RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 NISCHQ9Y2I1 1504 aa25.1■■□□□ 1.61
CLN5-213ENST00000636681 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
CLN5-213ENST00000636681 ABCC9O60706 1549 aa21.29■■□□□ 1
CLN5-213ENST00000636681 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
CLN5-213ENST00000636681 DCAF8L2P0C7V8 631 aa20.91■□□□□ 0.94
CLN5-213ENST00000636681 DCAF1Q9Y4B6 1507 aa20.67■□□□□ 0.9
CLN5-213ENST00000636681 NACADO15069 1562 aa20.59■□□□□ 0.89
CLN5-213ENST00000636681 MYO15BQ96JP2 1530 aa20.54■□□□□ 0.88
CLN5-213ENST00000636681 RB1CC1Q8TDY2 1594 aa20.54■□□□□ 0.88
CLN5-213ENST00000636681 SCRIBQ14160 1630 aa20.33■□□□□ 0.84
CLN5-213ENST00000636681 SHROOM4Q9ULL8 1493 aa20.32■□□□□ 0.84
CLN5-213ENST00000636681 UNC13AQ9UPW8 1703 aa20.3■□□□□ 0.84
CLN5-213ENST00000636681 BICRAQ9NZM4 1560 aa20.03■□□□□ 0.8
CLN5-213ENST00000636681 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLN5-213ENST00000636681 CECR2Q9BXF3 1484 aa19.61■□□□□ 0.73
CLN5-213ENST00000636681 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
CLN5-213ENST00000636681 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
CLN5-213ENST00000636681 EIF4G1Q04637 1599 aaKnown RBP19.41■□□□□ 0.7
CLN5-213ENST00000636681 BAZ1AQ9NRL2 1556 aaPredicted RBP19.38■□□□□ 0.69
CLN5-213ENST00000636681 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.68
CLN5-213ENST00000636681 WIZO95785 1651 aa19.31■□□□□ 0.68
CLN5-213ENST00000636681 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
CLN5-213ENST00000636681 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
CLN5-213ENST00000636681 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
CLN5-213ENST00000636681 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
CLN5-213ENST00000636681 PEG3Q9GZU2 1588 aa19.13■□□□□ 0.65
CLN5-213ENST00000636681 SMARCA2P51531 1590 aa19.08■□□□□ 0.65
CLN5-213ENST00000636681 NCAPD3P42695 1498 aa19.01■□□□□ 0.63
CLN5-213ENST00000636681 BAZ1BQ9UIG0 1483 aaKnown RBP19.01■□□□□ 0.63
CLN5-213ENST00000636681 TOP2AP11388 1531 aaKnown RBP18.98■□□□□ 0.63
CLN5-213ENST00000636681 HMGXB3Q12766 1538 aa18.96■□□□□ 0.63
CLN5-213ENST00000636681 CCDC88BA6NC98 1476 aa18.82■□□□□ 0.6
CLN5-213ENST00000636681 NESP48681 1621 aa18.61■□□□□ 0.57
CLN5-213ENST00000636681 CADPSQ9ULU8 1353 aa18.5■□□□□ 0.55
CLN5-213ENST00000636681 CFTRP13569 1480 aa18.5■□□□□ 0.55
CLN5-213ENST00000636681 PRDM2Q13029 1718 aa18.47■□□□□ 0.55
CLN5-213ENST00000636681 LAMC3Q9Y6N6 1575 aa18.44■□□□□ 0.54
CLN5-213ENST00000636681 KIF21AQ7Z4S6 1674 aa18.4■□□□□ 0.54
CLN5-213ENST00000636681 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
CLN5-213ENST00000636681 FANCD2Q9BXW9 1451 aa18.34■□□□□ 0.53
CLN5-213ENST00000636681 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.52
CLN5-213ENST00000636681 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
CLN5-213ENST00000636681 CEP164Q9UPV0 1460 aa18.24■□□□□ 0.51
CLN5-213ENST00000636681 ERCC6Q03468 1493 aa18.22■□□□□ 0.51
CLN5-213ENST00000636681 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
CLN5-213ENST00000636681 CUX1P39880 1505 aa18.19■□□□□ 0.5
CLN5-213ENST00000636681 URB2Q14146 1524 aaKnown RBP18.18■□□□□ 0.5
CLN5-213ENST00000636681 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
CLN5-213ENST00000636681 THOC2Q8NI27 1593 aaKnown RBP18.14■□□□□ 0.49
CLN5-213ENST00000636681 BIVM-ERCC5R4GMW8 1640 aa18.11■□□□□ 0.49
CLN5-213ENST00000636681 TOPBP1Q92547 1522 aa18.11■□□□□ 0.49
CLN5-213ENST00000636681 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
CLN5-213ENST00000636681 TOP2BQ02880 1626 aa18.1■□□□□ 0.49
CLN5-213ENST00000636681 DNMBPQ6XZF7 1577 aa18.1■□□□□ 0.49
CLN5-213ENST00000636681 TRIM41Q8WV44 630 aa18.09■□□□□ 0.49
CLN5-213ENST00000636681 WDR62O43379 1518 aa18.05■□□□□ 0.48
CLN5-213ENST00000636681 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
CLN5-213ENST00000636681 POLA1P09884 1462 aaPredicted RBP17.99■□□□□ 0.47
CLN5-213ENST00000636681 RAD54L2Q9Y4B4 1467 aa17.98■□□□□ 0.47
CLN5-213ENST00000636681 CUX2O14529 1486 aa17.95■□□□□ 0.46
CLN5-213ENST00000636681 RUSC2Q8N2Y8 1516 aa17.92■□□□□ 0.46
CLN5-213ENST00000636681 TARBP1Q13395 1621 aaKnown RBP17.91■□□□□ 0.46
CLN5-213ENST00000636681 SOGA1O94964 1423 aa17.9■□□□□ 0.46
CLN5-213ENST00000636681 WDR97A6NE52 1622 aa17.88■□□□□ 0.45
CLN5-213ENST00000636681 FAM9AQ8IZU1 332 aaPredicted RBP17.86■□□□□ 0.45
CLN5-213ENST00000636681 ZNF608Q9ULD9 1512 aaPredicted RBP17.84■□□□□ 0.45
CLN5-213ENST00000636681 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
CLN5-213ENST00000636681 ABCA10Q8WWZ4 1543 aa17.81■□□□□ 0.44
CLN5-213ENST00000636681 IFT140Q96RY7 1462 aa17.8■□□□□ 0.44
CLN5-213ENST00000636681 AQRO60306 1485 aaKnown RBP eCLIP17.78■□□□□ 0.44
CLN5-213ENST00000636681 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
CLN5-213ENST00000636681 EIF4G3O43432 1585 aaKnown RBP17.75■□□□□ 0.43
CLN5-213ENST00000636681 PBRM1Q86U86 1689 aa17.72■□□□□ 0.43
CLN5-213ENST00000636681 KIF27Q86VH2 1401 aa17.71■□□□□ 0.43
CLN5-213ENST00000636681 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
CLN5-213ENST00000636681 GAPVD1Q14C86 1478 aa17.7■□□□□ 0.42
CLN5-213ENST00000636681 IGF1RP08069 1367 aa17.64■□□□□ 0.42
CLN5-213ENST00000636681 CSRNP3Q8WYN3 585 aa17.64■□□□□ 0.41
CLN5-213ENST00000636681 EEA1Q15075 1411 aa17.61■□□□□ 0.41
CLN5-213ENST00000636681 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
CLN5-213ENST00000636681 GRIN2BQ13224 1484 aa17.6■□□□□ 0.41
CLN5-213ENST00000636681 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.41
CLN5-213ENST00000636681 SNAPC4Q5SXM2 1469 aa17.58■□□□□ 0.41
CLN5-213ENST00000636681 ADAMTS12P58397 1594 aa17.55■□□□□ 0.4
CLN5-213ENST00000636681 RAPGEF2Q9Y4G8 1499 aa17.54■□□□□ 0.4
CLN5-213ENST00000636681 CUL7Q14999 1698 aa17.54■□□□□ 0.4
CLN5-213ENST00000636681 PRXQ9BXM0 1461 aa17.53■□□□□ 0.4
CLN5-213ENST00000636681 CARMIL1Q5VZK9 1371 aa17.53■□□□□ 0.4
CLN5-213ENST00000636681 KIF21BO75037 1637 aa17.51■□□□□ 0.39
CLN5-213ENST00000636681 CHD1O14646 1710 aa17.5■□□□□ 0.39
CLN5-213ENST00000636681 MAGI1Q96QZ7 1491 aaPredicted RBP17.48■□□□□ 0.39
CLN5-213ENST00000636681 FBLN2P98095 1184 aa17.47■□□□□ 0.39
CLN5-213ENST00000636681 FHAD1B1AJZ9 1412 aa17.46■□□□□ 0.39
CLN5-213ENST00000636681 SYNJ2O15056 1496 aa17.43■□□□□ 0.38
CLN5-213ENST00000636681 GOLGA3Q08378 1498 aa17.43■□□□□ 0.38
CLN5-213ENST00000636681 GRIN2AQ12879 1464 aa17.41■□□□□ 0.38
CLN5-213ENST00000636681 CHMP7Q8WUX9 453 aaPredicted RBP17.4■□□□□ 0.38
CLN5-213ENST00000636681 UBTFP17480 764 aaKnown RBP17.4■□□□□ 0.38
CLN5-213ENST00000636681 CEP170Q5SW79 1584 aa17.37■□□□□ 0.37
CLN5-213ENST00000636681 CTTNBP2Q8WZ74 1663 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms