RNA–Protein interactions for RNA: ENST00000637220.1

FOXG1-206, Transcript of forkhead box G1, humanhuman

TSL 5

Gene FOXG1, Length 147 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1-206ENST00000637220 NISCHQ9Y2I1 1504 aa17.24■□□□□ 0.35
FOXG1-206ENST00000637220 CCDC180Q9P1Z9 1646 aa14.93□□□□□ -0.02
FOXG1-206ENST00000637220 ZCCHC6Q5VYS8 1495 aaKnown RBP14.49□□□□□ -0.09
FOXG1-206ENST00000637220 DCAF8L2P0C7V8 631 aa14.32□□□□□ -0.12
FOXG1-206ENST00000637220 DCAF1Q9Y4B6 1507 aa14.3□□□□□ -0.12
FOXG1-206ENST00000637220 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
FOXG1-206ENST00000637220 MYO15BQ96JP2 1530 aa14.12□□□□□ -0.15
FOXG1-206ENST00000637220 ABCC9O60706 1549 aa14.08□□□□□ -0.16
FOXG1-206ENST00000637220 NACADO15069 1562 aa13.98□□□□□ -0.17
FOXG1-206ENST00000637220 RB1CC1Q8TDY2 1594 aa13.83□□□□□ -0.2
FOXG1-206ENST00000637220 SCRIBQ14160 1630 aa13.73□□□□□ -0.21
FOXG1-206ENST00000637220 SUPT5HO00267 1087 aaKnown RBP13.71□□□□□ -0.21
FOXG1-206ENST00000637220 RSF1Q96T23 1441 aaPredicted RBP13.43□□□□□ -0.26
FOXG1-206ENST00000637220 BAZ1AQ9NRL2 1556 aaPredicted RBP13.33□□□□□ -0.28
FOXG1-206ENST00000637220 PABPN1Q86U42 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
FOXG1-206ENST00000637220 CECR2Q9BXF3 1484 aa13.33□□□□□ -0.28
FOXG1-206ENST00000637220 MROH2BQ7Z745 1585 aa13.27□□□□□ -0.29
FOXG1-206ENST00000637220 BICRAQ9NZM4 1560 aa13.27□□□□□ -0.29
FOXG1-206ENST00000637220 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
FOXG1-206ENST00000637220 SMARCA4P51532 1647 aa13.18□□□□□ -0.3
FOXG1-206ENST00000637220 CHIC1Q5VXU3 224 aa13.16□□□□□ -0.3
FOXG1-206ENST00000637220 WIZO95785 1651 aa13.1□□□□□ -0.31
FOXG1-206ENST00000637220 TOP2AP11388 1531 aaKnown RBP13.08□□□□□ -0.31
FOXG1-206ENST00000637220 PEG3Q9GZU2 1588 aa13.05□□□□□ -0.32
FOXG1-206ENST00000637220 SMARCA2P51531 1590 aa13.03□□□□□ -0.32
FOXG1-206ENST00000637220 ATAD2BQ9ULI0 1458 aa13.01□□□□□ -0.33
FOXG1-206ENST00000637220 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
FOXG1-206ENST00000637220 TRIM41Q8WV44 630 aa12.96□□□□□ -0.33
FOXG1-206ENST00000637220 CCDC88BA6NC98 1476 aa12.96□□□□□ -0.34
FOXG1-206ENST00000637220 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
FOXG1-206ENST00000637220 NCAPD3P42695 1498 aa12.92□□□□□ -0.34
FOXG1-206ENST00000637220 HMGXB3Q12766 1538 aa12.87□□□□□ -0.35
FOXG1-206ENST00000637220 CC2D2AQ9P2K1 1620 aa12.69□□□□□ -0.38
FOXG1-206ENST00000637220 WRNQ14191 1432 aaPredicted RBP eCLIP12.68□□□□□ -0.38
FOXG1-206ENST00000637220 FAM9AQ8IZU1 332 aaPredicted RBP12.64□□□□□ -0.39
FOXG1-206ENST00000637220 CFTRP13569 1480 aa12.64□□□□□ -0.39
FOXG1-206ENST00000637220 EEA1Q15075 1411 aa12.63□□□□□ -0.39
FOXG1-206ENST00000637220 ABCC8Q09428 1581 aa12.63□□□□□ -0.39
FOXG1-206ENST00000637220 CADPSQ9ULU8 1353 aa12.62□□□□□ -0.39
FOXG1-206ENST00000637220 LOC105371045A0A1W2PR82 267 aa12.62□□□□□ -0.39
FOXG1-206ENST00000637220 CSRNP3Q8WYN3 585 aa12.53□□□□□ -0.4
FOXG1-206ENST00000637220 SOGA1O94964 1423 aa12.49□□□□□ -0.41
FOXG1-206ENST00000637220 SYNJ1O43426 1573 aa12.48□□□□□ -0.41
FOXG1-206ENST00000637220 TOP2BQ02880 1626 aa12.48□□□□□ -0.41
FOXG1-206ENST00000637220 FANCD2Q9BXW9 1451 aa12.44□□□□□ -0.42
FOXG1-206ENST00000637220 PDS5BQ9NTI5 1447 aa12.44□□□□□ -0.42
FOXG1-206ENST00000637220 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
FOXG1-206ENST00000637220 BIVM-ERCC5R4GMW8 1640 aa12.42□□□□□ -0.42
FOXG1-206ENST00000637220 CUX1P39880 1505 aa12.42□□□□□ -0.42
FOXG1-206ENST00000637220 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
FOXG1-206ENST00000637220 CEP164Q9UPV0 1460 aa12.4□□□□□ -0.42
FOXG1-206ENST00000637220 KIF27Q86VH2 1401 aa12.4□□□□□ -0.42
FOXG1-206ENST00000637220 UBTFP17480 764 aaKnown RBP12.4□□□□□ -0.42
FOXG1-206ENST00000637220 GOLGA3Q08378 1498 aa12.4□□□□□ -0.43
FOXG1-206ENST00000637220 TNIKQ9UKE5 1360 aa12.39□□□□□ -0.43
FOXG1-206ENST00000637220 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
FOXG1-206ENST00000637220 RUSC2Q8N2Y8 1516 aa12.37□□□□□ -0.43
FOXG1-206ENST00000637220 NESP48681 1621 aa12.33□□□□□ -0.44
FOXG1-206ENST00000637220 DNMBPQ6XZF7 1577 aa12.31□□□□□ -0.44
FOXG1-206ENST00000637220 KIF21BO75037 1637 aa12.31□□□□□ -0.44
FOXG1-206ENST00000637220 FGD5Q6ZNL6 1462 aa12.3□□□□□ -0.44
FOXG1-206ENST00000637220 DNAJC5BQ9UF47 199 aa12.29□□□□□ -0.44
FOXG1-206ENST00000637220 CEP162Q5TB80 1403 aa12.28□□□□□ -0.44
FOXG1-206ENST00000637220 CUX2O14529 1486 aa12.28□□□□□ -0.44
FOXG1-206ENST00000637220 TOPBP1Q92547 1522 aa12.28□□□□□ -0.44
FOXG1-206ENST00000637220 PRXQ9BXM0 1461 aa12.27□□□□□ -0.45
FOXG1-206ENST00000637220 TRIM26Q12899 539 aaPredicted RBP12.26□□□□□ -0.45
FOXG1-206ENST00000637220 ERICH3Q5RHP9 1530 aa12.26□□□□□ -0.45
FOXG1-206ENST00000637220 IGF1RP08069 1367 aa12.23□□□□□ -0.45
FOXG1-206ENST00000637220 ABCA10Q8WWZ4 1543 aa12.22□□□□□ -0.45
FOXG1-206ENST00000637220 POLA1P09884 1462 aaPredicted RBP12.22□□□□□ -0.45
FOXG1-206ENST00000637220 RAPGEF2Q9Y4G8 1499 aa12.22□□□□□ -0.45
FOXG1-206ENST00000637220 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.45
FOXG1-206ENST00000637220 PCGF6Q9BYE7 350 aa12.21□□□□□ -0.45
FOXG1-206ENST00000637220 CLIP1P30622 1438 aa12.2□□□□□ -0.46
FOXG1-206ENST00000637220 MRC2Q9UBG0 1479 aa12.2□□□□□ -0.46
FOXG1-206ENST00000637220 CARMIL1Q5VZK9 1371 aa12.19□□□□□ -0.46
FOXG1-206ENST00000637220 RAD54L2Q9Y4B4 1467 aa12.17□□□□□ -0.46
FOXG1-206ENST00000637220 ERCC6Q03468 1493 aa12.15□□□□□ -0.46
FOXG1-206ENST00000637220 APLP2Q06481 763 aa12.15□□□□□ -0.46
FOXG1-206ENST00000637220 GAPVD1Q14C86 1478 aa12.1□□□□□ -0.47
FOXG1-206ENST00000637220 TDRD9Q8NDG6 1382 aaKnown RBP12.1□□□□□ -0.47
FOXG1-206ENST00000637220 VPS8Q8N3P4 1428 aa12.1□□□□□ -0.47
FOXG1-206ENST00000637220 KIF21AQ7Z4S6 1674 aa12.1□□□□□ -0.47
FOXG1-206ENST00000637220 IFT140Q96RY7 1462 aa12.09□□□□□ -0.47
FOXG1-206ENST00000637220 RANGAP1P46060 587 aaPredicted RBP12.09□□□□□ -0.47
FOXG1-206ENST00000637220 WDR62O43379 1518 aa12.07□□□□□ -0.48
FOXG1-206ENST00000637220 CUL7Q14999 1698 aa12.06□□□□□ -0.48
FOXG1-206ENST00000637220 WDR97A6NE52 1622 aa12.03□□□□□ -0.48
FOXG1-206ENST00000637220 ABCA5Q8WWZ7 1642 aa12.02□□□□□ -0.49
FOXG1-206ENST00000637220 GRIN2BQ13224 1484 aa12.02□□□□□ -0.49
FOXG1-206ENST00000637220 TARBP1Q13395 1621 aaKnown RBP12.01□□□□□ -0.49
FOXG1-206ENST00000637220 PPARGC1BQ86YN6 1023 aaKnown RBP12.01□□□□□ -0.49
FOXG1-206ENST00000637220 FHAD1B1AJZ9 1412 aa12.01□□□□□ -0.49
FOXG1-206ENST00000637220 ARAP1Q96P48 1450 aa11.98□□□□□ -0.49
FOXG1-206ENST00000637220 ARHGAP35Q9NRY4 1499 aa11.98□□□□□ -0.49
FOXG1-206ENST00000637220 AQRO60306 1485 aaKnown RBP eCLIP11.97□□□□□ -0.49
FOXG1-206ENST00000637220 EFCAB5A4FU69 1503 aa11.96□□□□□ -0.5
FOXG1-206ENST00000637220 HRCP23327 699 aa11.95□□□□□ -0.5
FOXG1-206ENST00000637220 THOC2Q8NI27 1593 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms