RNA–Protein interactions for RNA: ENST00000636877.1

LINC02550-202, Transcript of long intergenic non-protein coding RNA 2550, humanhuman

TSL 5 BASIC

Gene LINC02550, Length 1,104 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02550-202ENST00000636877 NISCHQ9Y2I1 1504 aa25.42■■□□□ 1.66
LINC02550-202ENST00000636877 CCDC180Q9P1Z9 1646 aa22.56■■□□□ 1.2
LINC02550-202ENST00000636877 ABCC9O60706 1549 aa21.79■■□□□ 1.08
LINC02550-202ENST00000636877 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
LINC02550-202ENST00000636877 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
LINC02550-202ENST00000636877 NACADO15069 1562 aa21.04■□□□□ 0.96
LINC02550-202ENST00000636877 RB1CC1Q8TDY2 1594 aa21.04■□□□□ 0.96
LINC02550-202ENST00000636877 AEBP2Q6ZN18 517 aaPredicted RBP21.03■□□□□ 0.96
LINC02550-202ENST00000636877 DCAF1Q9Y4B6 1507 aa20.98■□□□□ 0.95
LINC02550-202ENST00000636877 MYO15BQ96JP2 1530 aa20.92■□□□□ 0.94
LINC02550-202ENST00000636877 UNC13AQ9UPW8 1703 aa20.8■□□□□ 0.92
LINC02550-202ENST00000636877 SCRIBQ14160 1630 aa20.67■□□□□ 0.9
LINC02550-202ENST00000636877 CHIC1Q5VXU3 224 aa20.64■□□□□ 0.89
LINC02550-202ENST00000636877 BICRAQ9NZM4 1560 aa20.44■□□□□ 0.86
LINC02550-202ENST00000636877 PABPN1Q86U42 306 aaKnown RBP eCLIP20.36■□□□□ 0.85
LINC02550-202ENST00000636877 SHROOM4Q9ULL8 1493 aa20.36■□□□□ 0.85
LINC02550-202ENST00000636877 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
LINC02550-202ENST00000636877 CECR2Q9BXF3 1484 aa19.8■□□□□ 0.76
LINC02550-202ENST00000636877 CC2D2AQ9P2K1 1620 aa19.75■□□□□ 0.75
LINC02550-202ENST00000636877 SMARCA4P51532 1647 aa19.74■□□□□ 0.75
LINC02550-202ENST00000636877 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
LINC02550-202ENST00000636877 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
LINC02550-202ENST00000636877 MROH2BQ7Z745 1585 aa19.65■□□□□ 0.74
LINC02550-202ENST00000636877 WIZO95785 1651 aa19.53■□□□□ 0.72
LINC02550-202ENST00000636877 SMARCA2P51531 1590 aa19.47■□□□□ 0.71
LINC02550-202ENST00000636877 ATAD2BQ9ULI0 1458 aa19.47■□□□□ 0.71
LINC02550-202ENST00000636877 PEG3Q9GZU2 1588 aa19.46■□□□□ 0.71
LINC02550-202ENST00000636877 RSF1Q96T23 1441 aaPredicted RBP19.44■□□□□ 0.7
LINC02550-202ENST00000636877 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
LINC02550-202ENST00000636877 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
LINC02550-202ENST00000636877 NCAPD3P42695 1498 aa19.35■□□□□ 0.69
LINC02550-202ENST00000636877 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
LINC02550-202ENST00000636877 SUPT5HO00267 1087 aaKnown RBP19.2■□□□□ 0.66
LINC02550-202ENST00000636877 CCDC88BA6NC98 1476 aa18.99■□□□□ 0.63
LINC02550-202ENST00000636877 NESP48681 1621 aa18.96■□□□□ 0.63
LINC02550-202ENST00000636877 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
LINC02550-202ENST00000636877 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.62
LINC02550-202ENST00000636877 KIF21AQ7Z4S6 1674 aa18.85■□□□□ 0.61
LINC02550-202ENST00000636877 CADPSQ9ULU8 1353 aa18.81■□□□□ 0.6
LINC02550-202ENST00000636877 CFTRP13569 1480 aa18.78■□□□□ 0.6
LINC02550-202ENST00000636877 ERCC6Q03468 1493 aa18.73■□□□□ 0.59
LINC02550-202ENST00000636877 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
LINC02550-202ENST00000636877 FANCD2Q9BXW9 1451 aa18.67■□□□□ 0.58
LINC02550-202ENST00000636877 THOC2Q8NI27 1593 aaKnown RBP18.64■□□□□ 0.58
LINC02550-202ENST00000636877 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.57
LINC02550-202ENST00000636877 MRC2Q9UBG0 1479 aa18.53■□□□□ 0.56
LINC02550-202ENST00000636877 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
LINC02550-202ENST00000636877 ABCC8Q09428 1581 aa18.5■□□□□ 0.55
LINC02550-202ENST00000636877 WDR62O43379 1518 aa18.49■□□□□ 0.55
LINC02550-202ENST00000636877 DNMBPQ6XZF7 1577 aa18.45■□□□□ 0.54
LINC02550-202ENST00000636877 TOPBP1Q92547 1522 aa18.43■□□□□ 0.54
LINC02550-202ENST00000636877 CUX1P39880 1505 aa18.42■□□□□ 0.54
LINC02550-202ENST00000636877 SYNJ1O43426 1573 aa18.4■□□□□ 0.54
LINC02550-202ENST00000636877 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
LINC02550-202ENST00000636877 CUX2O14529 1486 aa18.37■□□□□ 0.53
LINC02550-202ENST00000636877 WRNQ14191 1432 aaPredicted RBP eCLIP18.34■□□□□ 0.53
LINC02550-202ENST00000636877 TOP2BQ02880 1626 aa18.33■□□□□ 0.52
LINC02550-202ENST00000636877 FGD5Q6ZNL6 1462 aa18.3■□□□□ 0.52
LINC02550-202ENST00000636877 POLA1P09884 1462 aaPredicted RBP18.28■□□□□ 0.52
LINC02550-202ENST00000636877 WDR97A6NE52 1622 aa18.24■□□□□ 0.51
LINC02550-202ENST00000636877 TARBP1Q13395 1621 aaKnown RBP18.24■□□□□ 0.51
LINC02550-202ENST00000636877 RAD54L2Q9Y4B4 1467 aa18.22■□□□□ 0.51
LINC02550-202ENST00000636877 PHF23Q9BUL5 403 aaPredicted RBP18.21■□□□□ 0.51
LINC02550-202ENST00000636877 IFT140Q96RY7 1462 aa18.18■□□□□ 0.5
LINC02550-202ENST00000636877 EIF4G3O43432 1585 aaKnown RBP18.17■□□□□ 0.5
LINC02550-202ENST00000636877 ZNF608Q9ULD9 1512 aaPredicted RBP18.16■□□□□ 0.5
LINC02550-202ENST00000636877 SOGA1O94964 1423 aa18.15■□□□□ 0.5
LINC02550-202ENST00000636877 PBRM1Q86U86 1689 aa18.12■□□□□ 0.49
LINC02550-202ENST00000636877 ABCA10Q8WWZ4 1543 aa18.08■□□□□ 0.49
LINC02550-202ENST00000636877 ABCA5Q8WWZ7 1642 aa18.08■□□□□ 0.48
LINC02550-202ENST00000636877 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
LINC02550-202ENST00000636877 AQRO60306 1485 aaKnown RBP eCLIP18.05■□□□□ 0.48
LINC02550-202ENST00000636877 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
LINC02550-202ENST00000636877 GAPVD1Q14C86 1478 aa17.98■□□□□ 0.47
LINC02550-202ENST00000636877 CHD1O14646 1710 aa17.96■□□□□ 0.47
LINC02550-202ENST00000636877 RUSC2Q8N2Y8 1516 aa17.94■□□□□ 0.46
LINC02550-202ENST00000636877 SNAPC4Q5SXM2 1469 aa17.94■□□□□ 0.46
LINC02550-202ENST00000636877 GRIN2BQ13224 1484 aa17.92■□□□□ 0.46
LINC02550-202ENST00000636877 ADAMTS12P58397 1594 aa17.9■□□□□ 0.46
LINC02550-202ENST00000636877 KIF27Q86VH2 1401 aa17.89■□□□□ 0.46
LINC02550-202ENST00000636877 ERICH3Q5RHP9 1530 aa17.88■□□□□ 0.45
LINC02550-202ENST00000636877 CUL7Q14999 1698 aa17.85■□□□□ 0.45
LINC02550-202ENST00000636877 MAGI1Q96QZ7 1491 aaPredicted RBP17.84■□□□□ 0.45
LINC02550-202ENST00000636877 SYNJ2O15056 1496 aa17.78■□□□□ 0.44
LINC02550-202ENST00000636877 FAM9AQ8IZU1 332 aaPredicted RBP17.78■□□□□ 0.44
LINC02550-202ENST00000636877 IGF1RP08069 1367 aa17.77■□□□□ 0.43
LINC02550-202ENST00000636877 FBLN2P98095 1184 aa17.76■□□□□ 0.43
LINC02550-202ENST00000636877 FHAD1B1AJZ9 1412 aa17.74■□□□□ 0.43
LINC02550-202ENST00000636877 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
LINC02550-202ENST00000636877 GRIN2AQ12879 1464 aa17.73■□□□□ 0.43
LINC02550-202ENST00000636877 EEA1Q15075 1411 aa17.71■□□□□ 0.43
LINC02550-202ENST00000636877 CHMP7Q8WUX9 453 aaPredicted RBP17.7■□□□□ 0.42
LINC02550-202ENST00000636877 CEP170Q5SW79 1584 aa17.7■□□□□ 0.42
LINC02550-202ENST00000636877 CARMIL1Q5VZK9 1371 aa17.69■□□□□ 0.42
LINC02550-202ENST00000636877 CTTNBP2Q8WZ74 1663 aa17.66■□□□□ 0.42
LINC02550-202ENST00000636877 RAPGEF2Q9Y4G8 1499 aa17.64■□□□□ 0.41
LINC02550-202ENST00000636877 CSRNP3Q8WYN3 585 aa17.64■□□□□ 0.41
LINC02550-202ENST00000636877 KIF21BO75037 1637 aa17.64■□□□□ 0.41
LINC02550-202ENST00000636877 PRXQ9BXM0 1461 aa17.63■□□□□ 0.41
LINC02550-202ENST00000636877 CLASP1Q7Z460 1538 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms