RNA–Protein interactions for RNA: ENST00000636440.1

CHRNA7-215, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 875 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-215ENST00000636440 NISCHQ9Y2I1 1504 aa41.73■■■■■ 4.27
CHRNA7-215ENST00000636440 CCDC180Q9P1Z9 1646 aa37.28■■■■□ 3.56
CHRNA7-215ENST00000636440 ABCC9O60706 1549 aa36.68■■■■□ 3.46
CHRNA7-215ENST00000636440 RB1CC1Q8TDY2 1594 aa35.24■■■■□ 3.23
CHRNA7-215ENST00000636440 NACADO15069 1562 aa35.15■■■■□ 3.22
CHRNA7-215ENST00000636440 MYO15BQ96JP2 1530 aa34.9■■■■□ 3.18
CHRNA7-215ENST00000636440 DCAF8L2P0C7V8 631 aa34.83■■■■□ 3.17
CHRNA7-215ENST00000636440 ZCCHC6Q5VYS8 1495 aaKnown RBP34.7■■■■□ 3.15
CHRNA7-215ENST00000636440 DCAF1Q9Y4B6 1507 aa34.6■■■■□ 3.13
CHRNA7-215ENST00000636440 UNC13AQ9UPW8 1703 aa34.35■■■■□ 3.09
CHRNA7-215ENST00000636440 PABPN1Q86U42 306 aaKnown RBP eCLIP34.19■■■■□ 3.06
CHRNA7-215ENST00000636440 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
CHRNA7-215ENST00000636440 DNAJC5BQ9UF47 199 aa33.97■■■■□ 3.03
CHRNA7-215ENST00000636440 SHROOM4Q9ULL8 1493 aa33.92■■■■□ 3.02
CHRNA7-215ENST00000636440 SCRIBQ14160 1630 aa33.87■■■■□ 3.01
CHRNA7-215ENST00000636440 EIF4G1Q04637 1599 aaKnown RBP33.29■■■□□ 2.92
CHRNA7-215ENST00000636440 CC2D2AQ9P2K1 1620 aa33.21■■■□□ 2.91
CHRNA7-215ENST00000636440 CECR2Q9BXF3 1484 aa33.05■■■□□ 2.88
CHRNA7-215ENST00000636440 NCAPD3P42695 1498 aa32.43■■■□□ 2.78
CHRNA7-215ENST00000636440 SMARCA4P51532 1647 aa32.43■■■□□ 2.78
CHRNA7-215ENST00000636440 BAZ1AQ9NRL2 1556 aaPredicted RBP32.38■■■□□ 2.77
CHRNA7-215ENST00000636440 ATAD2BQ9ULI0 1458 aa32.35■■■□□ 2.77
CHRNA7-215ENST00000636440 SMARCA2P51531 1590 aa32.33■■■□□ 2.77
CHRNA7-215ENST00000636440 HMGXB3Q12766 1538 aa32.25■■■□□ 2.75
CHRNA7-215ENST00000636440 PEG3Q9GZU2 1588 aa32.19■■■□□ 2.74
CHRNA7-215ENST00000636440 MROH2BQ7Z745 1585 aa32.1■■■□□ 2.73
CHRNA7-215ENST00000636440 BAZ1BQ9UIG0 1483 aaKnown RBP32.06■■■□□ 2.72
CHRNA7-215ENST00000636440 WIZO95785 1651 aa31.71■■■□□ 2.67
CHRNA7-215ENST00000636440 ERCC6Q03468 1493 aa31.68■■■□□ 2.66
CHRNA7-215ENST00000636440 RSF1Q96T23 1441 aaPredicted RBP31.65■■■□□ 2.66
CHRNA7-215ENST00000636440 NESP48681 1621 aa31.64■■■□□ 2.66
CHRNA7-215ENST00000636440 LAMC3Q9Y6N6 1575 aa31.61■■■□□ 2.65
CHRNA7-215ENST00000636440 CUX2O14529 1486 aa31.55■■■□□ 2.64
CHRNA7-215ENST00000636440 CADPSQ9ULU8 1353 aa31.44■■■□□ 2.62
CHRNA7-215ENST00000636440 TOP2AP11388 1531 aaKnown RBP31.43■■■□□ 2.62
CHRNA7-215ENST00000636440 PDS5BQ9NTI5 1447 aa31.41■■■□□ 2.62
CHRNA7-215ENST00000636440 THOC2Q8NI27 1593 aaKnown RBP31.3■■■□□ 2.6
CHRNA7-215ENST00000636440 KIF21AQ7Z4S6 1674 aa31.26■■■□□ 2.6
CHRNA7-215ENST00000636440 CFTRP13569 1480 aa31.21■■■□□ 2.59
CHRNA7-215ENST00000636440 MRC2Q9UBG0 1479 aa31.09■■■□□ 2.57
CHRNA7-215ENST00000636440 CEP164Q9UPV0 1460 aa31.06■■■□□ 2.56
CHRNA7-215ENST00000636440 FANCD2Q9BXW9 1451 aa31.05■■■□□ 2.56
CHRNA7-215ENST00000636440 WDR62O43379 1518 aa31.03■■■□□ 2.56
CHRNA7-215ENST00000636440 CCDC88BA6NC98 1476 aa31.02■■■□□ 2.56
CHRNA7-215ENST00000636440 DNAJC5Q9H3Z4 198 aa30.94■■■□□ 2.54
CHRNA7-215ENST00000636440 PRDM2Q13029 1718 aa30.9■■■□□ 2.54
CHRNA7-215ENST00000636440 URB2Q14146 1524 aaKnown RBP30.75■■■□□ 2.51
CHRNA7-215ENST00000636440 ABCC8Q09428 1581 aa30.57■■■□□ 2.48
CHRNA7-215ENST00000636440 TOPBP1Q92547 1522 aa30.52■■■□□ 2.48
CHRNA7-215ENST00000636440 DNMBPQ6XZF7 1577 aa30.47■■■□□ 2.47
CHRNA7-215ENST00000636440 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.47
CHRNA7-215ENST00000636440 IFT140Q96RY7 1462 aa30.44■■■□□ 2.46
CHRNA7-215ENST00000636440 ZNF608Q9ULD9 1512 aaPredicted RBP30.27■■■□□ 2.44
CHRNA7-215ENST00000636440 POLA1P09884 1462 aaPredicted RBP30.24■■■□□ 2.43
CHRNA7-215ENST00000636440 TARBP1Q13395 1621 aaKnown RBP30.22■■■□□ 2.43
CHRNA7-215ENST00000636440 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
CHRNA7-215ENST00000636440 CUX1P39880 1505 aa30.15■■■□□ 2.42
CHRNA7-215ENST00000636440 OSCARQ8IYS5 282 aa30.13■■■□□ 2.41
CHRNA7-215ENST00000636440 SOGA1O94964 1423 aa30.1■■■□□ 2.41
CHRNA7-215ENST00000636440 FGD5Q6ZNL6 1462 aa30.1■■■□□ 2.41
CHRNA7-215ENST00000636440 WDR97A6NE52 1622 aa30.06■■■□□ 2.4
CHRNA7-215ENST00000636440 RAD54L2Q9Y4B4 1467 aa30.06■■■□□ 2.4
CHRNA7-215ENST00000636440 AQRO60306 1485 aaKnown RBP eCLIP30.05■■■□□ 2.4
CHRNA7-215ENST00000636440 TDRD9Q8NDG6 1382 aaKnown RBP29.93■■■□□ 2.38
CHRNA7-215ENST00000636440 WRNQ14191 1432 aaPredicted RBP eCLIP29.85■■■□□ 2.37
CHRNA7-215ENST00000636440 ABCA10Q8WWZ4 1543 aa29.84■■■□□ 2.37
CHRNA7-215ENST00000636440 TOP2BQ02880 1626 aa29.83■■■□□ 2.37
CHRNA7-215ENST00000636440 BIVM-ERCC5R4GMW8 1640 aa29.82■■■□□ 2.36
CHRNA7-215ENST00000636440 GRIN2BQ13224 1484 aa29.81■■■□□ 2.36
CHRNA7-215ENST00000636440 CHD1O14646 1710 aa29.8■■■□□ 2.36
CHRNA7-215ENST00000636440 MAGI1Q96QZ7 1491 aaPredicted RBP29.8■■■□□ 2.36
CHRNA7-215ENST00000636440 SNAPC4Q5SXM2 1469 aa29.78■■■□□ 2.36
CHRNA7-215ENST00000636440 SYNJ1O43426 1573 aa29.76■■■□□ 2.35
CHRNA7-215ENST00000636440 GAPVD1Q14C86 1478 aa29.75■■■□□ 2.35
CHRNA7-215ENST00000636440 ABCA5Q8WWZ7 1642 aa29.73■■■□□ 2.35
CHRNA7-215ENST00000636440 FBLN2P98095 1184 aa29.7■■■□□ 2.35
CHRNA7-215ENST00000636440 PBRM1Q86U86 1689 aa29.68■■■□□ 2.34
CHRNA7-215ENST00000636440 SYNJ2O15056 1496 aa29.68■■■□□ 2.34
CHRNA7-215ENST00000636440 RIMBP3CA6NJZ7 1639 aa29.65■■■□□ 2.34
CHRNA7-215ENST00000636440 RIMBP3BA6NNM3 1639 aa29.65■■■□□ 2.34
CHRNA7-215ENST00000636440 RIMBP3Q9UFD9 1639 aa29.65■■■□□ 2.34
CHRNA7-215ENST00000636440 TRIM41Q8WV44 630 aa29.65■■■□□ 2.34
CHRNA7-215ENST00000636440 ARHGEF11O15085 1522 aa29.64■■■□□ 2.34
CHRNA7-215ENST00000636440 CHMP7Q8WUX9 453 aaPredicted RBP29.63■■■□□ 2.33
CHRNA7-215ENST00000636440 CLASP1Q7Z460 1538 aa29.55■■■□□ 2.32
CHRNA7-215ENST00000636440 ERICH3Q5RHP9 1530 aa29.49■■■□□ 2.31
CHRNA7-215ENST00000636440 ADAMTS12P58397 1594 aa29.47■■■□□ 2.31
CHRNA7-215ENST00000636440 GRIN2AQ12879 1464 aa29.42■■■□□ 2.3
CHRNA7-215ENST00000636440 FHAD1B1AJZ9 1412 aa29.42■■■□□ 2.3
CHRNA7-215ENST00000636440 ARAP1Q96P48 1450 aa29.37■■■□□ 2.29
CHRNA7-215ENST00000636440 NUP160Q12769 1436 aa29.34■■■□□ 2.29
CHRNA7-215ENST00000636440 CYB5RLQ6IPT4 315 aa29.32■■■□□ 2.28
CHRNA7-215ENST00000636440 KIF27Q86VH2 1401 aa29.27■■■□□ 2.28
CHRNA7-215ENST00000636440 CEP170Q5SW79 1584 aa29.26■■■□□ 2.28
CHRNA7-215ENST00000636440 IGF1RP08069 1367 aa29.18■■■□□ 2.26
CHRNA7-215ENST00000636440 SHROOM2Q13796 1616 aa29.15■■■□□ 2.26
CHRNA7-215ENST00000636440 CUL7Q14999 1698 aa29.14■■■□□ 2.26
CHRNA7-215ENST00000636440 RUSC2Q8N2Y8 1516 aa29.04■■■□□ 2.24
CHRNA7-215ENST00000636440 ERCC6L2Q5T890 1561 aa29.03■■■□□ 2.24
CHRNA7-215ENST00000636440 JPH4Q96JJ6 628 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms