0.64
FAM238A-202ENST00000637359 ERCC6Q03468 1493 aa19.02■□□□□ 0.63
FAM238A-202ENST00000637359 NCAPD3P42695 1498 aa18.8■□□□□ 0.6
FAM238A-202ENST00000637359 ATAD2BQ9ULI0 1458 aa18.68■□□□□ 0.58
FAM238A-202ENST00000637359 SMARCA2P51531 1590 aa18.64■□□□□ 0.57
FAM238A-202ENST00000637359 NESP48681 1621 aa18.63■□□□□ 0.57
FAM238A-202ENST00000637359 TRIM41Q8WV44 630 aa18.62■□□□□ 0.57
FAM238A-202ENST00000637359 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
FAM238A-202ENST00000637359 SMARCA4P51532 1647 aa18.52■□□□□ 0.56
FAM238A-202ENST00000637359 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.56
FAM238A-202ENST00000637359 THOC2Q8NI27 1593 aaKnown RBP18.5■□□□□ 0.55
FAM238A-202ENST00000637359 LAMC3Q9Y6N6 1575 aa18.47■□□□□ 0.55
FAM238A-202ENST00000637359 PDS5BQ9NTI5 1447 aa18.44■□□□□ 0.54
FAM238A-202ENST00000637359 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
FAM238A-202ENST00000637359 KIF21AQ7Z4S6 1674 aa18.35■□□□□ 0.53
FAM238A-202ENST00000637359 PEG3Q9GZU2 1588 aa18.32■□□□□ 0.52
FAM238A-202ENST00000637359 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
FAM238A-202ENST00000637359 CADPSQ9ULU8 1353 aa18.25■□□□□ 0.51
FAM238A-202ENST00000637359 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
FAM238A-202ENST00000637359 OSCARQ8IYS5 282 aa18.19■□□□□ 0.5
FAM238A-202ENST00000637359 WDR62O43379 1518 aa18.18■□□□□ 0.5
FAM238A-202ENST00000637359 CEP164Q9UPV0 1460 aa18.12■□□□□ 0.49
FAM238A-202ENST00000637359 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
FAM238A-202ENST00000637359 WIZO95785 1651 aa17.95■□□□□ 0.46
FAM238A-202ENST00000637359 CFTRP13569 1480 aa17.9■□□□□ 0.46
FAM238A-202ENST00000637359 RIMBP3CA6NJZ7 1639 aa17.89■□□□□ 0.45
FAM238A-202ENST00000637359 RIMBP3BA6NNM3 1639 aa17.89■□□□□ 0.45
FAM238A-202ENST00000637359 RIMBP3Q9UFD9 1639 aa17.89■□□□□ 0.45
FAM238A-202ENST00000637359 URB2Q14146 1524 aaKnown RBP17.86■□□□□ 0.45
FAM238A-202ENST00000637359 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
FAM238A-202ENST00000637359 CYB5RLQ6IPT4 315 aa17.8■□□□□ 0.44
FAM238A-202ENST00000637359 ARHGEF11O15085 1522 aa17.8■□□□□ 0.44
FAM238A-202ENST00000637359 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
FAM238A-202ENST00000637359 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
FAM238A-202ENST00000637359 ZNF608Q9ULD9 1512 aaPredicted RBP17.72■□□□□ 0.43
FAM238A-202ENST00000637359 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
FAM238A-202ENST00000637359 RSF1Q96T23 1441 aaPredicted RBP17.67■□□□□ 0.42
FAM238A-202ENST00000637359 FBLN2P98095 1184 aa17.66■□□□□ 0.42
FAM238A-202ENST00000637359 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
FAM238A-202ENST00000637359 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
FAM238A-202ENST00000637359 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
FAM238A-202ENST00000637359 EIF4G3O43432 1585 aaKnown RBP17.61■□□□□ 0.41
FAM238A-202ENST00000637359 ARAP1Q96P48 1450 aa17.57■□□□□ 0.4
FAM238A-202ENST00000637359 AQRO60306 1485 aaKnown RBP eCLIP17.55■□□□□ 0.4
FAM238A-202ENST00000637359 CHD1O14646 1710 aa17.54■□□□□ 0.4
FAM238A-202ENST00000637359 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
FAM238A-202ENST00000637359 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
FAM238A-202ENST00000637359 TARBP1Q13395 1621 aaKnown RBP17.44■□□□□ 0.38
FAM238A-202ENST00000637359 CHMP7Q8WUX9 453 aaPredicted RBP17.43■□□□□ 0.38
FAM238A-202ENST00000637359 POLA1P09884 1462 aaPredicted RBP17.41■□□□□ 0.38
FAM238A-202ENST00000637359 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
FAM238A-202ENST00000637359 SOGA1O94964 1423 aa17.38■□□□□ 0.37
FAM238A-202ENST00000637359 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
FAM238A-202ENST00000637359 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
FAM238A-202ENST00000637359 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
FAM238A-202ENST00000637359 CLASP1Q7Z460 1538 aa17.32■□□□□ 0.36
FAM238A-202ENST00000637359 MAGI1Q96QZ7 1491 aaPredicted RBP17.3■□□□□ 0.36
FAM238A-202ENST00000637359 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
FAM238A-202ENST00000637359 GRIN2BQ13224 1484 aa17.27■□□□□ 0.36
FAM238A-202ENST00000637359 SYNJ2O15056 1496 aa17.25■□□□□ 0.35
FAM238A-202ENST00000637359 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
FAM238A-202ENST00000637359 FGD5Q6ZNL6 1462 aa17.25■□□□□ 0.35
FAM238A-202ENST00000637359 CUX1P39880 1505 aa17.11■□□□□ 0.33
FAM238A-202ENST00000637359 PBRM1Q86U86 1689 aa17.1■□□□□ 0.33
FAM238A-202ENST00000637359 GRIN2AQ12879 1464 aa17.02■□□□□ 0.32
FAM238A-202ENST00000637359 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
FAM238A-202ENST00000637359 ERCC6L2Q5T890 1561 aa17.01■□□□□ 0.31
FAM238A-202ENST00000637359 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
FAM238A-202ENST00000637359 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
FAM238A-202ENST00000637359 NPM1P06748 294 aaKnown RBP eCLIP16.97■□□□□ 0.31
FAM238A-202ENST00000637359 NUP160Q12769 1436 aa16.95■□□□□ 0.3
FAM238A-202ENST00000637359 FAM69CQ0P6D2 419 aa16.94■□□□□ 0.3
FAM238A-202ENST00000637359 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
FAM238A-202ENST00000637359 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
FAM238A-202ENST00000637359 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
FAM238A-202ENST00000637359 KIF13AQ9H1H9 1805 aa16.9■□□□□ 0.3
FAM238A-202ENST00000637359 PRG4Q92954 1404 aaPredicted RBP16.89■□□□□ 0.29
FAM238A-202ENST00000637359 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
FAM238A-202ENST00000637359 JPH4Q96JJ6 628 aa16.86■□□□□ 0.29
FAM238A-202ENST00000637359 ABCC10Q5T3U5 1492 aa16.84■□□□□ 0.29
FAM238A-202ENST00000637359 ILDR1Q86SU0 546 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms