RNA–Protein interactions for RNA: ENST00000637078.1

CACNA1D-221, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 4

Gene CACNA1D, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-221ENST00000637078 NISCHQ9Y2I1 1504 aa22.69■■□□□ 1.22
CACNA1D-221ENST00000637078 ABCC9O60706 1549 aa20.7■□□□□ 0.9
CACNA1D-221ENST00000637078 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
CACNA1D-221ENST00000637078 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
CACNA1D-221ENST00000637078 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
CACNA1D-221ENST00000637078 NACADO15069 1562 aa19.45■□□□□ 0.7
CACNA1D-221ENST00000637078 UNC13AQ9UPW8 1703 aa19.26■□□□□ 0.67
CACNA1D-221ENST00000637078 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
CACNA1D-221ENST00000637078 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
CACNA1D-221ENST00000637078 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
CACNA1D-221ENST00000637078 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
CACNA1D-221ENST00000637078 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
CACNA1D-221ENST00000637078 ZCCHC6Q5VYS8 1495 aaKnown RBP18.77■□□□□ 0.6
CACNA1D-221ENST00000637078 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
CACNA1D-221ENST00000637078 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
CACNA1D-221ENST00000637078 CECR2Q9BXF3 1484 aa18.69■□□□□ 0.58
CACNA1D-221ENST00000637078 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
CACNA1D-221ENST00000637078 EIF4G1Q04637 1599 aaKnown RBP18.63■□□□□ 0.57
CACNA1D-221ENST00000637078 DNAJC5Q9H3Z4 198 aa18.17■□□□□ 0.5
CACNA1D-221ENST00000637078 CUX2O14529 1486 aa18■□□□□ 0.47
CACNA1D-221ENST00000637078 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
CACNA1D-221ENST00000637078 NCAPD3P42695 1498 aa17.91■□□□□ 0.46
CACNA1D-221ENST00000637078 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
CACNA1D-221ENST00000637078 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
CACNA1D-221ENST00000637078 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
CACNA1D-221ENST00000637078 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
CACNA1D-221ENST00000637078 NESP48681 1621 aa17.7■□□□□ 0.42
CACNA1D-221ENST00000637078 BAZ1BQ9UIG0 1483 aaKnown RBP17.67■□□□□ 0.42
CACNA1D-221ENST00000637078 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
CACNA1D-221ENST00000637078 THOC2Q8NI27 1593 aaKnown RBP17.65■□□□□ 0.42
CACNA1D-221ENST00000637078 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
CACNA1D-221ENST00000637078 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
CACNA1D-221ENST00000637078 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
CACNA1D-221ENST00000637078 PDS5BQ9NTI5 1447 aa17.47■□□□□ 0.39
CACNA1D-221ENST00000637078 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
CACNA1D-221ENST00000637078 MRC2Q9UBG0 1479 aa17.36■□□□□ 0.37
CACNA1D-221ENST00000637078 CADPSQ9ULU8 1353 aa17.34■□□□□ 0.37
CACNA1D-221ENST00000637078 WDR62O43379 1518 aa17.33■□□□□ 0.37
CACNA1D-221ENST00000637078 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
CACNA1D-221ENST00000637078 WIZO95785 1651 aa17.28■□□□□ 0.36
CACNA1D-221ENST00000637078 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
CACNA1D-221ENST00000637078 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
CACNA1D-221ENST00000637078 CFTRP13569 1480 aa17.12■□□□□ 0.33
CACNA1D-221ENST00000637078 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
CACNA1D-221ENST00000637078 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
CACNA1D-221ENST00000637078 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
CACNA1D-221ENST00000637078 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
CACNA1D-221ENST00000637078 RSF1Q96T23 1441 aaPredicted RBP16.99■□□□□ 0.31
CACNA1D-221ENST00000637078 RIMBP3CA6NJZ7 1639 aa16.95■□□□□ 0.3
CACNA1D-221ENST00000637078 RIMBP3BA6NNM3 1639 aa16.95■□□□□ 0.3
CACNA1D-221ENST00000637078 RIMBP3Q9UFD9 1639 aa16.95■□□□□ 0.3
CACNA1D-221ENST00000637078 IFT140Q96RY7 1462 aa16.9■□□□□ 0.3
CACNA1D-221ENST00000637078 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
CACNA1D-221ENST00000637078 ARHGEF11O15085 1522 aa16.85■□□□□ 0.29
CACNA1D-221ENST00000637078 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
CACNA1D-221ENST00000637078 TOPBP1Q92547 1522 aa16.83■□□□□ 0.28
CACNA1D-221ENST00000637078 CCDC88BA6NC98 1476 aa16.8■□□□□ 0.28
CACNA1D-221ENST00000637078 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
CACNA1D-221ENST00000637078 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.28
CACNA1D-221ENST00000637078 CHD1O14646 1710 aa16.77■□□□□ 0.28
CACNA1D-221ENST00000637078 TARBP1Q13395 1621 aaKnown RBP16.71■□□□□ 0.27
CACNA1D-221ENST00000637078 CYB5RLQ6IPT4 315 aa16.66■□□□□ 0.26
CACNA1D-221ENST00000637078 AQRO60306 1485 aaKnown RBP eCLIP16.66■□□□□ 0.26
CACNA1D-221ENST00000637078 ARAP1Q96P48 1450 aa16.65■□□□□ 0.26
CACNA1D-221ENST00000637078 POLA1P09884 1462 aaPredicted RBP16.63■□□□□ 0.25
CACNA1D-221ENST00000637078 FBLN2P98095 1184 aa16.59■□□□□ 0.25
CACNA1D-221ENST00000637078 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
CACNA1D-221ENST00000637078 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
CACNA1D-221ENST00000637078 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
CACNA1D-221ENST00000637078 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
CACNA1D-221ENST00000637078 SYNJ1O43426 1573 aa16.53■□□□□ 0.24
CACNA1D-221ENST00000637078 CLASP1Q7Z460 1538 aa16.53■□□□□ 0.24
CACNA1D-221ENST00000637078 SOGA1O94964 1423 aa16.53■□□□□ 0.24
CACNA1D-221ENST00000637078 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
CACNA1D-221ENST00000637078 FGD5Q6ZNL6 1462 aa16.5■□□□□ 0.23
CACNA1D-221ENST00000637078 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
CACNA1D-221ENST00000637078 GRIN2BQ13224 1484 aa16.45■□□□□ 0.22
CACNA1D-221ENST00000637078 PBRM1Q86U86 1689 aa16.45■□□□□ 0.22
CACNA1D-221ENST00000637078 CHMP7Q8WUX9 453 aaPredicted RBP16.44■□□□□ 0.22
CACNA1D-221ENST00000637078 CUX1P39880 1505 aa16.44■□□□□ 0.22
CACNA1D-221ENST00000637078 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
CACNA1D-221ENST00000637078 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
CACNA1D-221ENST00000637078 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
CACNA1D-221ENST00000637078 ABCA10Q8WWZ4 1543 aa16.3■□□□□ 0.2
CACNA1D-221ENST00000637078 AEBP2Q6ZN18 517 aaPredicted RBP16.3■□□□□ 0.2
CACNA1D-221ENST00000637078 GRIN2AQ12879 1464 aa16.24■□□□□ 0.19
CACNA1D-221ENST00000637078 ADAMTS12P58397 1594 aa16.24■□□□□ 0.19
CACNA1D-221ENST00000637078 ERCC6L2Q5T890 1561 aa16.21■□□□□ 0.19
CACNA1D-221ENST00000637078 CEP170Q5SW79 1584 aa16.21■□□□□ 0.18
CACNA1D-221ENST00000637078 SHROOM2Q13796 1616 aa16.19■□□□□ 0.18
CACNA1D-221ENST00000637078 NUP160Q12769 1436 aa16.19■□□□□ 0.18
CACNA1D-221ENST00000637078 BIVM-ERCC5R4GMW8 1640 aa16.17■□□□□ 0.18
CACNA1D-221ENST00000637078 WRNQ14191 1432 aaPredicted RBP eCLIP16.17■□□□□ 0.18
CACNA1D-221ENST00000637078 TOP2BQ02880 1626 aa16.14■□□□□ 0.17
CACNA1D-221ENST00000637078 FHAD1B1AJZ9 1412 aa16.13■□□□□ 0.17
CACNA1D-221ENST00000637078 KIF13AQ9H1H9 1805 aa16.13■□□□□ 0.17
CACNA1D-221ENST00000637078 ERICH3Q5RHP9 1530 aa16.11■□□□□ 0.17
CACNA1D-221ENST00000637078 PRG4Q92954 1404 aaPredicted RBP16.02■□□□□ 0.16
CACNA1D-221ENST00000637078 RUSC2Q8N2Y8 1516 aa16.02■□□□□ 0.15
CACNA1D-221ENST00000637078 SUPT5HO00267 1087 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms