RNA–Protein interactions for RNA: ENST00000637063.1

KCNQ2-234, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5

Gene KCNQ2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-234ENST00000637063 NISCHQ9Y2I1 1504 aa33.79■■■■□ 3
KCNQ2-234ENST00000637063 ABCC9O60706 1549 aa30.63■■■□□ 2.49
KCNQ2-234ENST00000637063 CCDC180Q9P1Z9 1646 aa30.54■■■□□ 2.48
KCNQ2-234ENST00000637063 RB1CC1Q8TDY2 1594 aa29.16■■■□□ 2.26
KCNQ2-234ENST00000637063 DNAJC5BQ9UF47 199 aa29.01■■■□□ 2.23
KCNQ2-234ENST00000637063 NACADO15069 1562 aa28.92■■■□□ 2.22
KCNQ2-234ENST00000637063 MYO15BQ96JP2 1530 aa28.52■■■□□ 2.16
KCNQ2-234ENST00000637063 UNC13AQ9UPW8 1703 aa28.49■■■□□ 2.15
KCNQ2-234ENST00000637063 PABPN1Q86U42 306 aaKnown RBP eCLIP28.4■■■□□ 2.14
KCNQ2-234ENST00000637063 DCAF8L2P0C7V8 631 aa28.37■■■□□ 2.13
KCNQ2-234ENST00000637063 BICRAQ9NZM4 1560 aa28.32■■■□□ 2.12
KCNQ2-234ENST00000637063 SHROOM4Q9ULL8 1493 aa28.05■■■□□ 2.08
KCNQ2-234ENST00000637063 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
KCNQ2-234ENST00000637063 ZCCHC6Q5VYS8 1495 aaKnown RBP27.95■■■□□ 2.07
KCNQ2-234ENST00000637063 CC2D2AQ9P2K1 1620 aa27.74■■■□□ 2.03
KCNQ2-234ENST00000637063 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.02
KCNQ2-234ENST00000637063 EIF4G1Q04637 1599 aaKnown RBP27.64■■■□□ 2.01
KCNQ2-234ENST00000637063 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
KCNQ2-234ENST00000637063 DNAJC5Q9H3Z4 198 aa26.95■■□□□ 1.9
KCNQ2-234ENST00000637063 NCAPD3P42695 1498 aa26.69■■□□□ 1.86
KCNQ2-234ENST00000637063 CUX2O14529 1486 aa26.68■■□□□ 1.86
KCNQ2-234ENST00000637063 ATAD2BQ9ULI0 1458 aa26.52■■□□□ 1.84
KCNQ2-234ENST00000637063 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
KCNQ2-234ENST00000637063 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
KCNQ2-234ENST00000637063 SMARCA2P51531 1590 aa26.46■■□□□ 1.83
KCNQ2-234ENST00000637063 SMARCA4P51532 1647 aa26.42■■□□□ 1.82
KCNQ2-234ENST00000637063 PEG3Q9GZU2 1588 aa26.26■■□□□ 1.79
KCNQ2-234ENST00000637063 BAZ1AQ9NRL2 1556 aaPredicted RBP26.26■■□□□ 1.79
KCNQ2-234ENST00000637063 NESP48681 1621 aa26.24■■□□□ 1.79
KCNQ2-234ENST00000637063 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
KCNQ2-234ENST00000637063 THOC2Q8NI27 1593 aaKnown RBP26.15■■□□□ 1.78
KCNQ2-234ENST00000637063 LAMC3Q9Y6N6 1575 aa26.14■■□□□ 1.78
KCNQ2-234ENST00000637063 MROH2BQ7Z745 1585 aa25.98■■□□□ 1.75
KCNQ2-234ENST00000637063 PDS5BQ9NTI5 1447 aa25.96■■□□□ 1.75
KCNQ2-234ENST00000637063 KIF21AQ7Z4S6 1674 aa25.95■■□□□ 1.74
KCNQ2-234ENST00000637063 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
KCNQ2-234ENST00000637063 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
KCNQ2-234ENST00000637063 WDR62O43379 1518 aa25.73■■□□□ 1.71
KCNQ2-234ENST00000637063 WIZO95785 1651 aa25.63■■□□□ 1.69
KCNQ2-234ENST00000637063 CEP164Q9UPV0 1460 aa25.56■■□□□ 1.68
KCNQ2-234ENST00000637063 CFTRP13569 1480 aa25.49■■□□□ 1.67
KCNQ2-234ENST00000637063 FANCD2Q9BXW9 1451 aa25.49■■□□□ 1.67
KCNQ2-234ENST00000637063 TRIM41Q8WV44 630 aa25.45■■□□□ 1.66
KCNQ2-234ENST00000637063 TOP2AP11388 1531 aaKnown RBP25.35■■□□□ 1.65
KCNQ2-234ENST00000637063 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
KCNQ2-234ENST00000637063 OSCARQ8IYS5 282 aa25.31■■□□□ 1.64
KCNQ2-234ENST00000637063 URB2Q14146 1524 aaKnown RBP25.31■■□□□ 1.64
KCNQ2-234ENST00000637063 PRDM2Q13029 1718 aa25.25■■□□□ 1.63
KCNQ2-234ENST00000637063 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
KCNQ2-234ENST00000637063 RIMBP3CA6NJZ7 1639 aa25.04■■□□□ 1.6
KCNQ2-234ENST00000637063 RIMBP3BA6NNM3 1639 aa25.04■■□□□ 1.6
KCNQ2-234ENST00000637063 RIMBP3Q9UFD9 1639 aa25.04■■□□□ 1.6
KCNQ2-234ENST00000637063 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
KCNQ2-234ENST00000637063 ZNF608Q9ULD9 1512 aaPredicted RBP25.02■■□□□ 1.6
KCNQ2-234ENST00000637063 ABCC8Q09428 1581 aa24.99■■□□□ 1.59
KCNQ2-234ENST00000637063 TOPBP1Q92547 1522 aa24.99■■□□□ 1.59
KCNQ2-234ENST00000637063 ARHGEF11O15085 1522 aa24.95■■□□□ 1.58
KCNQ2-234ENST00000637063 EIF4G3O43432 1585 aaKnown RBP24.91■■□□□ 1.58
KCNQ2-234ENST00000637063 DNMBPQ6XZF7 1577 aa24.9■■□□□ 1.58
KCNQ2-234ENST00000637063 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.57
KCNQ2-234ENST00000637063 CHD1O14646 1710 aa24.77■■□□□ 1.56
KCNQ2-234ENST00000637063 AQRO60306 1485 aaKnown RBP eCLIP24.73■■□□□ 1.55
KCNQ2-234ENST00000637063 POLA1P09884 1462 aaPredicted RBP24.72■■□□□ 1.55
KCNQ2-234ENST00000637063 ARAP1Q96P48 1450 aa24.67■■□□□ 1.54
KCNQ2-234ENST00000637063 WDR97A6NE52 1622 aa24.66■■□□□ 1.54
KCNQ2-234ENST00000637063 CYB5RLQ6IPT4 315 aa24.66■■□□□ 1.54
KCNQ2-234ENST00000637063 RAD54L2Q9Y4B4 1467 aa24.56■■□□□ 1.52
KCNQ2-234ENST00000637063 SOGA1O94964 1423 aa24.55■■□□□ 1.52
KCNQ2-234ENST00000637063 CLASP1Q7Z460 1538 aa24.53■■□□□ 1.52
KCNQ2-234ENST00000637063 FBLN2P98095 1184 aa24.52■■□□□ 1.52
KCNQ2-234ENST00000637063 TDRD9Q8NDG6 1382 aaKnown RBP24.51■■□□□ 1.51
KCNQ2-234ENST00000637063 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
KCNQ2-234ENST00000637063 MAGI1Q96QZ7 1491 aaPredicted RBP24.5■■□□□ 1.51
KCNQ2-234ENST00000637063 FGD5Q6ZNL6 1462 aa24.49■■□□□ 1.51
KCNQ2-234ENST00000637063 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
KCNQ2-234ENST00000637063 CUX1P39880 1505 aa24.44■■□□□ 1.5
KCNQ2-234ENST00000637063 TRHP20396 242 aaPredicted RBP24.43■■□□□ 1.5
KCNQ2-234ENST00000637063 GRIN2BQ13224 1484 aa24.43■■□□□ 1.5
KCNQ2-234ENST00000637063 SYNJ2O15056 1496 aa24.4■■□□□ 1.5
KCNQ2-234ENST00000637063 CHMP7Q8WUX9 453 aaPredicted RBP24.37■■□□□ 1.49
KCNQ2-234ENST00000637063 PBRM1Q86U86 1689 aa24.31■■□□□ 1.48
KCNQ2-234ENST00000637063 GAPVD1Q14C86 1478 aa24.28■■□□□ 1.48
KCNQ2-234ENST00000637063 ABCA10Q8WWZ4 1543 aa24.26■■□□□ 1.47
KCNQ2-234ENST00000637063 ABCA5Q8WWZ7 1642 aa24.25■■□□□ 1.47
KCNQ2-234ENST00000637063 GRIN2AQ12879 1464 aa24.12■■□□□ 1.45
KCNQ2-234ENST00000637063 NUP160Q12769 1436 aa24.09■■□□□ 1.45
KCNQ2-234ENST00000637063 ADAMTS12P58397 1594 aa24.08■■□□□ 1.44
KCNQ2-234ENST00000637063 WRNQ14191 1432 aaPredicted RBP eCLIP24.06■■□□□ 1.44
KCNQ2-234ENST00000637063 SHROOM2Q13796 1616 aa24.04■■□□□ 1.44
KCNQ2-234ENST00000637063 CEP170Q5SW79 1584 aa24.03■■□□□ 1.44
KCNQ2-234ENST00000637063 ERCC6L2Q5T890 1561 aa24.03■■□□□ 1.44
KCNQ2-234ENST00000637063 BIVM-ERCC5R4GMW8 1640 aa24.02■■□□□ 1.44
KCNQ2-234ENST00000637063 TOP2BQ02880 1626 aa24.01■■□□□ 1.43
KCNQ2-234ENST00000637063 FHAD1B1AJZ9 1412 aa23.98■■□□□ 1.43
KCNQ2-234ENST00000637063 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
KCNQ2-234ENST00000637063 AEBP2Q6ZN18 517 aaPredicted RBP23.97■■□□□ 1.43
KCNQ2-234ENST00000637063 KIF13AQ9H1H9 1805 aa23.85■■□□□ 1.41
KCNQ2-234ENST00000637063 PRG4Q92954 1404 aaPredicted RBP23.78■■□□□ 1.4
KCNQ2-234ENST00000637063 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.4
KCNQ2-234ENST00000637063 RUSC2Q8N2Y8 1516 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms