RNA–Protein interactions for RNA: ENST00000636499.1

KCNQ2-225, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5

Gene KCNQ2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-225ENST00000636499 NISCHQ9Y2I1 1504 aa27.68■■■□□ 2.02
KCNQ2-225ENST00000636499 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
KCNQ2-225ENST00000636499 ABCC9O60706 1549 aa23.88■■□□□ 1.41
KCNQ2-225ENST00000636499 ZCCHC6Q5VYS8 1495 aaKnown RBP23.12■■□□□ 1.29
KCNQ2-225ENST00000636499 NACADO15069 1562 aa23.04■■□□□ 1.28
KCNQ2-225ENST00000636499 RB1CC1Q8TDY2 1594 aa23.03■■□□□ 1.28
KCNQ2-225ENST00000636499 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
KCNQ2-225ENST00000636499 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
KCNQ2-225ENST00000636499 DCAF8L2P0C7V8 631 aa22.89■■□□□ 1.25
KCNQ2-225ENST00000636499 UNC13AQ9UPW8 1703 aa22.63■■□□□ 1.21
KCNQ2-225ENST00000636499 SCRIBQ14160 1630 aa22.44■■□□□ 1.18
KCNQ2-225ENST00000636499 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
KCNQ2-225ENST00000636499 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
KCNQ2-225ENST00000636499 SHROOM4Q9ULL8 1493 aa22.12■■□□□ 1.13
KCNQ2-225ENST00000636499 DNAJC5BQ9UF47 199 aa21.8■■□□□ 1.08
KCNQ2-225ENST00000636499 EIF4G1Q04637 1599 aaKnown RBP21.76■■□□□ 1.07
KCNQ2-225ENST00000636499 CC2D2AQ9P2K1 1620 aa21.65■■□□□ 1.06
KCNQ2-225ENST00000636499 CECR2Q9BXF3 1484 aa21.57■■□□□ 1.04
KCNQ2-225ENST00000636499 SMARCA4P51532 1647 aa21.49■■□□□ 1.03
KCNQ2-225ENST00000636499 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
KCNQ2-225ENST00000636499 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
KCNQ2-225ENST00000636499 ATAD2BQ9ULI0 1458 aa21.29■■□□□ 1
KCNQ2-225ENST00000636499 PEG3Q9GZU2 1588 aa21.28■■□□□ 1
KCNQ2-225ENST00000636499 SMARCA2P51531 1590 aa21.27■□□□□ 0.99
KCNQ2-225ENST00000636499 NCAPD3P42695 1498 aa21.25■□□□□ 0.99
KCNQ2-225ENST00000636499 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
KCNQ2-225ENST00000636499 WIZO95785 1651 aa21.15■□□□□ 0.98
KCNQ2-225ENST00000636499 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
KCNQ2-225ENST00000636499 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
KCNQ2-225ENST00000636499 TOP2AP11388 1531 aaKnown RBP20.92■□□□□ 0.94
KCNQ2-225ENST00000636499 NESP48681 1621 aa20.74■□□□□ 0.91
KCNQ2-225ENST00000636499 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
KCNQ2-225ENST00000636499 CCDC88BA6NC98 1476 aa20.64■□□□□ 0.89
KCNQ2-225ENST00000636499 CADPSQ9ULU8 1353 aa20.6■□□□□ 0.89
KCNQ2-225ENST00000636499 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
KCNQ2-225ENST00000636499 CFTRP13569 1480 aa20.56■□□□□ 0.88
KCNQ2-225ENST00000636499 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
KCNQ2-225ENST00000636499 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
KCNQ2-225ENST00000636499 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
KCNQ2-225ENST00000636499 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
KCNQ2-225ENST00000636499 THOC2Q8NI27 1593 aaKnown RBP20.45■□□□□ 0.86
KCNQ2-225ENST00000636499 FANCD2Q9BXW9 1451 aa20.39■□□□□ 0.85
KCNQ2-225ENST00000636499 CEP164Q9UPV0 1460 aa20.36■□□□□ 0.85
KCNQ2-225ENST00000636499 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
KCNQ2-225ENST00000636499 CUX2O14529 1486 aa20.3■□□□□ 0.84
KCNQ2-225ENST00000636499 WDR62O43379 1518 aa20.28■□□□□ 0.84
KCNQ2-225ENST00000636499 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
KCNQ2-225ENST00000636499 TOPBP1Q92547 1522 aa20.12■□□□□ 0.81
KCNQ2-225ENST00000636499 DNMBPQ6XZF7 1577 aa20.11■□□□□ 0.81
KCNQ2-225ENST00000636499 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
KCNQ2-225ENST00000636499 CUX1P39880 1505 aa20.04■□□□□ 0.8
KCNQ2-225ENST00000636499 POLA1P09884 1462 aaPredicted RBP19.95■□□□□ 0.78
KCNQ2-225ENST00000636499 TARBP1Q13395 1621 aaKnown RBP19.93■□□□□ 0.78
KCNQ2-225ENST00000636499 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
KCNQ2-225ENST00000636499 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
KCNQ2-225ENST00000636499 FGD5Q6ZNL6 1462 aa19.92■□□□□ 0.78
KCNQ2-225ENST00000636499 IFT140Q96RY7 1462 aa19.91■□□□□ 0.78
KCNQ2-225ENST00000636499 TOP2BQ02880 1626 aa19.89■□□□□ 0.77
KCNQ2-225ENST00000636499 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
KCNQ2-225ENST00000636499 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
KCNQ2-225ENST00000636499 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
KCNQ2-225ENST00000636499 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
KCNQ2-225ENST00000636499 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.76
KCNQ2-225ENST00000636499 SOGA1O94964 1423 aa19.8■□□□□ 0.76
KCNQ2-225ENST00000636499 ABCA10Q8WWZ4 1543 aa19.73■□□□□ 0.75
KCNQ2-225ENST00000636499 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.75
KCNQ2-225ENST00000636499 ABCA5Q8WWZ7 1642 aa19.7■□□□□ 0.74
KCNQ2-225ENST00000636499 TDRD9Q8NDG6 1382 aaKnown RBP19.69■□□□□ 0.74
KCNQ2-225ENST00000636499 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
KCNQ2-225ENST00000636499 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
KCNQ2-225ENST00000636499 GRIN2BQ13224 1484 aa19.58■□□□□ 0.72
KCNQ2-225ENST00000636499 SNAPC4Q5SXM2 1469 aa19.56■□□□□ 0.72
KCNQ2-225ENST00000636499 CHD1O14646 1710 aa19.56■□□□□ 0.72
KCNQ2-225ENST00000636499 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
KCNQ2-225ENST00000636499 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
KCNQ2-225ENST00000636499 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
KCNQ2-225ENST00000636499 DNAJC5Q9H3Z4 198 aa19.46■□□□□ 0.71
KCNQ2-225ENST00000636499 SYNJ2O15056 1496 aa19.45■□□□□ 0.7
KCNQ2-225ENST00000636499 KIF27Q86VH2 1401 aa19.43■□□□□ 0.7
KCNQ2-225ENST00000636499 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
KCNQ2-225ENST00000636499 OSCARQ8IYS5 282 aa19.38■□□□□ 0.69
KCNQ2-225ENST00000636499 RUSC2Q8N2Y8 1516 aa19.38■□□□□ 0.69
KCNQ2-225ENST00000636499 FHAD1B1AJZ9 1412 aa19.37■□□□□ 0.69
KCNQ2-225ENST00000636499 GRIN2AQ12879 1464 aa19.36■□□□□ 0.69
KCNQ2-225ENST00000636499 CUL7Q14999 1698 aa19.36■□□□□ 0.69
KCNQ2-225ENST00000636499 IGF1RP08069 1367 aa19.35■□□□□ 0.69
KCNQ2-225ENST00000636499 FBLN2P98095 1184 aa19.35■□□□□ 0.69
KCNQ2-225ENST00000636499 CLASP1Q7Z460 1538 aa19.34■□□□□ 0.69
KCNQ2-225ENST00000636499 CHIC1Q5VXU3 224 aa19.32■□□□□ 0.68
KCNQ2-225ENST00000636499 CHMP7Q8WUX9 453 aaPredicted RBP19.32■□□□□ 0.68
KCNQ2-225ENST00000636499 CEP170Q5SW79 1584 aa19.3■□□□□ 0.68
KCNQ2-225ENST00000636499 NUP160Q12769 1436 aa19.28■□□□□ 0.68
KCNQ2-225ENST00000636499 CARMIL1Q5VZK9 1371 aa19.22■□□□□ 0.67
KCNQ2-225ENST00000636499 RIMBP3CA6NJZ7 1639 aa19.21■□□□□ 0.67
KCNQ2-225ENST00000636499 RIMBP3BA6NNM3 1639 aa19.21■□□□□ 0.67
KCNQ2-225ENST00000636499 RIMBP3Q9UFD9 1639 aa19.21■□□□□ 0.67
KCNQ2-225ENST00000636499 ARHGEF11O15085 1522 aa19.19■□□□□ 0.66
KCNQ2-225ENST00000636499 SHROOM2Q13796 1616 aa19.18■□□□□ 0.66
KCNQ2-225ENST00000636499 PRXQ9BXM0 1461 aa19.16■□□□□ 0.66
KCNQ2-225ENST00000636499 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms