RNA–Protein interactions for RNA: ENST00000636850.1

CHRNA7-220, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 916 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-220ENST00000636850 NISCHQ9Y2I1 1504 aa50.52■■■■■ 5.68
CHRNA7-220ENST00000636850 CCDC180Q9P1Z9 1646 aa45.15■■■■■ 4.82
CHRNA7-220ENST00000636850 ABCC9O60706 1549 aa44.26■■■■■ 4.68
CHRNA7-220ENST00000636850 RB1CC1Q8TDY2 1594 aa42.53■■■■■ 4.4
CHRNA7-220ENST00000636850 NACADO15069 1562 aa42.4■■■■■ 4.38
CHRNA7-220ENST00000636850 DCAF8L2P0C7V8 631 aa42.18■■■■■ 4.34
CHRNA7-220ENST00000636850 ZCCHC6Q5VYS8 1495 aaKnown RBP42.06■■■■■ 4.32
CHRNA7-220ENST00000636850 MYO15BQ96JP2 1530 aa42.05■■■■■ 4.32
CHRNA7-220ENST00000636850 DCAF1Q9Y4B6 1507 aa41.79■■■■■ 4.28
CHRNA7-220ENST00000636850 UNC13AQ9UPW8 1703 aa41.7■■■■■ 4.27
CHRNA7-220ENST00000636850 BICRAQ9NZM4 1560 aa41.25■■■■■ 4.19
CHRNA7-220ENST00000636850 PABPN1Q86U42 306 aaKnown RBP eCLIP41.24■■■■■ 4.19
CHRNA7-220ENST00000636850 SCRIBQ14160 1630 aa41.15■■■■■ 4.18
CHRNA7-220ENST00000636850 SHROOM4Q9ULL8 1493 aa40.79■■■■■ 4.12
CHRNA7-220ENST00000636850 DNAJC5BQ9UF47 199 aa40.71■■■■■ 4.11
CHRNA7-220ENST00000636850 EIF4G1Q04637 1599 aaKnown RBP40.18■■■■■ 4.02
CHRNA7-220ENST00000636850 CC2D2AQ9P2K1 1620 aa40.09■■■■■ 4.01
CHRNA7-220ENST00000636850 CECR2Q9BXF3 1484 aa39.79■■■■□ 3.96
CHRNA7-220ENST00000636850 SMARCA4P51532 1647 aa39.32■■■■□ 3.88
CHRNA7-220ENST00000636850 BAZ1AQ9NRL2 1556 aaPredicted RBP39.21■■■■□ 3.87
CHRNA7-220ENST00000636850 SMARCA2P51531 1590 aa39.08■■■■□ 3.85
CHRNA7-220ENST00000636850 ATAD2BQ9ULI0 1458 aa39.07■■■■□ 3.85
CHRNA7-220ENST00000636850 NCAPD3P42695 1498 aa39.06■■■■□ 3.84
CHRNA7-220ENST00000636850 HMGXB3Q12766 1538 aa38.94■■■■□ 3.82
CHRNA7-220ENST00000636850 MROH2BQ7Z745 1585 aa38.94■■■■□ 3.82
CHRNA7-220ENST00000636850 PEG3Q9GZU2 1588 aa38.91■■■■□ 3.82
CHRNA7-220ENST00000636850 BAZ1BQ9UIG0 1483 aaKnown RBP38.78■■■■□ 3.8
CHRNA7-220ENST00000636850 WIZO95785 1651 aa38.56■■■■□ 3.76
CHRNA7-220ENST00000636850 RSF1Q96T23 1441 aaPredicted RBP38.37■■■■□ 3.73
CHRNA7-220ENST00000636850 NESP48681 1621 aa38.24■■■■□ 3.71
CHRNA7-220ENST00000636850 ERCC6Q03468 1493 aa38.19■■■■□ 3.7
CHRNA7-220ENST00000636850 LAMC3Q9Y6N6 1575 aa38.16■■■■□ 3.7
CHRNA7-220ENST00000636850 TOP2AP11388 1531 aaKnown RBP38.12■■■■□ 3.69
CHRNA7-220ENST00000636850 KIF21AQ7Z4S6 1674 aa37.91■■■■□ 3.66
CHRNA7-220ENST00000636850 CADPSQ9ULU8 1353 aa37.9■■■■□ 3.66
CHRNA7-220ENST00000636850 CUX2O14529 1486 aa37.86■■■■□ 3.65
CHRNA7-220ENST00000636850 PDS5BQ9NTI5 1447 aa37.83■■■■□ 3.65
CHRNA7-220ENST00000636850 THOC2Q8NI27 1593 aaKnown RBP37.8■■■■□ 3.64
CHRNA7-220ENST00000636850 CFTRP13569 1480 aa37.65■■■■□ 3.62
CHRNA7-220ENST00000636850 CCDC88BA6NC98 1476 aa37.6■■■■□ 3.61
CHRNA7-220ENST00000636850 PRDM2Q13029 1718 aa37.58■■■■□ 3.61
CHRNA7-220ENST00000636850 FANCD2Q9BXW9 1451 aa37.52■■■■□ 3.6
CHRNA7-220ENST00000636850 CEP164Q9UPV0 1460 aa37.52■■■■□ 3.6
CHRNA7-220ENST00000636850 MRC2Q9UBG0 1479 aa37.52■■■■□ 3.6
CHRNA7-220ENST00000636850 WDR62O43379 1518 aa37.42■■■■□ 3.58
CHRNA7-220ENST00000636850 URB2Q14146 1524 aaKnown RBP37.17■■■■□ 3.54
CHRNA7-220ENST00000636850 SUPT5HO00267 1087 aaKnown RBP37.17■■■■□ 3.54
CHRNA7-220ENST00000636850 TOPBP1Q92547 1522 aa36.91■■■■□ 3.5
CHRNA7-220ENST00000636850 DNMBPQ6XZF7 1577 aa36.89■■■■□ 3.5
CHRNA7-220ENST00000636850 ABCC8Q09428 1581 aa36.87■■■■□ 3.49
CHRNA7-220ENST00000636850 DNAJC5Q9H3Z4 198 aa36.85■■■■□ 3.49
CHRNA7-220ENST00000636850 IFT140Q96RY7 1462 aa36.72■■■■□ 3.47
CHRNA7-220ENST00000636850 POLA1P09884 1462 aaPredicted RBP36.57■■■■□ 3.45
CHRNA7-220ENST00000636850 ZNF608Q9ULD9 1512 aaPredicted RBP36.57■■■■□ 3.44
CHRNA7-220ENST00000636850 TARBP1Q13395 1621 aaKnown RBP36.56■■■■□ 3.44
CHRNA7-220ENST00000636850 CUX1P39880 1505 aa36.56■■■■□ 3.44
CHRNA7-220ENST00000636850 EIF4G3O43432 1585 aaKnown RBP36.52■■■■□ 3.44
CHRNA7-220ENST00000636850 FGD5Q6ZNL6 1462 aa36.47■■■■□ 3.43
CHRNA7-220ENST00000636850 RAD54L2Q9Y4B4 1467 aa36.39■■■■□ 3.42
CHRNA7-220ENST00000636850 SOGA1O94964 1423 aa36.36■■■■□ 3.41
CHRNA7-220ENST00000636850 AQRO60306 1485 aaKnown RBP eCLIP36.31■■■■□ 3.4
CHRNA7-220ENST00000636850 WDR97A6NE52 1622 aa36.29■■■■□ 3.4
CHRNA7-220ENST00000636850 BIVM-ERCC5R4GMW8 1640 aa36.25■■■■□ 3.39
CHRNA7-220ENST00000636850 TOP2BQ02880 1626 aa36.21■■■■□ 3.39
CHRNA7-220ENST00000636850 SYNJ1O43426 1573 aa36.2■■■■□ 3.39
CHRNA7-220ENST00000636850 WRNQ14191 1432 aaPredicted RBP eCLIP36.2■■■■□ 3.39
CHRNA7-220ENST00000636850 TDRD9Q8NDG6 1382 aaKnown RBP36.18■■■■□ 3.38
CHRNA7-220ENST00000636850 CHD1O14646 1710 aa36.15■■■■□ 3.38
CHRNA7-220ENST00000636850 OSCARQ8IYS5 282 aa36.14■■■■□ 3.38
CHRNA7-220ENST00000636850 ABCA10Q8WWZ4 1543 aa36.08■■■■□ 3.37
CHRNA7-220ENST00000636850 PBRM1Q86U86 1689 aa36.07■■■■□ 3.37
CHRNA7-220ENST00000636850 ABCA5Q8WWZ7 1642 aa36.05■■■■□ 3.36
CHRNA7-220ENST00000636850 SNAPC4Q5SXM2 1469 aa36.03■■■■□ 3.36
CHRNA7-220ENST00000636850 GRIN2BQ13224 1484 aa36.01■■■■□ 3.36
CHRNA7-220ENST00000636850 GAPVD1Q14C86 1478 aa35.99■■■■□ 3.35
CHRNA7-220ENST00000636850 MAGI1Q96QZ7 1491 aaPredicted RBP35.97■■■■□ 3.35
CHRNA7-220ENST00000636850 FBLN2P98095 1184 aa35.88■■■■□ 3.33
CHRNA7-220ENST00000636850 SYNJ2O15056 1496 aa35.81■■■■□ 3.32
CHRNA7-220ENST00000636850 RIMBP3CA6NJZ7 1639 aa35.75■■■■□ 3.31
CHRNA7-220ENST00000636850 RIMBP3BA6NNM3 1639 aa35.75■■■■□ 3.31
CHRNA7-220ENST00000636850 RIMBP3Q9UFD9 1639 aa35.75■■■■□ 3.31
CHRNA7-220ENST00000636850 CHMP7Q8WUX9 453 aaPredicted RBP35.74■■■■□ 3.31
CHRNA7-220ENST00000636850 ADAMTS12P58397 1594 aa35.72■■■■□ 3.31
CHRNA7-220ENST00000636850 ARHGEF11O15085 1522 aa35.68■■■■□ 3.3
CHRNA7-220ENST00000636850 ERICH3Q5RHP9 1530 aa35.67■■■■□ 3.3
CHRNA7-220ENST00000636850 CLASP1Q7Z460 1538 aa35.67■■■■□ 3.3
CHRNA7-220ENST00000636850 TRIM41Q8WV44 630 aa35.59■■■■□ 3.29
CHRNA7-220ENST00000636850 GRIN2AQ12879 1464 aa35.57■■■■□ 3.28
CHRNA7-220ENST00000636850 FHAD1B1AJZ9 1412 aa35.55■■■■□ 3.28
CHRNA7-220ENST00000636850 KIF27Q86VH2 1401 aa35.46■■■■□ 3.27
CHRNA7-220ENST00000636850 CEP170Q5SW79 1584 aa35.44■■■■□ 3.26
CHRNA7-220ENST00000636850 NUP160Q12769 1436 aa35.4■■■■□ 3.26
CHRNA7-220ENST00000636850 CUL7Q14999 1698 aa35.38■■■■□ 3.25
CHRNA7-220ENST00000636850 ARAP1Q96P48 1450 aa35.37■■■■□ 3.25
CHRNA7-220ENST00000636850 IGF1RP08069 1367 aa35.27■■■■□ 3.24
CHRNA7-220ENST00000636850 CYB5RLQ6IPT4 315 aa35.25■■■■□ 3.23
CHRNA7-220ENST00000636850 SHROOM2Q13796 1616 aa35.24■■■■□ 3.23
CHRNA7-220ENST00000636850 RUSC2Q8N2Y8 1516 aa35.21■■■■□ 3.23
CHRNA7-220ENST00000636850 ERCC6L2Q5T890 1561 aa35.14■■■■□ 3.22
CHRNA7-220ENST00000636850 CARMIL1Q5VZK9 1371 aa35.09■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms