RNA–Protein interactions for RNA: ENST00000636860.1

CLCN2-217, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 407 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-217ENST00000636860 NISCHQ9Y2I1 1504 aa36.08■■■■□ 3.37
CLCN2-217ENST00000636860 ABCC9O60706 1549 aa33.38■■■□□ 2.93
CLCN2-217ENST00000636860 CCDC180Q9P1Z9 1646 aa32.65■■■□□ 2.82
CLCN2-217ENST00000636860 DNAJC5BQ9UF47 199 aa31.72■■■□□ 2.67
CLCN2-217ENST00000636860 RB1CC1Q8TDY2 1594 aa31.49■■■□□ 2.63
CLCN2-217ENST00000636860 NACADO15069 1562 aa31.09■■■□□ 2.57
CLCN2-217ENST00000636860 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
CLCN2-217ENST00000636860 PABPN1Q86U42 306 aaKnown RBP eCLIP30.99■■■□□ 2.55
CLCN2-217ENST00000636860 UNC13AQ9UPW8 1703 aa30.52■■■□□ 2.48
CLCN2-217ENST00000636860 BICRAQ9NZM4 1560 aa30.4■■■□□ 2.46
CLCN2-217ENST00000636860 MYO15BQ96JP2 1530 aa30.39■■■□□ 2.46
CLCN2-217ENST00000636860 CECR2Q9BXF3 1484 aa30.15■■■□□ 2.42
CLCN2-217ENST00000636860 SHROOM4Q9ULL8 1493 aa30.12■■■□□ 2.41
CLCN2-217ENST00000636860 CC2D2AQ9P2K1 1620 aa30.05■■■□□ 2.4
CLCN2-217ENST00000636860 EIF4G1Q04637 1599 aaKnown RBP29.84■■■□□ 2.37
CLCN2-217ENST00000636860 SCRIBQ14160 1630 aa29.78■■■□□ 2.36
CLCN2-217ENST00000636860 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
CLCN2-217ENST00000636860 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
CLCN2-217ENST00000636860 DNAJC5Q9H3Z4 198 aa29.72■■■□□ 2.35
CLCN2-217ENST00000636860 CUX2O14529 1486 aa29.06■■■□□ 2.24
CLCN2-217ENST00000636860 ERCC6Q03468 1493 aa29■■■□□ 2.23
CLCN2-217ENST00000636860 NCAPD3P42695 1498 aa28.67■■■□□ 2.18
CLCN2-217ENST00000636860 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
CLCN2-217ENST00000636860 SMARCA2P51531 1590 aa28.45■■■□□ 2.15
CLCN2-217ENST00000636860 HMGXB3Q12766 1538 aa28.42■■■□□ 2.14
CLCN2-217ENST00000636860 NESP48681 1621 aa28.4■■■□□ 2.14
CLCN2-217ENST00000636860 TRIM41Q8WV44 630 aa28.32■■■□□ 2.12
CLCN2-217ENST00000636860 BAZ1BQ9UIG0 1483 aaKnown RBP28.29■■■□□ 2.12
CLCN2-217ENST00000636860 SMARCA4P51532 1647 aa28.29■■■□□ 2.12
CLCN2-217ENST00000636860 THOC2Q8NI27 1593 aaKnown RBP28.23■■■□□ 2.11
CLCN2-217ENST00000636860 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
CLCN2-217ENST00000636860 BAZ1AQ9NRL2 1556 aaPredicted RBP28.13■■■□□ 2.09
CLCN2-217ENST00000636860 PDS5BQ9NTI5 1447 aa28.12■■■□□ 2.09
CLCN2-217ENST00000636860 KIF21AQ7Z4S6 1674 aa27.97■■■□□ 2.07
CLCN2-217ENST00000636860 PEG3Q9GZU2 1588 aa27.97■■■□□ 2.07
CLCN2-217ENST00000636860 MRC2Q9UBG0 1479 aa27.87■■■□□ 2.05
CLCN2-217ENST00000636860 CADPSQ9ULU8 1353 aa27.83■■■□□ 2.05
CLCN2-217ENST00000636860 MROH2BQ7Z745 1585 aa27.77■■■□□ 2.04
CLCN2-217ENST00000636860 WDR62O43379 1518 aa27.76■■■□□ 2.03
CLCN2-217ENST00000636860 OSCARQ8IYS5 282 aa27.68■■■□□ 2.02
CLCN2-217ENST00000636860 CEP164Q9UPV0 1460 aa27.65■■■□□ 2.02
CLCN2-217ENST00000636860 FANCD2Q9BXW9 1451 aa27.53■■■□□ 2
CLCN2-217ENST00000636860 WIZO95785 1651 aa27.4■■□□□ 1.98
CLCN2-217ENST00000636860 CFTRP13569 1480 aa27.32■■□□□ 1.96
CLCN2-217ENST00000636860 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.95
CLCN2-217ENST00000636860 RIMBP3CA6NJZ7 1639 aa27.25■■□□□ 1.95
CLCN2-217ENST00000636860 RIMBP3BA6NNM3 1639 aa27.25■■□□□ 1.95
CLCN2-217ENST00000636860 RIMBP3Q9UFD9 1639 aa27.25■■□□□ 1.95
CLCN2-217ENST00000636860 ARHGEF11O15085 1522 aa27.15■■□□□ 1.94
CLCN2-217ENST00000636860 IFT140Q96RY7 1462 aa27.12■■□□□ 1.93
CLCN2-217ENST00000636860 TRHP20396 242 aaPredicted RBP27.1■■□□□ 1.93
CLCN2-217ENST00000636860 TOP2AP11388 1531 aaKnown RBP27.08■■□□□ 1.93
CLCN2-217ENST00000636860 CYB5RLQ6IPT4 315 aa27.07■■□□□ 1.92
CLCN2-217ENST00000636860 ZNF608Q9ULD9 1512 aaPredicted RBP27.04■■□□□ 1.92
CLCN2-217ENST00000636860 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
CLCN2-217ENST00000636860 PRDM2Q13029 1718 aa26.9■■□□□ 1.9
CLCN2-217ENST00000636860 FBLN2P98095 1184 aa26.9■■□□□ 1.9
CLCN2-217ENST00000636860 TOPBP1Q92547 1522 aa26.89■■□□□ 1.89
CLCN2-217ENST00000636860 EIF4G3O43432 1585 aaKnown RBP26.88■■□□□ 1.89
CLCN2-217ENST00000636860 ABCC8Q09428 1581 aa26.87■■□□□ 1.89
CLCN2-217ENST00000636860 AEBP2Q6ZN18 517 aaPredicted RBP26.86■■□□□ 1.89
CLCN2-217ENST00000636860 ARAP1Q96P48 1450 aa26.81■■□□□ 1.88
CLCN2-217ENST00000636860 CCDC88BA6NC98 1476 aa26.75■■□□□ 1.87
CLCN2-217ENST00000636860 AQRO60306 1485 aaKnown RBP eCLIP26.75■■□□□ 1.87
CLCN2-217ENST00000636860 DNMBPQ6XZF7 1577 aa26.75■■□□□ 1.87
CLCN2-217ENST00000636860 CHD1O14646 1710 aa26.74■■□□□ 1.87
CLCN2-217ENST00000636860 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
CLCN2-217ENST00000636860 POLA1P09884 1462 aaPredicted RBP26.57■■□□□ 1.84
CLCN2-217ENST00000636860 CHMP7Q8WUX9 453 aaPredicted RBP26.56■■□□□ 1.84
CLCN2-217ENST00000636860 TDRD9Q8NDG6 1382 aaKnown RBP26.52■■□□□ 1.84
CLCN2-217ENST00000636860 SNAPC4Q5SXM2 1469 aa26.5■■□□□ 1.83
CLCN2-217ENST00000636860 SOGA1O94964 1423 aa26.5■■□□□ 1.83
CLCN2-217ENST00000636860 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
CLCN2-217ENST00000636860 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
CLCN2-217ENST00000636860 CLASP1Q7Z460 1538 aa26.44■■□□□ 1.82
CLCN2-217ENST00000636860 MAGI1Q96QZ7 1491 aaPredicted RBP26.41■■□□□ 1.82
CLCN2-217ENST00000636860 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
CLCN2-217ENST00000636860 GRIN2BQ13224 1484 aa26.35■■□□□ 1.81
CLCN2-217ENST00000636860 FGD5Q6ZNL6 1462 aa26.34■■□□□ 1.81
CLCN2-217ENST00000636860 SYNJ2O15056 1496 aa26.33■■□□□ 1.81
CLCN2-217ENST00000636860 GAPVD1Q14C86 1478 aa26.31■■□□□ 1.8
CLCN2-217ENST00000636860 CUX1P39880 1505 aa26.14■■□□□ 1.78
CLCN2-217ENST00000636860 PBRM1Q86U86 1689 aa26.09■■□□□ 1.77
CLCN2-217ENST00000636860 ABCA10Q8WWZ4 1543 aa25.98■■□□□ 1.75
CLCN2-217ENST00000636860 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
CLCN2-217ENST00000636860 ABCA5Q8WWZ7 1642 aa25.95■■□□□ 1.74
CLCN2-217ENST00000636860 ERCC6L2Q5T890 1561 aa25.94■■□□□ 1.74
CLCN2-217ENST00000636860 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
CLCN2-217ENST00000636860 NUP160Q12769 1436 aa25.88■■□□□ 1.73
CLCN2-217ENST00000636860 ADAMTS12P58397 1594 aa25.85■■□□□ 1.73
CLCN2-217ENST00000636860 WRNQ14191 1432 aaPredicted RBP eCLIP25.84■■□□□ 1.73
CLCN2-217ENST00000636860 FHAD1B1AJZ9 1412 aa25.82■■□□□ 1.72
CLCN2-217ENST00000636860 NPM1P06748 294 aaKnown RBP eCLIP25.82■■□□□ 1.72
CLCN2-217ENST00000636860 FAM69CQ0P6D2 419 aa25.79■■□□□ 1.72
CLCN2-217ENST00000636860 SHROOM2Q13796 1616 aa25.77■■□□□ 1.72
CLCN2-217ENST00000636860 PRG4Q92954 1404 aaPredicted RBP25.76■■□□□ 1.71
CLCN2-217ENST00000636860 KIF13AQ9H1H9 1805 aa25.72■■□□□ 1.71
CLCN2-217ENST00000636860 ABCC10Q5T3U5 1492 aa25.68■■□□□ 1.7
CLCN2-217ENST00000636860 JPH4Q96JJ6 628 aa25.68■■□□□ 1.7
CLCN2-217ENST00000636860 ERICH3Q5RHP9 1530 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms