RNA–Protein interactions for RNA: ENST00000637241.1

CHRNA2-212, Transcript of cholinergic receptor nicotinic alpha 2 subunit, humanhuman

TSL 5

Gene CHRNA2, Length 1,858 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA2-212ENST00000637241 NISCHQ9Y2I1 1504 aa29.13■■■□□ 2.25
CHRNA2-212ENST00000637241 CCDC180Q9P1Z9 1646 aa25.87■■□□□ 1.73
CHRNA2-212ENST00000637241 ABCC9O60706 1549 aa25.45■■□□□ 1.67
CHRNA2-212ENST00000637241 DCAF8L2P0C7V8 631 aa24.47■■□□□ 1.51
CHRNA2-212ENST00000637241 RB1CC1Q8TDY2 1594 aa24.38■■□□□ 1.49
CHRNA2-212ENST00000637241 NACADO15069 1562 aa24.32■■□□□ 1.48
CHRNA2-212ENST00000637241 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
CHRNA2-212ENST00000637241 MYO15BQ96JP2 1530 aa24.11■■□□□ 1.45
CHRNA2-212ENST00000637241 DCAF1Q9Y4B6 1507 aa24.02■■□□□ 1.44
CHRNA2-212ENST00000637241 UNC13AQ9UPW8 1703 aa23.94■■□□□ 1.42
CHRNA2-212ENST00000637241 PABPN1Q86U42 306 aaKnown RBP eCLIP23.81■■□□□ 1.4
CHRNA2-212ENST00000637241 SCRIBQ14160 1630 aa23.72■■□□□ 1.39
CHRNA2-212ENST00000637241 BICRAQ9NZM4 1560 aa23.69■■□□□ 1.38
CHRNA2-212ENST00000637241 DNAJC5BQ9UF47 199 aa23.41■■□□□ 1.34
CHRNA2-212ENST00000637241 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
CHRNA2-212ENST00000637241 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
CHRNA2-212ENST00000637241 CC2D2AQ9P2K1 1620 aa22.99■■□□□ 1.27
CHRNA2-212ENST00000637241 CECR2Q9BXF3 1484 aa22.82■■□□□ 1.24
CHRNA2-212ENST00000637241 SMARCA4P51532 1647 aa22.63■■□□□ 1.21
CHRNA2-212ENST00000637241 BAZ1AQ9NRL2 1556 aaPredicted RBP22.56■■□□□ 1.2
CHRNA2-212ENST00000637241 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
CHRNA2-212ENST00000637241 ATAD2BQ9ULI0 1458 aa22.5■■□□□ 1.19
CHRNA2-212ENST00000637241 NCAPD3P42695 1498 aa22.45■■□□□ 1.18
CHRNA2-212ENST00000637241 SMARCA2P51531 1590 aa22.43■■□□□ 1.18
CHRNA2-212ENST00000637241 PEG3Q9GZU2 1588 aa22.35■■□□□ 1.17
CHRNA2-212ENST00000637241 HMGXB3Q12766 1538 aa22.34■■□□□ 1.17
CHRNA2-212ENST00000637241 BAZ1BQ9UIG0 1483 aaKnown RBP22.32■■□□□ 1.16
CHRNA2-212ENST00000637241 WIZO95785 1651 aa22.29■■□□□ 1.16
CHRNA2-212ENST00000637241 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
CHRNA2-212ENST00000637241 NESP48681 1621 aa22.04■■□□□ 1.12
CHRNA2-212ENST00000637241 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
CHRNA2-212ENST00000637241 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
CHRNA2-212ENST00000637241 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
CHRNA2-212ENST00000637241 CADPSQ9ULU8 1353 aa21.82■■□□□ 1.08
CHRNA2-212ENST00000637241 KIF21AQ7Z4S6 1674 aa21.77■■□□□ 1.08
CHRNA2-212ENST00000637241 CCDC88BA6NC98 1476 aa21.74■■□□□ 1.07
CHRNA2-212ENST00000637241 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
CHRNA2-212ENST00000637241 PDS5BQ9NTI5 1447 aa21.71■■□□□ 1.07
CHRNA2-212ENST00000637241 CFTRP13569 1480 aa21.68■■□□□ 1.06
CHRNA2-212ENST00000637241 THOC2Q8NI27 1593 aaKnown RBP21.65■■□□□ 1.06
CHRNA2-212ENST00000637241 CUX2O14529 1486 aa21.6■■□□□ 1.05
CHRNA2-212ENST00000637241 FANCD2Q9BXW9 1451 aa21.6■■□□□ 1.05
CHRNA2-212ENST00000637241 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
CHRNA2-212ENST00000637241 PRDM2Q13029 1718 aa21.55■■□□□ 1.04
CHRNA2-212ENST00000637241 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.04
CHRNA2-212ENST00000637241 WDR62O43379 1518 aa21.44■■□□□ 1.02
CHRNA2-212ENST00000637241 URB2Q14146 1524 aaKnown RBP21.4■■□□□ 1.02
CHRNA2-212ENST00000637241 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
CHRNA2-212ENST00000637241 DNMBPQ6XZF7 1577 aa21.2■□□□□ 0.98
CHRNA2-212ENST00000637241 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
CHRNA2-212ENST00000637241 CUX1P39880 1505 aa21.1■□□□□ 0.97
CHRNA2-212ENST00000637241 IFT140Q96RY7 1462 aa21.08■□□□□ 0.96
CHRNA2-212ENST00000637241 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
CHRNA2-212ENST00000637241 ZNF608Q9ULD9 1512 aaPredicted RBP21.07■□□□□ 0.96
CHRNA2-212ENST00000637241 FGD5Q6ZNL6 1462 aa21.03■□□□□ 0.96
CHRNA2-212ENST00000637241 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
CHRNA2-212ENST00000637241 TARBP1Q13395 1621 aaKnown RBP21.02■□□□□ 0.96
CHRNA2-212ENST00000637241 DNAJC5Q9H3Z4 198 aa21.02■□□□□ 0.96
CHRNA2-212ENST00000637241 SOGA1O94964 1423 aa20.97■□□□□ 0.95
CHRNA2-212ENST00000637241 EIF4G3O43432 1585 aaKnown RBP20.96■□□□□ 0.95
CHRNA2-212ENST00000637241 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.94
CHRNA2-212ENST00000637241 WRNQ14191 1432 aaPredicted RBP eCLIP20.93■□□□□ 0.94
CHRNA2-212ENST00000637241 SYNJ1O43426 1573 aa20.92■□□□□ 0.94
CHRNA2-212ENST00000637241 TDRD9Q8NDG6 1382 aaKnown RBP20.91■□□□□ 0.94
CHRNA2-212ENST00000637241 TOP2BQ02880 1626 aa20.88■□□□□ 0.93
CHRNA2-212ENST00000637241 BIVM-ERCC5R4GMW8 1640 aa20.88■□□□□ 0.93
CHRNA2-212ENST00000637241 WDR97A6NE52 1622 aa20.85■□□□□ 0.93
CHRNA2-212ENST00000637241 ABCA10Q8WWZ4 1543 aa20.77■□□□□ 0.92
CHRNA2-212ENST00000637241 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
CHRNA2-212ENST00000637241 CHD1O14646 1710 aa20.74■□□□□ 0.91
CHRNA2-212ENST00000637241 FBLN2P98095 1184 aa20.73■□□□□ 0.91
CHRNA2-212ENST00000637241 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
CHRNA2-212ENST00000637241 SNAPC4Q5SXM2 1469 aa20.73■□□□□ 0.91
CHRNA2-212ENST00000637241 PBRM1Q86U86 1689 aa20.73■□□□□ 0.91
CHRNA2-212ENST00000637241 ABCA5Q8WWZ7 1642 aa20.72■□□□□ 0.91
CHRNA2-212ENST00000637241 GRIN2BQ13224 1484 aa20.71■□□□□ 0.91
CHRNA2-212ENST00000637241 MAGI1Q96QZ7 1491 aaPredicted RBP20.64■□□□□ 0.89
CHRNA2-212ENST00000637241 CHMP7Q8WUX9 453 aaPredicted RBP20.6■□□□□ 0.89
CHRNA2-212ENST00000637241 SYNJ2O15056 1496 aa20.58■□□□□ 0.88
CHRNA2-212ENST00000637241 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
CHRNA2-212ENST00000637241 ERICH3Q5RHP9 1530 aa20.51■□□□□ 0.87
CHRNA2-212ENST00000637241 KIF27Q86VH2 1401 aa20.47■□□□□ 0.87
CHRNA2-212ENST00000637241 RIMBP3CA6NJZ7 1639 aa20.47■□□□□ 0.87
CHRNA2-212ENST00000637241 RIMBP3BA6NNM3 1639 aa20.47■□□□□ 0.87
CHRNA2-212ENST00000637241 RIMBP3Q9UFD9 1639 aa20.47■□□□□ 0.87
CHRNA2-212ENST00000637241 FHAD1B1AJZ9 1412 aa20.46■□□□□ 0.87
CHRNA2-212ENST00000637241 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
CHRNA2-212ENST00000637241 ARHGEF11O15085 1522 aa20.44■□□□□ 0.86
CHRNA2-212ENST00000637241 CLASP1Q7Z460 1538 aa20.44■□□□□ 0.86
CHRNA2-212ENST00000637241 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
CHRNA2-212ENST00000637241 IGF1RP08069 1367 aa20.41■□□□□ 0.86
CHRNA2-212ENST00000637241 CEP170Q5SW79 1584 aa20.4■□□□□ 0.86
CHRNA2-212ENST00000637241 RUSC2Q8N2Y8 1516 aa20.39■□□□□ 0.85
CHRNA2-212ENST00000637241 NUP160Q12769 1436 aa20.35■□□□□ 0.85
CHRNA2-212ENST00000637241 CUL7Q14999 1698 aa20.34■□□□□ 0.85
CHRNA2-212ENST00000637241 CYB5RLQ6IPT4 315 aa20.29■□□□□ 0.84
CHRNA2-212ENST00000637241 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
CHRNA2-212ENST00000637241 ARAP1Q96P48 1450 aa20.28■□□□□ 0.84
CHRNA2-212ENST00000637241 ERCC6L2Q5T890 1561 aa20.25■□□□□ 0.83
CHRNA2-212ENST00000637241 SHROOM2Q13796 1616 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms