RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 NISCHQ9Y2I1 1504 aa4.18□□□□□ -1.74
SYNGAP1-216ENST00000636640 CCDC180Q9P1Z9 1646 aa3.8□□□□□ -1.8
SYNGAP1-216ENST00000636640 ABCC9O60706 1549 aa3.77□□□□□ -1.81
SYNGAP1-216ENST00000636640 UNC13AQ9UPW8 1703 aa3.69□□□□□ -1.82
SYNGAP1-216ENST00000636640 RB1CC1Q8TDY2 1594 aa3.57□□□□□ -1.84
SYNGAP1-216ENST00000636640 DNAJC5BQ9UF47 199 aa3.57□□□□□ -1.84
SYNGAP1-216ENST00000636640 BICRAQ9NZM4 1560 aa3.54□□□□□ -1.84
SYNGAP1-216ENST00000636640 NACADO15069 1562 aa3.53□□□□□ -1.84
SYNGAP1-216ENST00000636640 DCAF8L2P0C7V8 631 aa3.5□□□□□ -1.85
SYNGAP1-216ENST00000636640 PABPN1Q86U42 306 aaKnown RBP eCLIP3.49□□□□□ -1.85
SYNGAP1-216ENST00000636640 SCRIBQ14160 1630 aa3.48□□□□□ -1.85
SYNGAP1-216ENST00000636640 ZCCHC6Q5VYS8 1495 aaKnown RBP3.46□□□□□ -1.86
SYNGAP1-216ENST00000636640 CC2D2AQ9P2K1 1620 aa3.44□□□□□ -1.86
SYNGAP1-216ENST00000636640 MYO15BQ96JP2 1530 aa3.44□□□□□ -1.86
SYNGAP1-216ENST00000636640 DCAF1Q9Y4B6 1507 aa3.41□□□□□ -1.86
SYNGAP1-216ENST00000636640 EIF4G1Q04637 1599 aaKnown RBP3.4□□□□□ -1.87
SYNGAP1-216ENST00000636640 CECR2Q9BXF3 1484 aa3.36□□□□□ -1.87
SYNGAP1-216ENST00000636640 SHROOM4Q9ULL8 1493 aa3.34□□□□□ -1.88
SYNGAP1-216ENST00000636640 KIF21AQ7Z4S6 1674 aa3.3□□□□□ -1.88
SYNGAP1-216ENST00000636640 SMARCA4P51532 1647 aa3.3□□□□□ -1.88
SYNGAP1-216ENST00000636640 WIZO95785 1651 aa3.27□□□□□ -1.89
SYNGAP1-216ENST00000636640 NESP48681 1621 aa3.27□□□□□ -1.89
SYNGAP1-216ENST00000636640 MROH2BQ7Z745 1585 aa3.26□□□□□ -1.89
SYNGAP1-216ENST00000636640 THOC2Q8NI27 1593 aaKnown RBP3.25□□□□□ -1.89
SYNGAP1-216ENST00000636640 ATAD2BQ9ULI0 1458 aa3.25□□□□□ -1.89
SYNGAP1-216ENST00000636640 PRDM2Q13029 1718 aa3.24□□□□□ -1.89
SYNGAP1-216ENST00000636640 HMGXB3Q12766 1538 aa3.24□□□□□ -1.89
SYNGAP1-216ENST00000636640 NCAPD3P42695 1498 aa3.23□□□□□ -1.89
SYNGAP1-216ENST00000636640 SMARCA2P51531 1590 aa3.23□□□□□ -1.89
SYNGAP1-216ENST00000636640 PEG3Q9GZU2 1588 aa3.23□□□□□ -1.89
SYNGAP1-216ENST00000636640 BAZ1AQ9NRL2 1556 aaPredicted RBP3.22□□□□□ -1.89
SYNGAP1-216ENST00000636640 BAZ1BQ9UIG0 1483 aaKnown RBP3.21□□□□□ -1.9
SYNGAP1-216ENST00000636640 DNAJC5Q9H3Z4 198 aa3.2□□□□□ -1.9
SYNGAP1-216ENST00000636640 ERCC6Q03468 1493 aa3.2□□□□□ -1.9
SYNGAP1-216ENST00000636640 LAMC3Q9Y6N6 1575 aa3.2□□□□□ -1.9
SYNGAP1-216ENST00000636640 CUX2O14529 1486 aa3.19□□□□□ -1.9
SYNGAP1-216ENST00000636640 CHD1O14646 1710 aa3.16□□□□□ -1.9
SYNGAP1-216ENST00000636640 WDR62O43379 1518 aa3.14□□□□□ -1.91
SYNGAP1-216ENST00000636640 TOP2AP11388 1531 aaKnown RBP3.14□□□□□ -1.91
SYNGAP1-216ENST00000636640 RSF1Q96T23 1441 aaPredicted RBP3.14□□□□□ -1.91
SYNGAP1-216ENST00000636640 URB2Q14146 1524 aaKnown RBP3.14□□□□□ -1.91
SYNGAP1-216ENST00000636640 MRC2Q9UBG0 1479 aa3.13□□□□□ -1.91
SYNGAP1-216ENST00000636640 CADPSQ9ULU8 1353 aa3.12□□□□□ -1.91
SYNGAP1-216ENST00000636640 CCDC88BA6NC98 1476 aa3.12□□□□□ -1.91
SYNGAP1-216ENST00000636640 FANCD2Q9BXW9 1451 aa3.12□□□□□ -1.91
SYNGAP1-216ENST00000636640 CEP164Q9UPV0 1460 aa3.12□□□□□ -1.91
SYNGAP1-216ENST00000636640 PDS5BQ9NTI5 1447 aa3.11□□□□□ -1.91
SYNGAP1-216ENST00000636640 WDR97A6NE52 1622 aa3.11□□□□□ -1.91
SYNGAP1-216ENST00000636640 RIMBP3CA6NJZ7 1639 aa3.11□□□□□ -1.91
SYNGAP1-216ENST00000636640 RIMBP3BA6NNM3 1639 aa3.11□□□□□ -1.91
SYNGAP1-216ENST00000636640 TARBP1Q13395 1621 aaKnown RBP3.11□□□□□ -1.91
SYNGAP1-216ENST00000636640 RIMBP3Q9UFD9 1639 aa3.11□□□□□ -1.91
SYNGAP1-216ENST00000636640 CFTRP13569 1480 aa3.1□□□□□ -1.91
SYNGAP1-216ENST00000636640 ZNF608Q9ULD9 1512 aaPredicted RBP3.1□□□□□ -1.91
SYNGAP1-216ENST00000636640 EIF4G3O43432 1585 aaKnown RBP3.1□□□□□ -1.91
SYNGAP1-216ENST00000636640 PBRM1Q86U86 1689 aa3.1□□□□□ -1.91
SYNGAP1-216ENST00000636640 TOPBP1Q92547 1522 aa3.09□□□□□ -1.92
SYNGAP1-216ENST00000636640 TRIM41Q8WV44 630 aa3.08□□□□□ -1.92
SYNGAP1-216ENST00000636640 DNMBPQ6XZF7 1577 aa3.08□□□□□ -1.92
SYNGAP1-216ENST00000636640 RAD54L2Q9Y4B4 1467 aa3.06□□□□□ -1.92
SYNGAP1-216ENST00000636640 CUX1P39880 1505 aa3.05□□□□□ -1.92
SYNGAP1-216ENST00000636640 AQRO60306 1485 aaKnown RBP eCLIP3.05□□□□□ -1.92
SYNGAP1-216ENST00000636640 KIF13AQ9H1H9 1805 aa3.05□□□□□ -1.92
SYNGAP1-216ENST00000636640 ARHGEF11O15085 1522 aa3.04□□□□□ -1.92
SYNGAP1-216ENST00000636640 POLA1P09884 1462 aaPredicted RBP3.04□□□□□ -1.92
SYNGAP1-216ENST00000636640 BIVM-ERCC5R4GMW8 1640 aa3.04□□□□□ -1.92
SYNGAP1-216ENST00000636640 ABCC8Q09428 1581 aa3.04□□□□□ -1.92
SYNGAP1-216ENST00000636640 FGD5Q6ZNL6 1462 aa3.03□□□□□ -1.92
SYNGAP1-216ENST00000636640 IFT140Q96RY7 1462 aa3.03□□□□□ -1.92
SYNGAP1-216ENST00000636640 ABCA5Q8WWZ7 1642 aa3.03□□□□□ -1.92
SYNGAP1-216ENST00000636640 SYNJ1O43426 1573 aa3.03□□□□□ -1.92
SYNGAP1-216ENST00000636640 ERCC6L2Q5T890 1561 aa3.03□□□□□ -1.92
SYNGAP1-216ENST00000636640 CLASP1Q7Z460 1538 aa3.03□□□□□ -1.92
SYNGAP1-216ENST00000636640 OSCARQ8IYS5 282 aa3.02□□□□□ -1.93
SYNGAP1-216ENST00000636640 ARAP1Q96P48 1450 aa3.02□□□□□ -1.93
SYNGAP1-216ENST00000636640 TDRD9Q8NDG6 1382 aaKnown RBP3.01□□□□□ -1.93
SYNGAP1-216ENST00000636640 TSPOAP1O95153 1857 aa3.01□□□□□ -1.93
SYNGAP1-216ENST00000636640 SNAPC4Q5SXM2 1469 aa3.01□□□□□ -1.93
SYNGAP1-216ENST00000636640 CEP170Q5SW79 1584 aa3□□□□□ -1.93
SYNGAP1-216ENST00000636640 SUPT5HO00267 1087 aaKnown RBP3□□□□□ -1.93
SYNGAP1-216ENST00000636640 SOGA1O94964 1423 aa3□□□□□ -1.93
SYNGAP1-216ENST00000636640 TOP2BQ02880 1626 aa3□□□□□ -1.93
SYNGAP1-216ENST00000636640 ADAMTS12P58397 1594 aa3□□□□□ -1.93
SYNGAP1-216ENST00000636640 FBLN2P98095 1184 aa2.99□□□□□ -1.93
SYNGAP1-216ENST00000636640 SHROOM2Q13796 1616 aa2.99□□□□□ -1.93
SYNGAP1-216ENST00000636640 CYB5RLQ6IPT4 315 aa2.98□□□□□ -1.93
SYNGAP1-216ENST00000636640 ABCA10Q8WWZ4 1543 aa2.98□□□□□ -1.93
SYNGAP1-216ENST00000636640 GAPVD1Q14C86 1478 aa2.97□□□□□ -1.93
SYNGAP1-216ENST00000636640 SYNJ2O15056 1496 aa2.96□□□□□ -1.93
SYNGAP1-216ENST00000636640 GRIN2BQ13224 1484 aa2.96□□□□□ -1.93
SYNGAP1-216ENST00000636640 MAGI1Q96QZ7 1491 aaPredicted RBP2.96□□□□□ -1.93
SYNGAP1-216ENST00000636640 CUL7Q14999 1698 aa2.96□□□□□ -1.94
SYNGAP1-216ENST00000636640 GRIN2AQ12879 1464 aa2.96□□□□□ -1.94
SYNGAP1-216ENST00000636640 PPRC1Q5VV67 1664 aaKnown RBP2.95□□□□□ -1.94
SYNGAP1-216ENST00000636640 RUSC2Q8N2Y8 1516 aa2.95□□□□□ -1.94
SYNGAP1-216ENST00000636640 ADCY10Q96PN6 1610 aa2.95□□□□□ -1.94
SYNGAP1-216ENST00000636640 CTTNBP2Q8WZ74 1663 aa2.95□□□□□ -1.94
SYNGAP1-216ENST00000636640 WRNQ14191 1432 aaPredicted RBP eCLIP2.94□□□□□ -1.94
SYNGAP1-216ENST00000636640 NUP160Q12769 1436 aa2.93□□□□□ -1.94
SYNGAP1-216ENST00000636640 ERICH3Q5RHP9 1530 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms