RNA–Protein interactions for RNA: ENST00000637348.1

CHRNA7-226, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,136 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-226ENST00000637348 NISCHQ9Y2I1 1504 aa28.45■■■□□ 2.15
CHRNA7-226ENST00000637348 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.66
CHRNA7-226ENST00000637348 ABCC9O60706 1549 aa25.33■■□□□ 1.65
CHRNA7-226ENST00000637348 RB1CC1Q8TDY2 1594 aa24.12■■□□□ 1.45
CHRNA7-226ENST00000637348 DCAF8L2P0C7V8 631 aa24■■□□□ 1.43
CHRNA7-226ENST00000637348 NACADO15069 1562 aa23.98■■□□□ 1.43
CHRNA7-226ENST00000637348 UNC13AQ9UPW8 1703 aa23.72■■□□□ 1.39
CHRNA7-226ENST00000637348 MYO15BQ96JP2 1530 aa23.65■■□□□ 1.38
CHRNA7-226ENST00000637348 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
CHRNA7-226ENST00000637348 PABPN1Q86U42 306 aaKnown RBP eCLIP23.62■■□□□ 1.37
CHRNA7-226ENST00000637348 DNAJC5BQ9UF47 199 aa23.6■■□□□ 1.37
CHRNA7-226ENST00000637348 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
CHRNA7-226ENST00000637348 DCAF1Q9Y4B6 1507 aa23.44■■□□□ 1.34
CHRNA7-226ENST00000637348 SCRIBQ14160 1630 aa23.29■■□□□ 1.32
CHRNA7-226ENST00000637348 SHROOM4Q9ULL8 1493 aa23.02■■□□□ 1.28
CHRNA7-226ENST00000637348 CC2D2AQ9P2K1 1620 aa22.89■■□□□ 1.25
CHRNA7-226ENST00000637348 EIF4G1Q04637 1599 aaKnown RBP22.85■■□□□ 1.25
CHRNA7-226ENST00000637348 CECR2Q9BXF3 1484 aa22.76■■□□□ 1.23
CHRNA7-226ENST00000637348 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
CHRNA7-226ENST00000637348 NCAPD3P42695 1498 aa22.13■■□□□ 1.13
CHRNA7-226ENST00000637348 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
CHRNA7-226ENST00000637348 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
CHRNA7-226ENST00000637348 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
CHRNA7-226ENST00000637348 HMGXB3Q12766 1538 aa22■■□□□ 1.11
CHRNA7-226ENST00000637348 MROH2BQ7Z745 1585 aa21.98■■□□□ 1.11
CHRNA7-226ENST00000637348 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
CHRNA7-226ENST00000637348 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
CHRNA7-226ENST00000637348 NESP48681 1621 aa21.84■■□□□ 1.09
CHRNA7-226ENST00000637348 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
CHRNA7-226ENST00000637348 WIZO95785 1651 aa21.76■■□□□ 1.07
CHRNA7-226ENST00000637348 CUX2O14529 1486 aa21.66■■□□□ 1.06
CHRNA7-226ENST00000637348 LAMC3Q9Y6N6 1575 aa21.62■■□□□ 1.05
CHRNA7-226ENST00000637348 KIF21AQ7Z4S6 1674 aa21.59■■□□□ 1.05
CHRNA7-226ENST00000637348 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
CHRNA7-226ENST00000637348 THOC2Q8NI27 1593 aaKnown RBP21.55■■□□□ 1.04
CHRNA7-226ENST00000637348 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
CHRNA7-226ENST00000637348 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
CHRNA7-226ENST00000637348 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.02
CHRNA7-226ENST00000637348 TOP2AP11388 1531 aaKnown RBP21.43■■□□□ 1.02
CHRNA7-226ENST00000637348 MRC2Q9UBG0 1479 aa21.31■■□□□ 1
CHRNA7-226ENST00000637348 CFTRP13569 1480 aa21.28■■□□□ 1
CHRNA7-226ENST00000637348 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
CHRNA7-226ENST00000637348 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
CHRNA7-226ENST00000637348 WDR62O43379 1518 aa21.26■□□□□ 0.99
CHRNA7-226ENST00000637348 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
CHRNA7-226ENST00000637348 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
CHRNA7-226ENST00000637348 URB2Q14146 1524 aaKnown RBP21.11■□□□□ 0.97
CHRNA7-226ENST00000637348 TOPBP1Q92547 1522 aa20.9■□□□□ 0.94
CHRNA7-226ENST00000637348 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.93
CHRNA7-226ENST00000637348 DNMBPQ6XZF7 1577 aa20.83■□□□□ 0.92
CHRNA7-226ENST00000637348 SUPT5HO00267 1087 aaKnown RBP20.81■□□□□ 0.92
CHRNA7-226ENST00000637348 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
CHRNA7-226ENST00000637348 ABCC8Q09428 1581 aa20.77■□□□□ 0.92
CHRNA7-226ENST00000637348 EIF4G3O43432 1585 aaKnown RBP20.72■□□□□ 0.91
CHRNA7-226ENST00000637348 OSCARQ8IYS5 282 aa20.71■□□□□ 0.91
CHRNA7-226ENST00000637348 TARBP1Q13395 1621 aaKnown RBP20.71■□□□□ 0.91
CHRNA7-226ENST00000637348 POLA1P09884 1462 aaPredicted RBP20.7■□□□□ 0.9
CHRNA7-226ENST00000637348 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
CHRNA7-226ENST00000637348 AQRO60306 1485 aaKnown RBP eCLIP20.66■□□□□ 0.9
CHRNA7-226ENST00000637348 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
CHRNA7-226ENST00000637348 CUX1P39880 1505 aa20.63■□□□□ 0.89
CHRNA7-226ENST00000637348 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
CHRNA7-226ENST00000637348 SOGA1O94964 1423 aa20.59■□□□□ 0.89
CHRNA7-226ENST00000637348 CHD1O14646 1710 aa20.58■□□□□ 0.89
CHRNA7-226ENST00000637348 TDRD9Q8NDG6 1382 aaKnown RBP20.56■□□□□ 0.88
CHRNA7-226ENST00000637348 RIMBP3CA6NJZ7 1639 aa20.51■□□□□ 0.87
CHRNA7-226ENST00000637348 RIMBP3BA6NNM3 1639 aa20.51■□□□□ 0.87
CHRNA7-226ENST00000637348 RIMBP3Q9UFD9 1639 aa20.51■□□□□ 0.87
CHRNA7-226ENST00000637348 FBLN2P98095 1184 aa20.49■□□□□ 0.87
CHRNA7-226ENST00000637348 WDR97A6NE52 1622 aa20.48■□□□□ 0.87
CHRNA7-226ENST00000637348 SNAPC4Q5SXM2 1469 aa20.45■□□□□ 0.86
CHRNA7-226ENST00000637348 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
CHRNA7-226ENST00000637348 PBRM1Q86U86 1689 aa20.4■□□□□ 0.86
CHRNA7-226ENST00000637348 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
CHRNA7-226ENST00000637348 SYNJ1O43426 1573 aa20.35■□□□□ 0.85
CHRNA7-226ENST00000637348 GAPVD1Q14C86 1478 aa20.35■□□□□ 0.85
CHRNA7-226ENST00000637348 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
CHRNA7-226ENST00000637348 MAGI1Q96QZ7 1491 aaPredicted RBP20.34■□□□□ 0.85
CHRNA7-226ENST00000637348 ABCA5Q8WWZ7 1642 aa20.34■□□□□ 0.85
CHRNA7-226ENST00000637348 BIVM-ERCC5R4GMW8 1640 aa20.34■□□□□ 0.85
CHRNA7-226ENST00000637348 TOP2BQ02880 1626 aa20.33■□□□□ 0.84
CHRNA7-226ENST00000637348 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
CHRNA7-226ENST00000637348 WRNQ14191 1432 aaPredicted RBP eCLIP20.32■□□□□ 0.84
CHRNA7-226ENST00000637348 SYNJ2O15056 1496 aa20.29■□□□□ 0.84
CHRNA7-226ENST00000637348 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.84
CHRNA7-226ENST00000637348 CYB5RLQ6IPT4 315 aa20.27■□□□□ 0.84
CHRNA7-226ENST00000637348 ARAP1Q96P48 1450 aa20.25■□□□□ 0.83
CHRNA7-226ENST00000637348 ADAMTS12P58397 1594 aa20.17■□□□□ 0.82
CHRNA7-226ENST00000637348 GRIN2AQ12879 1464 aa20.13■□□□□ 0.81
CHRNA7-226ENST00000637348 CEP170Q5SW79 1584 aa20.1■□□□□ 0.81
CHRNA7-226ENST00000637348 ERICH3Q5RHP9 1530 aa20.08■□□□□ 0.81
CHRNA7-226ENST00000637348 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
CHRNA7-226ENST00000637348 ERCC6L2Q5T890 1561 aa20.05■□□□□ 0.8
CHRNA7-226ENST00000637348 NUP160Q12769 1436 aa20.04■□□□□ 0.8
CHRNA7-226ENST00000637348 TRHP20396 242 aaPredicted RBP19.99■□□□□ 0.79
CHRNA7-226ENST00000637348 SHROOM2Q13796 1616 aa19.96■□□□□ 0.79
CHRNA7-226ENST00000637348 KIF27Q86VH2 1401 aa19.9■□□□□ 0.78
CHRNA7-226ENST00000637348 RUSC2Q8N2Y8 1516 aa19.88■□□□□ 0.77
CHRNA7-226ENST00000637348 IGF1RP08069 1367 aa19.88■□□□□ 0.77
CHRNA7-226ENST00000637348 PRG4Q92954 1404 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms