RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 NISCHQ9Y2I1 1504 aa37.02■■■■□ 3.52
CACNA1A-230ENST00000636768 CCDC180Q9P1Z9 1646 aa33.04■■■□□ 2.88
CACNA1A-230ENST00000636768 ABCC9O60706 1549 aa32.83■■■□□ 2.85
CACNA1A-230ENST00000636768 RB1CC1Q8TDY2 1594 aa31.35■■■□□ 2.61
CACNA1A-230ENST00000636768 DCAF8L2P0C7V8 631 aa31.21■■■□□ 2.59
CACNA1A-230ENST00000636768 NACADO15069 1562 aa31.21■■■□□ 2.59
CACNA1A-230ENST00000636768 MYO15BQ96JP2 1530 aa30.87■■■□□ 2.53
CACNA1A-230ENST00000636768 ZCCHC6Q5VYS8 1495 aaKnown RBP30.76■■■□□ 2.51
CACNA1A-230ENST00000636768 PABPN1Q86U42 306 aaKnown RBP eCLIP30.63■■■□□ 2.49
CACNA1A-230ENST00000636768 DCAF1Q9Y4B6 1507 aa30.58■■■□□ 2.49
CACNA1A-230ENST00000636768 UNC13AQ9UPW8 1703 aa30.51■■■□□ 2.47
CACNA1A-230ENST00000636768 DNAJC5BQ9UF47 199 aa30.48■■■□□ 2.47
CACNA1A-230ENST00000636768 BICRAQ9NZM4 1560 aa30.38■■■□□ 2.45
CACNA1A-230ENST00000636768 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
CACNA1A-230ENST00000636768 SHROOM4Q9ULL8 1493 aa30.07■■■□□ 2.4
CACNA1A-230ENST00000636768 EIF4G1Q04637 1599 aaKnown RBP29.65■■■□□ 2.34
CACNA1A-230ENST00000636768 CC2D2AQ9P2K1 1620 aa29.62■■■□□ 2.33
CACNA1A-230ENST00000636768 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
CACNA1A-230ENST00000636768 NCAPD3P42695 1498 aa28.81■■■□□ 2.2
CACNA1A-230ENST00000636768 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
CACNA1A-230ENST00000636768 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
CACNA1A-230ENST00000636768 BAZ1AQ9NRL2 1556 aaPredicted RBP28.73■■■□□ 2.19
CACNA1A-230ENST00000636768 SMARCA2P51531 1590 aa28.72■■■□□ 2.19
CACNA1A-230ENST00000636768 HMGXB3Q12766 1538 aa28.63■■■□□ 2.17
CACNA1A-230ENST00000636768 BAZ1BQ9UIG0 1483 aaKnown RBP28.54■■■□□ 2.16
CACNA1A-230ENST00000636768 MROH2BQ7Z745 1585 aa28.53■■■□□ 2.16
CACNA1A-230ENST00000636768 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
CACNA1A-230ENST00000636768 ERCC6Q03468 1493 aa28.36■■■□□ 2.13
CACNA1A-230ENST00000636768 NESP48681 1621 aa28.26■■■□□ 2.11
CACNA1A-230ENST00000636768 WIZO95785 1651 aa28.17■■■□□ 2.1
CACNA1A-230ENST00000636768 CUX2O14529 1486 aa28.16■■■□□ 2.1
CACNA1A-230ENST00000636768 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
CACNA1A-230ENST00000636768 RSF1Q96T23 1441 aaPredicted RBP28.07■■■□□ 2.08
CACNA1A-230ENST00000636768 PDS5BQ9NTI5 1447 aa27.99■■■□□ 2.07
CACNA1A-230ENST00000636768 CADPSQ9ULU8 1353 aa27.98■■■□□ 2.07
CACNA1A-230ENST00000636768 THOC2Q8NI27 1593 aaKnown RBP27.89■■■□□ 2.05
CACNA1A-230ENST00000636768 TOP2AP11388 1531 aaKnown RBP27.88■■■□□ 2.05
CACNA1A-230ENST00000636768 KIF21AQ7Z4S6 1674 aa27.85■■■□□ 2.05
CACNA1A-230ENST00000636768 DNAJC5Q9H3Z4 198 aa27.79■■■□□ 2.04
CACNA1A-230ENST00000636768 MRC2Q9UBG0 1479 aa27.71■■■□□ 2.03
CACNA1A-230ENST00000636768 CFTRP13569 1480 aa27.7■■■□□ 2.03
CACNA1A-230ENST00000636768 CEP164Q9UPV0 1460 aa27.67■■■□□ 2.02
CACNA1A-230ENST00000636768 FANCD2Q9BXW9 1451 aa27.66■■■□□ 2.02
CACNA1A-230ENST00000636768 WDR62O43379 1518 aa27.61■■■□□ 2.01
CACNA1A-230ENST00000636768 CCDC88BA6NC98 1476 aa27.56■■■□□ 2
CACNA1A-230ENST00000636768 URB2Q14146 1524 aaKnown RBP27.4■■□□□ 1.98
CACNA1A-230ENST00000636768 PRDM2Q13029 1718 aa27.35■■□□□ 1.97
CACNA1A-230ENST00000636768 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
CACNA1A-230ENST00000636768 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
CACNA1A-230ENST00000636768 SUPT5HO00267 1087 aaKnown RBP27.12■■□□□ 1.93
CACNA1A-230ENST00000636768 IFT140Q96RY7 1462 aa27.11■■□□□ 1.93
CACNA1A-230ENST00000636768 DNMBPQ6XZF7 1577 aa27.08■■□□□ 1.93
CACNA1A-230ENST00000636768 ZNF608Q9ULD9 1512 aaPredicted RBP27.01■■□□□ 1.91
CACNA1A-230ENST00000636768 OSCARQ8IYS5 282 aa26.95■■□□□ 1.9
CACNA1A-230ENST00000636768 POLA1P09884 1462 aaPredicted RBP26.9■■□□□ 1.9
CACNA1A-230ENST00000636768 EIF4G3O43432 1585 aaKnown RBP26.87■■□□□ 1.89
CACNA1A-230ENST00000636768 TARBP1Q13395 1621 aaKnown RBP26.84■■□□□ 1.89
CACNA1A-230ENST00000636768 AQRO60306 1485 aaKnown RBP eCLIP26.82■■□□□ 1.88
CACNA1A-230ENST00000636768 SOGA1O94964 1423 aa26.81■■□□□ 1.88
CACNA1A-230ENST00000636768 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
CACNA1A-230ENST00000636768 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
CACNA1A-230ENST00000636768 CUX1P39880 1505 aa26.79■■□□□ 1.88
CACNA1A-230ENST00000636768 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
CACNA1A-230ENST00000636768 TDRD9Q8NDG6 1382 aaKnown RBP26.72■■□□□ 1.87
CACNA1A-230ENST00000636768 FBLN2P98095 1184 aa26.65■■□□□ 1.86
CACNA1A-230ENST00000636768 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
CACNA1A-230ENST00000636768 SNAPC4Q5SXM2 1469 aa26.57■■□□□ 1.84
CACNA1A-230ENST00000636768 CHD1O14646 1710 aa26.55■■□□□ 1.84
CACNA1A-230ENST00000636768 GRIN2BQ13224 1484 aa26.54■■□□□ 1.84
CACNA1A-230ENST00000636768 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
CACNA1A-230ENST00000636768 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
CACNA1A-230ENST00000636768 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
CACNA1A-230ENST00000636768 MAGI1Q96QZ7 1491 aaPredicted RBP26.5■■□□□ 1.83
CACNA1A-230ENST00000636768 WRNQ14191 1432 aaPredicted RBP eCLIP26.5■■□□□ 1.83
CACNA1A-230ENST00000636768 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
CACNA1A-230ENST00000636768 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
CACNA1A-230ENST00000636768 CHMP7Q8WUX9 453 aaPredicted RBP26.48■■□□□ 1.83
CACNA1A-230ENST00000636768 GAPVD1Q14C86 1478 aa26.48■■□□□ 1.83
CACNA1A-230ENST00000636768 TOP2BQ02880 1626 aa26.43■■□□□ 1.82
CACNA1A-230ENST00000636768 SYNJ2O15056 1496 aa26.42■■□□□ 1.82
CACNA1A-230ENST00000636768 SYNJ1O43426 1573 aa26.41■■□□□ 1.82
CACNA1A-230ENST00000636768 BIVM-ERCC5R4GMW8 1640 aa26.4■■□□□ 1.82
CACNA1A-230ENST00000636768 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.82
CACNA1A-230ENST00000636768 PBRM1Q86U86 1689 aa26.38■■□□□ 1.81
CACNA1A-230ENST00000636768 CYB5RLQ6IPT4 315 aa26.31■■□□□ 1.8
CACNA1A-230ENST00000636768 CLASP1Q7Z460 1538 aa26.3■■□□□ 1.8
CACNA1A-230ENST00000636768 ARAP1Q96P48 1450 aa26.25■■□□□ 1.79
CACNA1A-230ENST00000636768 ADAMTS12P58397 1594 aa26.2■■□□□ 1.78
CACNA1A-230ENST00000636768 GRIN2AQ12879 1464 aa26.18■■□□□ 1.78
CACNA1A-230ENST00000636768 FHAD1B1AJZ9 1412 aa26.16■■□□□ 1.78
CACNA1A-230ENST00000636768 ERICH3Q5RHP9 1530 aa26.16■■□□□ 1.78
CACNA1A-230ENST00000636768 NUP160Q12769 1436 aa26.07■■□□□ 1.76
CACNA1A-230ENST00000636768 CEP170Q5SW79 1584 aa26.05■■□□□ 1.76
CACNA1A-230ENST00000636768 KIF27Q86VH2 1401 aa25.98■■□□□ 1.75
CACNA1A-230ENST00000636768 TRHP20396 242 aaPredicted RBP25.95■■□□□ 1.74
CACNA1A-230ENST00000636768 ERCC6L2Q5T890 1561 aa25.91■■□□□ 1.74
CACNA1A-230ENST00000636768 IGF1RP08069 1367 aa25.91■■□□□ 1.74
CACNA1A-230ENST00000636768 SHROOM2Q13796 1616 aa25.88■■□□□ 1.73
CACNA1A-230ENST00000636768 PRG4Q92954 1404 aaPredicted RBP25.83■■□□□ 1.73
CACNA1A-230ENST00000636768 JPH4Q96JJ6 628 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms