RNA–Protein interactions for RNA: ENST00000636707.1

ACTR1A-207, Transcript of ARP1 actin related protein 1 homolog A, humanhuman

TSL 5

Gene ACTR1A, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1A-207ENST00000636707 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
ACTR1A-207ENST00000636707 ABCC9O60706 1549 aa28.4■■■□□ 2.14
ACTR1A-207ENST00000636707 CCDC180Q9P1Z9 1646 aa28■■■□□ 2.07
ACTR1A-207ENST00000636707 DNAJC5BQ9UF47 199 aa27.07■■□□□ 1.92
ACTR1A-207ENST00000636707 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
ACTR1A-207ENST00000636707 NACADO15069 1562 aa26.55■■□□□ 1.84
ACTR1A-207ENST00000636707 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
ACTR1A-207ENST00000636707 PABPN1Q86U42 306 aaKnown RBP eCLIP26.29■■□□□ 1.8
ACTR1A-207ENST00000636707 DCAF8L2P0C7V8 631 aa26.12■■□□□ 1.77
ACTR1A-207ENST00000636707 BICRAQ9NZM4 1560 aa26.1■■□□□ 1.77
ACTR1A-207ENST00000636707 MYO15BQ96JP2 1530 aa26.02■■□□□ 1.76
ACTR1A-207ENST00000636707 SHROOM4Q9ULL8 1493 aa25.73■■□□□ 1.71
ACTR1A-207ENST00000636707 CC2D2AQ9P2K1 1620 aa25.69■■□□□ 1.7
ACTR1A-207ENST00000636707 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
ACTR1A-207ENST00000636707 EIF4G1Q04637 1599 aaKnown RBP25.49■■□□□ 1.67
ACTR1A-207ENST00000636707 DCAF1Q9Y4B6 1507 aa25.48■■□□□ 1.67
ACTR1A-207ENST00000636707 ZCCHC6Q5VYS8 1495 aaKnown RBP25.46■■□□□ 1.67
ACTR1A-207ENST00000636707 SCRIBQ14160 1630 aa25.4■■□□□ 1.66
ACTR1A-207ENST00000636707 DNAJC5Q9H3Z4 198 aa25.29■■□□□ 1.64
ACTR1A-207ENST00000636707 CUX2O14529 1486 aa24.76■■□□□ 1.55
ACTR1A-207ENST00000636707 ERCC6Q03468 1493 aa24.58■■□□□ 1.52
ACTR1A-207ENST00000636707 NCAPD3P42695 1498 aa24.48■■□□□ 1.51
ACTR1A-207ENST00000636707 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
ACTR1A-207ENST00000636707 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
ACTR1A-207ENST00000636707 SMARCA2P51531 1590 aa24.26■■□□□ 1.47
ACTR1A-207ENST00000636707 NESP48681 1621 aa24.24■■□□□ 1.47
ACTR1A-207ENST00000636707 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
ACTR1A-207ENST00000636707 THOC2Q8NI27 1593 aaKnown RBP24.19■■□□□ 1.46
ACTR1A-207ENST00000636707 LAMC3Q9Y6N6 1575 aa24.07■■□□□ 1.44
ACTR1A-207ENST00000636707 BAZ1BQ9UIG0 1483 aaKnown RBP24.06■■□□□ 1.44
ACTR1A-207ENST00000636707 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
ACTR1A-207ENST00000636707 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
ACTR1A-207ENST00000636707 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
ACTR1A-207ENST00000636707 TRIM41Q8WV44 630 aa23.91■■□□□ 1.42
ACTR1A-207ENST00000636707 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.41
ACTR1A-207ENST00000636707 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
ACTR1A-207ENST00000636707 MRC2Q9UBG0 1479 aa23.72■■□□□ 1.39
ACTR1A-207ENST00000636707 WDR62O43379 1518 aa23.71■■□□□ 1.39
ACTR1A-207ENST00000636707 CADPSQ9ULU8 1353 aa23.68■■□□□ 1.38
ACTR1A-207ENST00000636707 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
ACTR1A-207ENST00000636707 WIZO95785 1651 aa23.46■■□□□ 1.35
ACTR1A-207ENST00000636707 OSCARQ8IYS5 282 aa23.45■■□□□ 1.34
ACTR1A-207ENST00000636707 FANCD2Q9BXW9 1451 aa23.43■■□□□ 1.34
ACTR1A-207ENST00000636707 CFTRP13569 1480 aa23.32■■□□□ 1.32
ACTR1A-207ENST00000636707 RIMBP3CA6NJZ7 1639 aa23.3■■□□□ 1.32
ACTR1A-207ENST00000636707 RIMBP3BA6NNM3 1639 aa23.3■■□□□ 1.32
ACTR1A-207ENST00000636707 RIMBP3Q9UFD9 1639 aa23.3■■□□□ 1.32
ACTR1A-207ENST00000636707 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
ACTR1A-207ENST00000636707 PRDM2Q13029 1718 aa23.19■■□□□ 1.3
ACTR1A-207ENST00000636707 ARHGEF11O15085 1522 aa23.15■■□□□ 1.3
ACTR1A-207ENST00000636707 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
ACTR1A-207ENST00000636707 IFT140Q96RY7 1462 aa23.07■■□□□ 1.28
ACTR1A-207ENST00000636707 ZNF608Q9ULD9 1512 aaPredicted RBP23.07■■□□□ 1.28
ACTR1A-207ENST00000636707 RSF1Q96T23 1441 aaPredicted RBP23.02■■□□□ 1.28
ACTR1A-207ENST00000636707 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
ACTR1A-207ENST00000636707 TOPBP1Q92547 1522 aa22.94■■□□□ 1.26
ACTR1A-207ENST00000636707 CHD1O14646 1710 aa22.94■■□□□ 1.26
ACTR1A-207ENST00000636707 CYB5RLQ6IPT4 315 aa22.92■■□□□ 1.26
ACTR1A-207ENST00000636707 ABCC8Q09428 1581 aa22.88■■□□□ 1.25
ACTR1A-207ENST00000636707 ARAP1Q96P48 1450 aa22.87■■□□□ 1.25
ACTR1A-207ENST00000636707 TRHP20396 242 aaPredicted RBP22.84■■□□□ 1.25
ACTR1A-207ENST00000636707 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
ACTR1A-207ENST00000636707 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
ACTR1A-207ENST00000636707 TARBP1Q13395 1621 aaKnown RBP22.82■■□□□ 1.24
ACTR1A-207ENST00000636707 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.243e-6■■□□□ 13.8
ACTR1A-207ENST00000636707 FBLN2P98095 1184 aa22.68■■□□□ 1.22
ACTR1A-207ENST00000636707 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
ACTR1A-207ENST00000636707 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
ACTR1A-207ENST00000636707 AEBP2Q6ZN18 517 aaPredicted RBP22.59■■□□□ 1.21
ACTR1A-207ENST00000636707 WDR97A6NE52 1622 aa22.59■■□□□ 1.21
ACTR1A-207ENST00000636707 SYNJ1O43426 1573 aa22.56■■□□□ 1.2
ACTR1A-207ENST00000636707 SNAPC4Q5SXM2 1469 aa22.55■■□□□ 1.2
ACTR1A-207ENST00000636707 RAD54L2Q9Y4B4 1467 aa22.55■■□□□ 1.2
ACTR1A-207ENST00000636707 TDRD9Q8NDG6 1382 aaKnown RBP22.52■■□□□ 1.2
ACTR1A-207ENST00000636707 SOGA1O94964 1423 aa22.52■■□□□ 1.2
ACTR1A-207ENST00000636707 MAGI1Q96QZ7 1491 aaPredicted RBP22.5■■□□□ 1.19
ACTR1A-207ENST00000636707 CHMP7Q8WUX9 453 aaPredicted RBP22.45■■□□□ 1.18
ACTR1A-207ENST00000636707 FGD5Q6ZNL6 1462 aa22.44■■□□□ 1.18
ACTR1A-207ENST00000636707 GRIN2BQ13224 1484 aa22.42■■□□□ 1.18
ACTR1A-207ENST00000636707 SYNJ2O15056 1496 aa22.41■■□□□ 1.18
ACTR1A-207ENST00000636707 PBRM1Q86U86 1689 aa22.38■■□□□ 1.17
ACTR1A-207ENST00000636707 GAPVD1Q14C86 1478 aa22.37■■□□□ 1.17
ACTR1A-207ENST00000636707 CUX1P39880 1505 aa22.34■■□□□ 1.17
ACTR1A-207ENST00000636707 ABCA5Q8WWZ7 1642 aa22.23■■□□□ 1.15
ACTR1A-207ENST00000636707 ERCC6L2Q5T890 1561 aa22.2■■□□□ 1.14
ACTR1A-207ENST00000636707 ABCA10Q8WWZ4 1543 aa22.17■■□□□ 1.14
ACTR1A-207ENST00000636707 KIF13AQ9H1H9 1805 aa22.15■■□□□ 1.14
ACTR1A-207ENST00000636707 GRIN2AQ12879 1464 aa22.14■■□□□ 1.13
ACTR1A-207ENST00000636707 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
ACTR1A-207ENST00000636707 SHROOM2Q13796 1616 aa22.1■■□□□ 1.13
ACTR1A-207ENST00000636707 ADAMTS12P58397 1594 aa22.08■■□□□ 1.13
ACTR1A-207ENST00000636707 NUP160Q12769 1436 aa22.08■■□□□ 1.13
ACTR1A-207ENST00000636707 FHAD1B1AJZ9 1412 aa21.96■■□□□ 1.11
ACTR1A-207ENST00000636707 WRNQ14191 1432 aaPredicted RBP eCLIP21.95■■□□□ 1.1
ACTR1A-207ENST00000636707 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
ACTR1A-207ENST00000636707 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
ACTR1A-207ENST00000636707 ABCC10Q5T3U5 1492 aa21.88■■□□□ 1.09
ACTR1A-207ENST00000636707 PRG4Q92954 1404 aaPredicted RBP21.88■■□□□ 1.09
ACTR1A-207ENST00000636707 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
ACTR1A-207ENST00000636707 MAPKBP1O60336 1514 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms