RNA–Protein interactions for RNA: ENST00000636521.1

CHRNA7-216, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 524 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-216ENST00000636521 NISCHQ9Y2I1 1504 aa24.18■■□□□ 1.46
CHRNA7-216ENST00000636521 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
CHRNA7-216ENST00000636521 ABCC9O60706 1549 aa21.45■■□□□ 1.02
CHRNA7-216ENST00000636521 DCAF8L2P0C7V8 631 aa20.57■□□□□ 0.88
CHRNA7-216ENST00000636521 RB1CC1Q8TDY2 1594 aa20.55■□□□□ 0.88
CHRNA7-216ENST00000636521 NACADO15069 1562 aa20.46■□□□□ 0.87
CHRNA7-216ENST00000636521 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
CHRNA7-216ENST00000636521 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
CHRNA7-216ENST00000636521 ZCCHC6Q5VYS8 1495 aaKnown RBP20.02■□□□□ 0.8
CHRNA7-216ENST00000636521 DCAF1Q9Y4B6 1507 aa20.01■□□□□ 0.79
CHRNA7-216ENST00000636521 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
CHRNA7-216ENST00000636521 UNC13AQ9UPW8 1703 aa19.92■□□□□ 0.78
CHRNA7-216ENST00000636521 BICRAQ9NZM4 1560 aa19.79■□□□□ 0.76
CHRNA7-216ENST00000636521 SHROOM4Q9ULL8 1493 aa19.7■□□□□ 0.74
CHRNA7-216ENST00000636521 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
CHRNA7-216ENST00000636521 CC2D2AQ9P2K1 1620 aa19.37■□□□□ 0.69
CHRNA7-216ENST00000636521 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
CHRNA7-216ENST00000636521 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
CHRNA7-216ENST00000636521 NCAPD3P42695 1498 aa18.89■□□□□ 0.61
CHRNA7-216ENST00000636521 SMARCA2P51531 1590 aa18.82■□□□□ 0.6
CHRNA7-216ENST00000636521 ATAD2BQ9ULI0 1458 aa18.81■□□□□ 0.6
CHRNA7-216ENST00000636521 BAZ1AQ9NRL2 1556 aaPredicted RBP18.8■□□□□ 0.6
CHRNA7-216ENST00000636521 SMARCA4P51532 1647 aa18.78■□□□□ 0.6
CHRNA7-216ENST00000636521 HMGXB3Q12766 1538 aa18.7■□□□□ 0.58
CHRNA7-216ENST00000636521 BAZ1BQ9UIG0 1483 aaKnown RBP18.67■□□□□ 0.58
CHRNA7-216ENST00000636521 PEG3Q9GZU2 1588 aa18.61■□□□□ 0.57
CHRNA7-216ENST00000636521 ERCC6Q03468 1493 aa18.6■□□□□ 0.57
CHRNA7-216ENST00000636521 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
CHRNA7-216ENST00000636521 CUX2O14529 1486 aa18.48■□□□□ 0.55
CHRNA7-216ENST00000636521 NESP48681 1621 aa18.42■□□□□ 0.54
CHRNA7-216ENST00000636521 LAMC3Q9Y6N6 1575 aa18.42■□□□□ 0.54
CHRNA7-216ENST00000636521 PDS5BQ9NTI5 1447 aa18.4■□□□□ 0.54
CHRNA7-216ENST00000636521 WIZO95785 1651 aa18.36■□□□□ 0.53
CHRNA7-216ENST00000636521 CADPSQ9ULU8 1353 aa18.35■□□□□ 0.53
CHRNA7-216ENST00000636521 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
CHRNA7-216ENST00000636521 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
CHRNA7-216ENST00000636521 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
CHRNA7-216ENST00000636521 KIF21AQ7Z4S6 1674 aa18.17■□□□□ 0.5
CHRNA7-216ENST00000636521 THOC2Q8NI27 1593 aaKnown RBP18.16■□□□□ 0.5
CHRNA7-216ENST00000636521 MRC2Q9UBG0 1479 aa18.13■□□□□ 0.49
CHRNA7-216ENST00000636521 CFTRP13569 1480 aa18.12■□□□□ 0.49
CHRNA7-216ENST00000636521 CEP164Q9UPV0 1460 aa18.11■□□□□ 0.49
CHRNA7-216ENST00000636521 FANCD2Q9BXW9 1451 aa18.09■□□□□ 0.49
CHRNA7-216ENST00000636521 WDR62O43379 1518 aa18.02■□□□□ 0.47
CHRNA7-216ENST00000636521 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
CHRNA7-216ENST00000636521 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
CHRNA7-216ENST00000636521 ABCC8Q09428 1581 aa17.87■□□□□ 0.45
CHRNA7-216ENST00000636521 URB2Q14146 1524 aaKnown RBP17.85■□□□□ 0.45
CHRNA7-216ENST00000636521 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
CHRNA7-216ENST00000636521 SUPT5HO00267 1087 aaKnown RBP17.77■□□□□ 0.44
CHRNA7-216ENST00000636521 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
CHRNA7-216ENST00000636521 TOPBP1Q92547 1522 aa17.73■□□□□ 0.43
CHRNA7-216ENST00000636521 DNMBPQ6XZF7 1577 aa17.69■□□□□ 0.42
CHRNA7-216ENST00000636521 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
CHRNA7-216ENST00000636521 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
CHRNA7-216ENST00000636521 SOGA1O94964 1423 aa17.59■□□□□ 0.41
CHRNA7-216ENST00000636521 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
CHRNA7-216ENST00000636521 FBLN2P98095 1184 aa17.55■□□□□ 0.4
CHRNA7-216ENST00000636521 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.4
CHRNA7-216ENST00000636521 TARBP1Q13395 1621 aaKnown RBP17.52■□□□□ 0.4
CHRNA7-216ENST00000636521 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
CHRNA7-216ENST00000636521 TDRD9Q8NDG6 1382 aaKnown RBP17.49■□□□□ 0.39
CHRNA7-216ENST00000636521 RAD54L2Q9Y4B4 1467 aa17.48■□□□□ 0.39
CHRNA7-216ENST00000636521 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
CHRNA7-216ENST00000636521 CHMP7Q8WUX9 453 aaPredicted RBP17.46■□□□□ 0.39
CHRNA7-216ENST00000636521 WDR97A6NE52 1622 aa17.45■□□□□ 0.38
CHRNA7-216ENST00000636521 CUX1P39880 1505 aa17.45■□□□□ 0.38
CHRNA7-216ENST00000636521 GRIN2BQ13224 1484 aa17.39■□□□□ 0.37
CHRNA7-216ENST00000636521 WRNQ14191 1432 aaPredicted RBP eCLIP17.37■□□□□ 0.37
CHRNA7-216ENST00000636521 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
CHRNA7-216ENST00000636521 GAPVD1Q14C86 1478 aa17.35■□□□□ 0.37
CHRNA7-216ENST00000636521 CHD1O14646 1710 aa17.34■□□□□ 0.37
CHRNA7-216ENST00000636521 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
CHRNA7-216ENST00000636521 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.37
CHRNA7-216ENST00000636521 RIMBP3CA6NJZ7 1639 aa17.32■□□□□ 0.36
CHRNA7-216ENST00000636521 RIMBP3BA6NNM3 1639 aa17.32■□□□□ 0.36
CHRNA7-216ENST00000636521 RIMBP3Q9UFD9 1639 aa17.32■□□□□ 0.36
CHRNA7-216ENST00000636521 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
CHRNA7-216ENST00000636521 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
CHRNA7-216ENST00000636521 SYNJ2O15056 1496 aa17.29■□□□□ 0.36
CHRNA7-216ENST00000636521 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
CHRNA7-216ENST00000636521 TOP2BQ02880 1626 aa17.25■□□□□ 0.35
CHRNA7-216ENST00000636521 BIVM-ERCC5R4GMW8 1640 aa17.22■□□□□ 0.35
CHRNA7-216ENST00000636521 PBRM1Q86U86 1689 aa17.21■□□□□ 0.35
CHRNA7-216ENST00000636521 ABCA5Q8WWZ7 1642 aa17.19■□□□□ 0.34
CHRNA7-216ENST00000636521 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
CHRNA7-216ENST00000636521 FHAD1B1AJZ9 1412 aa17.14■□□□□ 0.33
CHRNA7-216ENST00000636521 CLASP1Q7Z460 1538 aa17.14■□□□□ 0.33
CHRNA7-216ENST00000636521 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
CHRNA7-216ENST00000636521 ARAP1Q96P48 1450 aa17.12■□□□□ 0.33
CHRNA7-216ENST00000636521 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
CHRNA7-216ENST00000636521 ADAMTS12P58397 1594 aa17.04■□□□□ 0.32
CHRNA7-216ENST00000636521 NUP160Q12769 1436 aa17.04■□□□□ 0.32
CHRNA7-216ENST00000636521 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
CHRNA7-216ENST00000636521 JPH4Q96JJ6 628 aa17.03■□□□□ 0.32
CHRNA7-216ENST00000636521 IGF1RP08069 1367 aa16.98■□□□□ 0.31
CHRNA7-216ENST00000636521 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
CHRNA7-216ENST00000636521 NPM1P06748 294 aaKnown RBP eCLIP16.93■□□□□ 0.3
CHRNA7-216ENST00000636521 PRG4Q92954 1404 aaPredicted RBP16.92■□□□□ 0.3
CHRNA7-216ENST00000636521 CARMIL1Q5VZK9 1371 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms