RNA–Protein interactions for RNA: ENST00000637258.1

CLCN2-218, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 4

Gene CLCN2, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-218ENST00000637258 NISCHQ9Y2I1 1504 aa39.91■■■■□ 3.98
CLCN2-218ENST00000637258 ABCC9O60706 1549 aa35.91■■■■□ 3.34
CLCN2-218ENST00000637258 CCDC180Q9P1Z9 1646 aa35.83■■■■□ 3.33
CLCN2-218ENST00000637258 RB1CC1Q8TDY2 1594 aa34.19■■■■□ 3.06
CLCN2-218ENST00000637258 NACADO15069 1562 aa33.98■■■■□ 3.03
CLCN2-218ENST00000637258 DNAJC5BQ9UF47 199 aa33.85■■■■□ 3.01
CLCN2-218ENST00000637258 DCAF8L2P0C7V8 631 aa33.74■■■□□ 2.99
CLCN2-218ENST00000637258 MYO15BQ96JP2 1530 aa33.55■■■□□ 2.96
CLCN2-218ENST00000637258 PABPN1Q86U42 306 aaKnown RBP eCLIP33.46■■■□□ 2.95
CLCN2-218ENST00000637258 UNC13AQ9UPW8 1703 aa33.25■■■□□ 2.91
CLCN2-218ENST00000637258 BICRAQ9NZM4 1560 aa33.14■■■□□ 2.9
CLCN2-218ENST00000637258 DCAF1Q9Y4B6 1507 aa33.04■■■□□ 2.88
CLCN2-218ENST00000637258 ZCCHC6Q5VYS8 1495 aaKnown RBP33.03■■■□□ 2.88
CLCN2-218ENST00000637258 SHROOM4Q9ULL8 1493 aa32.86■■■□□ 2.85
CLCN2-218ENST00000637258 SCRIBQ14160 1630 aa32.54■■■□□ 2.8
CLCN2-218ENST00000637258 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
CLCN2-218ENST00000637258 CECR2Q9BXF3 1484 aa32.42■■■□□ 2.78
CLCN2-218ENST00000637258 EIF4G1Q04637 1599 aaKnown RBP32.36■■■□□ 2.77
CLCN2-218ENST00000637258 NCAPD3P42695 1498 aa31.41■■■□□ 2.62
CLCN2-218ENST00000637258 DNAJC5Q9H3Z4 198 aa31.28■■■□□ 2.6
CLCN2-218ENST00000637258 ATAD2BQ9ULI0 1458 aa31.24■■■□□ 2.59
CLCN2-218ENST00000637258 SMARCA2P51531 1590 aa31.15■■■□□ 2.58
CLCN2-218ENST00000637258 CUX2O14529 1486 aa31.12■■■□□ 2.57
CLCN2-218ENST00000637258 SMARCA4P51532 1647 aa31.1■■■□□ 2.57
CLCN2-218ENST00000637258 HMGXB3Q12766 1538 aa31.09■■■□□ 2.57
CLCN2-218ENST00000637258 ERCC6Q03468 1493 aa31.06■■■□□ 2.56
CLCN2-218ENST00000637258 BAZ1AQ9NRL2 1556 aaPredicted RBP31■■■□□ 2.55
CLCN2-218ENST00000637258 BAZ1BQ9UIG0 1483 aaKnown RBP30.9■■■□□ 2.54
CLCN2-218ENST00000637258 PEG3Q9GZU2 1588 aa30.88■■■□□ 2.53
CLCN2-218ENST00000637258 NESP48681 1621 aa30.79■■■□□ 2.52
CLCN2-218ENST00000637258 MROH2BQ7Z745 1585 aa30.69■■■□□ 2.5
CLCN2-218ENST00000637258 LAMC3Q9Y6N6 1575 aa30.65■■■□□ 2.5
CLCN2-218ENST00000637258 PDS5BQ9NTI5 1447 aa30.56■■■□□ 2.48
CLCN2-218ENST00000637258 THOC2Q8NI27 1593 aaKnown RBP30.49■■■□□ 2.47
CLCN2-218ENST00000637258 CADPSQ9ULU8 1353 aa30.45■■■□□ 2.47
CLCN2-218ENST00000637258 KIF21AQ7Z4S6 1674 aa30.33■■■□□ 2.45
CLCN2-218ENST00000637258 WIZO95785 1651 aa30.26■■■□□ 2.43
CLCN2-218ENST00000637258 MRC2Q9UBG0 1479 aa30.21■■■□□ 2.43
CLCN2-218ENST00000637258 WDR62O43379 1518 aa30.13■■■□□ 2.41
CLCN2-218ENST00000637258 RSF1Q96T23 1441 aaPredicted RBP30.08■■■□□ 2.41
CLCN2-218ENST00000637258 CEP164Q9UPV0 1460 aa30.06■■■□□ 2.4
CLCN2-218ENST00000637258 CFTRP13569 1480 aa30.05■■■□□ 2.4
CLCN2-218ENST00000637258 FANCD2Q9BXW9 1451 aa30.02■■■□□ 2.4
CLCN2-218ENST00000637258 TOP2AP11388 1531 aaKnown RBP29.95■■■□□ 2.38
CLCN2-218ENST00000637258 OSCARQ8IYS5 282 aa29.74■■■□□ 2.35
CLCN2-218ENST00000637258 URB2Q14146 1524 aaKnown RBP29.74■■■□□ 2.35
CLCN2-218ENST00000637258 TRIM41Q8WV44 630 aa29.73■■■□□ 2.35
CLCN2-218ENST00000637258 CCDC88BA6NC98 1476 aa29.64■■■□□ 2.34
CLCN2-218ENST00000637258 PRDM2Q13029 1718 aa29.57■■■□□ 2.32
CLCN2-218ENST00000637258 IFT140Q96RY7 1462 aa29.52■■■□□ 2.32
CLCN2-218ENST00000637258 ABCC8Q09428 1581 aa29.48■■■□□ 2.31
CLCN2-218ENST00000637258 TOPBP1Q92547 1522 aa29.43■■■□□ 2.3
CLCN2-218ENST00000637258 ZNF608Q9ULD9 1512 aaPredicted RBP29.38■■■□□ 2.29
CLCN2-218ENST00000637258 DNMBPQ6XZF7 1577 aa29.3■■■□□ 2.28
CLCN2-218ENST00000637258 RIMBP3CA6NJZ7 1639 aa29.17■■■□□ 2.26
CLCN2-218ENST00000637258 RIMBP3BA6NNM3 1639 aa29.17■■■□□ 2.26
CLCN2-218ENST00000637258 RIMBP3Q9UFD9 1639 aa29.17■■■□□ 2.26
CLCN2-218ENST00000637258 EIF4G3O43432 1585 aaKnown RBP29.17■■■□□ 2.26
CLCN2-218ENST00000637258 AQRO60306 1485 aaKnown RBP eCLIP29.15■■■□□ 2.266e-6■■■■□ 25.1
CLCN2-218ENST00000637258 TARBP1Q13395 1621 aaKnown RBP29.14■■■□□ 2.26
CLCN2-218ENST00000637258 POLA1P09884 1462 aaPredicted RBP29.12■■■□□ 2.25
CLCN2-218ENST00000637258 ARHGEF11O15085 1522 aa29.11■■■□□ 2.25
CLCN2-218ENST00000637258 SOGA1O94964 1423 aa29.04■■■□□ 2.24
CLCN2-218ENST00000637258 FBLN2P98095 1184 aa29■■■□□ 2.23
CLCN2-218ENST00000637258 RAD54L2Q9Y4B4 1467 aa28.98■■■□□ 2.23
CLCN2-218ENST00000637258 CYB5RLQ6IPT4 315 aa28.98■■■□□ 2.23
CLCN2-218ENST00000637258 TDRD9Q8NDG6 1382 aaKnown RBP28.96■■■□□ 2.23
CLCN2-218ENST00000637258 WDR97A6NE52 1622 aa28.94■■■□□ 2.22
CLCN2-218ENST00000637258 CHD1O14646 1710 aa28.94■■■□□ 2.22
CLCN2-218ENST00000637258 FGD5Q6ZNL6 1462 aa28.9■■■□□ 2.22
CLCN2-218ENST00000637258 CUX1P39880 1505 aa28.84■■■□□ 2.21
CLCN2-218ENST00000637258 CHMP7Q8WUX9 453 aaPredicted RBP28.83■■■□□ 2.21
CLCN2-218ENST00000637258 SNAPC4Q5SXM2 1469 aa28.82■■■□□ 2.2
CLCN2-218ENST00000637258 MAGI1Q96QZ7 1491 aaPredicted RBP28.82■■■□□ 2.2
CLCN2-218ENST00000637258 ARAP1Q96P48 1450 aa28.81■■■□□ 2.2
CLCN2-218ENST00000637258 GRIN2BQ13224 1484 aa28.79■■■□□ 2.2
CLCN2-218ENST00000637258 SYNJ2O15056 1496 aa28.71■■■□□ 2.19
CLCN2-218ENST00000637258 SYNJ1O43426 1573 aa28.71■■■□□ 2.19
CLCN2-218ENST00000637258 CLASP1Q7Z460 1538 aa28.7■■■□□ 2.19
CLCN2-218ENST00000637258 TRHP20396 242 aaPredicted RBP28.67■■■□□ 2.18
CLCN2-218ENST00000637258 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
CLCN2-218ENST00000637258 ABCA10Q8WWZ4 1543 aa28.63■■■□□ 2.17
CLCN2-218ENST00000637258 SUPT5HO00267 1087 aaKnown RBP28.62■■■□□ 2.17
CLCN2-218ENST00000637258 WRNQ14191 1432 aaPredicted RBP eCLIP28.52■■■□□ 2.16
CLCN2-218ENST00000637258 PBRM1Q86U86 1689 aa28.51■■■□□ 2.16
CLCN2-218ENST00000637258 ABCA5Q8WWZ7 1642 aa28.51■■■□□ 2.15
CLCN2-218ENST00000637258 GRIN2AQ12879 1464 aa28.39■■■□□ 2.13
CLCN2-218ENST00000637258 TOP2BQ02880 1626 aa28.37■■■□□ 2.13
CLCN2-218ENST00000637258 BIVM-ERCC5R4GMW8 1640 aa28.34■■■□□ 2.13
CLCN2-218ENST00000637258 NUP160Q12769 1436 aa28.34■■■□□ 2.13
CLCN2-218ENST00000637258 FHAD1B1AJZ9 1412 aa28.33■■■□□ 2.13
CLCN2-218ENST00000637258 ADAMTS12P58397 1594 aa28.29■■■□□ 2.12
CLCN2-218ENST00000637258 ERICH3Q5RHP9 1530 aa28.27■■■□□ 2.12
CLCN2-218ENST00000637258 CEP170Q5SW79 1584 aa28.23■■■□□ 2.11
CLCN2-218ENST00000637258 ERCC6L2Q5T890 1561 aa28.17■■■□□ 2.1
CLCN2-218ENST00000637258 SHROOM2Q13796 1616 aa28.16■■■□□ 2.1
CLCN2-218ENST00000637258 JPH4Q96JJ6 628 aa28.11■■■□□ 2.09
CLCN2-218ENST00000637258 PRG4Q92954 1404 aaPredicted RBP28.05■■■□□ 2.08
CLCN2-218ENST00000637258 AEBP2Q6ZN18 517 aaPredicted RBP27.96■■■□□ 2.07
CLCN2-218ENST00000637258 IGF1RP08069 1367 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms