RNA–Protein interactions for RNA: ENST00000636975.1

LINC01988-202, Transcript of long intergenic non-protein coding RNA 1988, humanhuman

TSL 5 BASIC

Gene LINC01988, Length 921 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01988-202ENST00000636975 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
LINC01988-202ENST00000636975 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
LINC01988-202ENST00000636975 ABCC9O60706 1549 aa26.75■■□□□ 1.87
LINC01988-202ENST00000636975 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
LINC01988-202ENST00000636975 NACADO15069 1562 aa25.52■■□□□ 1.68
LINC01988-202ENST00000636975 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
LINC01988-202ENST00000636975 MYO15BQ96JP2 1530 aa25.3■■□□□ 1.64
LINC01988-202ENST00000636975 ZCCHC6Q5VYS8 1495 aaKnown RBP25.23■■□□□ 1.63
LINC01988-202ENST00000636975 DCAF1Q9Y4B6 1507 aa25.1■■□□□ 1.61
LINC01988-202ENST00000636975 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
LINC01988-202ENST00000636975 PABPN1Q86U42 306 aaKnown RBP eCLIP24.96■■□□□ 1.59
LINC01988-202ENST00000636975 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
LINC01988-202ENST00000636975 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
LINC01988-202ENST00000636975 SCRIBQ14160 1630 aa24.69■■□□□ 1.54
LINC01988-202ENST00000636975 SHROOM4Q9ULL8 1493 aa24.56■■□□□ 1.52
LINC01988-202ENST00000636975 EIF4G1Q04637 1599 aaKnown RBP24.22■■□□□ 1.47
LINC01988-202ENST00000636975 CC2D2AQ9P2K1 1620 aa24.18■■□□□ 1.46
LINC01988-202ENST00000636975 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
LINC01988-202ENST00000636975 SMARCA4P51532 1647 aa23.6■■□□□ 1.37
LINC01988-202ENST00000636975 NCAPD3P42695 1498 aa23.57■■□□□ 1.36
LINC01988-202ENST00000636975 ATAD2BQ9ULI0 1458 aa23.55■■□□□ 1.36
LINC01988-202ENST00000636975 BAZ1AQ9NRL2 1556 aaPredicted RBP23.52■■□□□ 1.36
LINC01988-202ENST00000636975 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
LINC01988-202ENST00000636975 HMGXB3Q12766 1538 aa23.42■■□□□ 1.34
LINC01988-202ENST00000636975 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
LINC01988-202ENST00000636975 PEG3Q9GZU2 1588 aa23.38■■□□□ 1.33
LINC01988-202ENST00000636975 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
LINC01988-202ENST00000636975 WIZO95785 1651 aa23.13■■□□□ 1.29
LINC01988-202ENST00000636975 NESP48681 1621 aa23.09■■□□□ 1.29
LINC01988-202ENST00000636975 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
LINC01988-202ENST00000636975 RSF1Q96T23 1441 aaPredicted RBP23.04■■□□□ 1.28
LINC01988-202ENST00000636975 LAMC3Q9Y6N6 1575 aa22.97■■□□□ 1.27
LINC01988-202ENST00000636975 CUX2O14529 1486 aa22.92■■□□□ 1.26
LINC01988-202ENST00000636975 CADPSQ9ULU8 1353 aa22.87■■□□□ 1.25
LINC01988-202ENST00000636975 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
LINC01988-202ENST00000636975 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
LINC01988-202ENST00000636975 KIF21AQ7Z4S6 1674 aa22.78■■□□□ 1.24
LINC01988-202ENST00000636975 THOC2Q8NI27 1593 aaKnown RBP22.78■■□□□ 1.24
LINC01988-202ENST00000636975 CFTRP13569 1480 aa22.68■■□□□ 1.22
LINC01988-202ENST00000636975 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
LINC01988-202ENST00000636975 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
LINC01988-202ENST00000636975 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
LINC01988-202ENST00000636975 CEP164Q9UPV0 1460 aa22.59■■□□□ 1.21
LINC01988-202ENST00000636975 WDR62O43379 1518 aa22.56■■□□□ 1.2
LINC01988-202ENST00000636975 DNAJC5Q9H3Z4 198 aa22.53■■□□□ 1.2
LINC01988-202ENST00000636975 PRDM2Q13029 1718 aa22.46■■□□□ 1.19
LINC01988-202ENST00000636975 URB2Q14146 1524 aaKnown RBP22.4■■□□□ 1.18
LINC01988-202ENST00000636975 SUPT5HO00267 1087 aaKnown RBP22.24■■□□□ 1.15
LINC01988-202ENST00000636975 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
LINC01988-202ENST00000636975 ABCC8Q09428 1581 aa22.18■■□□□ 1.14
LINC01988-202ENST00000636975 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
LINC01988-202ENST00000636975 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
LINC01988-202ENST00000636975 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
LINC01988-202ENST00000636975 POLA1P09884 1462 aaPredicted RBP22.01■■□□□ 1.11
LINC01988-202ENST00000636975 TARBP1Q13395 1621 aaKnown RBP22■■□□□ 1.11
LINC01988-202ENST00000636975 CUX1P39880 1505 aa21.96■■□□□ 1.11
LINC01988-202ENST00000636975 EIF4G3O43432 1585 aaKnown RBP21.95■■□□□ 1.1
LINC01988-202ENST00000636975 FGD5Q6ZNL6 1462 aa21.92■■□□□ 1.1
LINC01988-202ENST00000636975 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
LINC01988-202ENST00000636975 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
LINC01988-202ENST00000636975 SOGA1O94964 1423 aa21.91■■□□□ 1.1
LINC01988-202ENST00000636975 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.1
LINC01988-202ENST00000636975 TDRD9Q8NDG6 1382 aaKnown RBP21.83■■□□□ 1.08
LINC01988-202ENST00000636975 WDR97A6NE52 1622 aa21.78■■□□□ 1.08
LINC01988-202ENST00000636975 CHD1O14646 1710 aa21.72■■□□□ 1.07
LINC01988-202ENST00000636975 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
LINC01988-202ENST00000636975 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.06
LINC01988-202ENST00000636975 SNAPC4Q5SXM2 1469 aa21.69■■□□□ 1.06
LINC01988-202ENST00000636975 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
LINC01988-202ENST00000636975 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
LINC01988-202ENST00000636975 GRIN2BQ13224 1484 aa21.68■■□□□ 1.06
LINC01988-202ENST00000636975 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
LINC01988-202ENST00000636975 FBLN2P98095 1184 aa21.67■■□□□ 1.06
LINC01988-202ENST00000636975 GAPVD1Q14C86 1478 aa21.65■■□□□ 1.06
LINC01988-202ENST00000636975 TRIM41Q8WV44 630 aa21.65■■□□□ 1.06
LINC01988-202ENST00000636975 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.06
LINC01988-202ENST00000636975 ABCA5Q8WWZ7 1642 aa21.62■■□□□ 1.05
LINC01988-202ENST00000636975 PBRM1Q86U86 1689 aa21.61■■□□□ 1.05
LINC01988-202ENST00000636975 RIMBP3CA6NJZ7 1639 aa21.6■■□□□ 1.05
LINC01988-202ENST00000636975 RIMBP3BA6NNM3 1639 aa21.6■■□□□ 1.05
LINC01988-202ENST00000636975 RIMBP3Q9UFD9 1639 aa21.6■■□□□ 1.05
LINC01988-202ENST00000636975 ARHGEF11O15085 1522 aa21.58■■□□□ 1.04
LINC01988-202ENST00000636975 CHMP7Q8WUX9 453 aaPredicted RBP21.57■■□□□ 1.04
LINC01988-202ENST00000636975 SYNJ2O15056 1496 aa21.57■■□□□ 1.04
LINC01988-202ENST00000636975 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
LINC01988-202ENST00000636975 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
LINC01988-202ENST00000636975 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
LINC01988-202ENST00000636975 GRIN2AQ12879 1464 aa21.41■■□□□ 1.02
LINC01988-202ENST00000636975 ARAP1Q96P48 1450 aa21.39■■□□□ 1.02
LINC01988-202ENST00000636975 FHAD1B1AJZ9 1412 aa21.39■■□□□ 1.02
LINC01988-202ENST00000636975 CYB5RLQ6IPT4 315 aa21.39■■□□□ 1.01
LINC01988-202ENST00000636975 NUP160Q12769 1436 aa21.33■■□□□ 1.01
LINC01988-202ENST00000636975 CEP170Q5SW79 1584 aa21.31■■□□□ 1
LINC01988-202ENST00000636975 KIF27Q86VH2 1401 aa21.28■■□□□ 1
LINC01988-202ENST00000636975 IGF1RP08069 1367 aa21.24■□□□□ 0.99
LINC01988-202ENST00000636975 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
LINC01988-202ENST00000636975 SHROOM2Q13796 1616 aa21.19■□□□□ 0.98
LINC01988-202ENST00000636975 CUL7Q14999 1698 aa21.16■□□□□ 0.98
LINC01988-202ENST00000636975 RUSC2Q8N2Y8 1516 aa21.13■□□□□ 0.97
LINC01988-202ENST00000636975 JPH4Q96JJ6 628 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms