RNA–Protein interactions for RNA: ENST00000636658.1

CLCN2-214, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-214ENST00000636658 NISCHQ9Y2I1 1504 aa36.47■■■■□ 3.43
CLCN2-214ENST00000636658 ABCC9O60706 1549 aa33.66■■■□□ 2.98
CLCN2-214ENST00000636658 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
CLCN2-214ENST00000636658 DNAJC5BQ9UF47 199 aa32.23■■■□□ 2.75
CLCN2-214ENST00000636658 RB1CC1Q8TDY2 1594 aa31.81■■■□□ 2.68
CLCN2-214ENST00000636658 NACADO15069 1562 aa31.43■■■□□ 2.62
CLCN2-214ENST00000636658 UNC13AQ9UPW8 1703 aa31.26■■■□□ 2.59
CLCN2-214ENST00000636658 PABPN1Q86U42 306 aaKnown RBP eCLIP31.11■■■□□ 2.57
CLCN2-214ENST00000636658 BICRAQ9NZM4 1560 aa31■■■□□ 2.55
CLCN2-214ENST00000636658 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
CLCN2-214ENST00000636658 DCAF8L2P0C7V8 631 aa30.74■■■□□ 2.51
CLCN2-214ENST00000636658 SHROOM4Q9ULL8 1493 aa30.5■■■□□ 2.47
CLCN2-214ENST00000636658 CC2D2AQ9P2K1 1620 aa30.47■■■□□ 2.47
CLCN2-214ENST00000636658 CECR2Q9BXF3 1484 aa30.42■■■□□ 2.46
CLCN2-214ENST00000636658 EIF4G1Q04637 1599 aaKnown RBP30.24■■■□□ 2.43
CLCN2-214ENST00000636658 DCAF1Q9Y4B6 1507 aa30.16■■■□□ 2.42
CLCN2-214ENST00000636658 DNAJC5Q9H3Z4 198 aa30.11■■■□□ 2.41
CLCN2-214ENST00000636658 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
CLCN2-214ENST00000636658 SCRIBQ14160 1630 aa30.03■■■□□ 2.4
CLCN2-214ENST00000636658 CUX2O14529 1486 aa29.4■■■□□ 2.3
CLCN2-214ENST00000636658 ERCC6Q03468 1493 aa29.07■■■□□ 2.24
CLCN2-214ENST00000636658 NCAPD3P42695 1498 aa29.01■■■□□ 2.23
CLCN2-214ENST00000636658 ATAD2BQ9ULI0 1458 aa28.79■■■□□ 2.2
CLCN2-214ENST00000636658 HMGXB3Q12766 1538 aa28.79■■■□□ 2.2
CLCN2-214ENST00000636658 NESP48681 1621 aa28.75■■■□□ 2.19
CLCN2-214ENST00000636658 THOC2Q8NI27 1593 aaKnown RBP28.74■■■□□ 2.19
CLCN2-214ENST00000636658 SMARCA2P51531 1590 aa28.69■■■□□ 2.18
CLCN2-214ENST00000636658 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
CLCN2-214ENST00000636658 LAMC3Q9Y6N6 1575 aa28.5■■■□□ 2.15
CLCN2-214ENST00000636658 KIF21AQ7Z4S6 1674 aa28.47■■■□□ 2.15
CLCN2-214ENST00000636658 BAZ1BQ9UIG0 1483 aaKnown RBP28.44■■■□□ 2.14
CLCN2-214ENST00000636658 PEG3Q9GZU2 1588 aa28.44■■■□□ 2.14
CLCN2-214ENST00000636658 BAZ1AQ9NRL2 1556 aaPredicted RBP28.34■■■□□ 2.13
CLCN2-214ENST00000636658 TRIM41Q8WV44 630 aa28.34■■■□□ 2.13
CLCN2-214ENST00000636658 PDS5BQ9NTI5 1447 aa28.25■■■□□ 2.11
CLCN2-214ENST00000636658 WDR62O43379 1518 aa28.13■■■□□ 2.09
CLCN2-214ENST00000636658 MRC2Q9UBG0 1479 aa28.1■■■□□ 2.09
CLCN2-214ENST00000636658 MROH2BQ7Z745 1585 aa28.08■■■□□ 2.09
CLCN2-214ENST00000636658 CADPSQ9ULU8 1353 aa28.02■■■□□ 2.08
CLCN2-214ENST00000636658 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.04
CLCN2-214ENST00000636658 OSCARQ8IYS5 282 aa27.76■■■□□ 2.03
CLCN2-214ENST00000636658 WIZO95785 1651 aa27.73■■■□□ 2.03
CLCN2-214ENST00000636658 FANCD2Q9BXW9 1451 aa27.72■■■□□ 2.03
CLCN2-214ENST00000636658 RIMBP3CA6NJZ7 1639 aa27.67■■■□□ 2.02
CLCN2-214ENST00000636658 RIMBP3BA6NNM3 1639 aa27.67■■■□□ 2.02
CLCN2-214ENST00000636658 RIMBP3Q9UFD9 1639 aa27.67■■■□□ 2.02
CLCN2-214ENST00000636658 CFTRP13569 1480 aa27.61■■■□□ 2.01
CLCN2-214ENST00000636658 URB2Q14146 1524 aaKnown RBP27.59■■■□□ 2.01
CLCN2-214ENST00000636658 ARHGEF11O15085 1522 aa27.47■■□□□ 1.99
CLCN2-214ENST00000636658 PRDM2Q13029 1718 aa27.44■■□□□ 1.98
CLCN2-214ENST00000636658 ZNF608Q9ULD9 1512 aaPredicted RBP27.34■■□□□ 1.97
CLCN2-214ENST00000636658 TOP2AP11388 1531 aaKnown RBP27.33■■□□□ 1.97
CLCN2-214ENST00000636658 IFT140Q96RY7 1462 aa27.3■■□□□ 1.96
CLCN2-214ENST00000636658 EIF4G3O43432 1585 aaKnown RBP27.22■■□□□ 1.95
CLCN2-214ENST00000636658 RSF1Q96T23 1441 aaPredicted RBP27.19■■□□□ 1.94
CLCN2-214ENST00000636658 CHD1O14646 1710 aa27.19■■□□□ 1.94
CLCN2-214ENST00000636658 ARAP1Q96P48 1450 aa27.16■■□□□ 1.94
CLCN2-214ENST00000636658 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
CLCN2-214ENST00000636658 CYB5RLQ6IPT4 315 aa27.13■■□□□ 1.93
CLCN2-214ENST00000636658 TARBP1Q13395 1621 aaKnown RBP27.05■■□□□ 1.92
CLCN2-214ENST00000636658 ABCC8Q09428 1581 aa27.01■■□□□ 1.92
CLCN2-214ENST00000636658 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.92
CLCN2-214ENST00000636658 TRHP20396 242 aaPredicted RBP27■■□□□ 1.91
CLCN2-214ENST00000636658 CCDC88BA6NC98 1476 aa26.97■■□□□ 1.91
CLCN2-214ENST00000636658 AQRO60306 1485 aaKnown RBP eCLIP26.94■■□□□ 1.92e-8■■■■□ 19.7
CLCN2-214ENST00000636658 CLASP1Q7Z460 1538 aa26.85■■□□□ 1.89
CLCN2-214ENST00000636658 POLA1P09884 1462 aaPredicted RBP26.82■■□□□ 1.88
CLCN2-214ENST00000636658 WDR97A6NE52 1622 aa26.74■■□□□ 1.87
CLCN2-214ENST00000636658 FBLN2P98095 1184 aa26.73■■□□□ 1.87
CLCN2-214ENST00000636658 AEBP2Q6ZN18 517 aaPredicted RBP26.73■■□□□ 1.87
CLCN2-214ENST00000636658 RAD54L2Q9Y4B4 1467 aa26.69■■□□□ 1.86
CLCN2-214ENST00000636658 SYNJ1O43426 1573 aa26.69■■□□□ 1.86
CLCN2-214ENST00000636658 SNAPC4Q5SXM2 1469 aa26.68■■□□□ 1.86
CLCN2-214ENST00000636658 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
CLCN2-214ENST00000636658 TDRD9Q8NDG6 1382 aaKnown RBP26.62■■□□□ 1.85
CLCN2-214ENST00000636658 SOGA1O94964 1423 aa26.61■■□□□ 1.85
CLCN2-214ENST00000636658 SYNJ2O15056 1496 aa26.53■■□□□ 1.84
CLCN2-214ENST00000636658 FGD5Q6ZNL6 1462 aa26.53■■□□□ 1.84
CLCN2-214ENST00000636658 GRIN2BQ13224 1484 aa26.5■■□□□ 1.83
CLCN2-214ENST00000636658 GAPVD1Q14C86 1478 aa26.5■■□□□ 1.83
CLCN2-214ENST00000636658 PBRM1Q86U86 1689 aa26.48■■□□□ 1.83
CLCN2-214ENST00000636658 CHMP7Q8WUX9 453 aaPredicted RBP26.48■■□□□ 1.83
CLCN2-214ENST00000636658 CUX1P39880 1505 aa26.44■■□□□ 1.82
CLCN2-214ENST00000636658 ERCC6L2Q5T890 1561 aa26.34■■□□□ 1.81
CLCN2-214ENST00000636658 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
CLCN2-214ENST00000636658 KIF13AQ9H1H9 1805 aa26.3■■□□□ 1.8
CLCN2-214ENST00000636658 ABCA10Q8WWZ4 1543 aa26.23■■□□□ 1.79
CLCN2-214ENST00000636658 SHROOM2Q13796 1616 aa26.22■■□□□ 1.79
CLCN2-214ENST00000636658 CEP170Q5SW79 1584 aa26.22■■□□□ 1.79
CLCN2-214ENST00000636658 GRIN2AQ12879 1464 aa26.19■■□□□ 1.78
CLCN2-214ENST00000636658 NUP160Q12769 1436 aa26.16■■□□□ 1.78
CLCN2-214ENST00000636658 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
CLCN2-214ENST00000636658 FHAD1B1AJZ9 1412 aa25.95■■□□□ 1.74
CLCN2-214ENST00000636658 ABCC10Q5T3U5 1492 aa25.94■■□□□ 1.74
CLCN2-214ENST00000636658 DIP2BQ9P265 1576 aa25.91■■□□□ 1.74
CLCN2-214ENST00000636658 MAPKBP1O60336 1514 aa25.9■■□□□ 1.74
CLCN2-214ENST00000636658 BIVM-ERCC5R4GMW8 1640 aa25.9■■□□□ 1.74
CLCN2-214ENST00000636658 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.74
CLCN2-214ENST00000636658 WRNQ14191 1432 aaPredicted RBP eCLIP25.88■■□□□ 1.73
CLCN2-214ENST00000636658 PRG4Q92954 1404 aaPredicted RBP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms