RNA–Protein interactions for RNA: ENST00000636411.1

POLR1D-215, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 5

Gene POLR1D, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-215ENST00000636411 NISCHQ9Y2I1 1504 aa10.99□□□□□ -0.65
POLR1D-215ENST00000636411 ABCC9O60706 1549 aa10.37□□□□□ -0.75
POLR1D-215ENST00000636411 DNAJC5BQ9UF47 199 aa9.95□□□□□ -0.82
POLR1D-215ENST00000636411 CCDC180Q9P1Z9 1646 aa9.93□□□□□ -0.82
POLR1D-215ENST00000636411 PABPN1Q86U42 306 aaKnown RBP eCLIP9.62□□□□□ -0.87
POLR1D-215ENST00000636411 RB1CC1Q8TDY2 1594 aa9.59□□□□□ -0.87
POLR1D-215ENST00000636411 DCAF8L2P0C7V8 631 aa9.51□□□□□ -0.89
POLR1D-215ENST00000636411 UNC13AQ9UPW8 1703 aa9.51□□□□□ -0.89
POLR1D-215ENST00000636411 NACADO15069 1562 aa9.41□□□□□ -0.9
POLR1D-215ENST00000636411 BICRAQ9NZM4 1560 aa9.41□□□□□ -0.9
POLR1D-215ENST00000636411 CC2D2AQ9P2K1 1620 aa9.29□□□□□ -0.92
POLR1D-215ENST00000636411 CECR2Q9BXF3 1484 aa9.28□□□□□ -0.92
POLR1D-215ENST00000636411 SCRIBQ14160 1630 aa9.23□□□□□ -0.93
POLR1D-215ENST00000636411 EIF4G1Q04637 1599 aaKnown RBP9.17□□□□□ -0.94
POLR1D-215ENST00000636411 DNAJC5Q9H3Z4 198 aa9.17□□□□□ -0.94
POLR1D-215ENST00000636411 MYO15BQ96JP2 1530 aa9.09□□□□□ -0.95
POLR1D-215ENST00000636411 ZCCHC6Q5VYS8 1495 aaKnown RBP9.07□□□□□ -0.96
POLR1D-215ENST00000636411 SHROOM4Q9ULL8 1493 aa9.02□□□□□ -0.97
POLR1D-215ENST00000636411 DCAF1Q9Y4B6 1507 aa8.93□□□□□ -0.98
POLR1D-215ENST00000636411 ERCC6Q03468 1493 aa8.89□□□□□ -0.99
POLR1D-215ENST00000636411 CUX2O14529 1486 aa8.86□□□□□ -0.99
POLR1D-215ENST00000636411 NESP48681 1621 aa8.86□□□□□ -0.99
POLR1D-215ENST00000636411 TRIM41Q8WV44 630 aa8.85□□□□□ -0.99
POLR1D-215ENST00000636411 SMARCA2P51531 1590 aa8.78□□□□□ -1
POLR1D-215ENST00000636411 THOC2Q8NI27 1593 aaKnown RBP8.75□□□□□ -1.01
POLR1D-215ENST00000636411 ATAD2BQ9ULI0 1458 aa8.71□□□□□ -1.01
POLR1D-215ENST00000636411 KIF21AQ7Z4S6 1674 aa8.71□□□□□ -1.02
POLR1D-215ENST00000636411 NCAPD3P42695 1498 aa8.7□□□□□ -1.02
POLR1D-215ENST00000636411 SMARCA4P51532 1647 aa8.67□□□□□ -1.02
POLR1D-215ENST00000636411 HMGXB3Q12766 1538 aa8.64□□□□□ -1.03
POLR1D-215ENST00000636411 BAZ1BQ9UIG0 1483 aaKnown RBP8.63□□□□□ -1.03
POLR1D-215ENST00000636411 BAZ1AQ9NRL2 1556 aaPredicted RBP8.57□□□□□ -1.04
POLR1D-215ENST00000636411 LAMC3Q9Y6N6 1575 aa8.56□□□□□ -1.04
POLR1D-215ENST00000636411 MROH2BQ7Z745 1585 aa8.55□□□□□ -1.04
POLR1D-215ENST00000636411 MRC2Q9UBG0 1479 aa8.52□□□□□ -1.05
POLR1D-215ENST00000636411 WDR62O43379 1518 aa8.5□□□□□ -1.05
POLR1D-215ENST00000636411 PDS5BQ9NTI5 1447 aa8.5□□□□□ -1.05
POLR1D-215ENST00000636411 PEG3Q9GZU2 1588 aa8.48□□□□□ -1.05
POLR1D-215ENST00000636411 WIZO95785 1651 aa8.47□□□□□ -1.05
POLR1D-215ENST00000636411 RIMBP3CA6NJZ7 1639 aa8.47□□□□□ -1.05
POLR1D-215ENST00000636411 RIMBP3BA6NNM3 1639 aa8.47□□□□□ -1.05
POLR1D-215ENST00000636411 RIMBP3Q9UFD9 1639 aa8.47□□□□□ -1.05
POLR1D-215ENST00000636411 CADPSQ9ULU8 1353 aa8.45□□□□□ -1.06
POLR1D-215ENST00000636411 CEP164Q9UPV0 1460 aa8.44□□□□□ -1.06
POLR1D-215ENST00000636411 FANCD2Q9BXW9 1451 aa8.42□□□□□ -1.06
POLR1D-215ENST00000636411 URB2Q14146 1524 aaKnown RBP8.41□□□□□ -1.06
POLR1D-215ENST00000636411 OSCARQ8IYS5 282 aa8.41□□□□□ -1.06
POLR1D-215ENST00000636411 ARHGEF11O15085 1522 aa8.39□□□□□ -1.07
POLR1D-215ENST00000636411 ZNF608Q9ULD9 1512 aaPredicted RBP8.39□□□□□ -1.07
POLR1D-215ENST00000636411 TRHP20396 242 aaPredicted RBP8.35□□□□□ -1.07
POLR1D-215ENST00000636411 CYB5RLQ6IPT4 315 aa8.34□□□□□ -1.07
POLR1D-215ENST00000636411 ARAP1Q96P48 1450 aa8.32□□□□□ -1.08
POLR1D-215ENST00000636411 CHD1O14646 1710 aa8.32□□□□□ -1.08
POLR1D-215ENST00000636411 EIF4G3O43432 1585 aaKnown RBP8.31□□□□□ -1.08
POLR1D-215ENST00000636411 CFTRP13569 1480 aa8.3□□□□□ -1.08
POLR1D-215ENST00000636411 FBLN2P98095 1184 aa8.26□□□□□ -1.09
POLR1D-215ENST00000636411 TOP2AP11388 1531 aaKnown RBP8.25□□□□□ -1.09
POLR1D-215ENST00000636411 AEBP2Q6ZN18 517 aaPredicted RBP8.25□□□□□ -1.09
POLR1D-215ENST00000636411 AQRO60306 1485 aaKnown RBP eCLIP8.25□□□□□ -1.09
POLR1D-215ENST00000636411 TOPBP1Q92547 1522 aa8.24□□□□□ -1.09
POLR1D-215ENST00000636411 PRDM2Q13029 1718 aa8.24□□□□□ -1.09
POLR1D-215ENST00000636411 IFT140Q96RY7 1462 aa8.23□□□□□ -1.09
POLR1D-215ENST00000636411 RSF1Q96T23 1441 aaPredicted RBP8.21□□□□□ -1.09
POLR1D-215ENST00000636411 RAD54L2Q9Y4B4 1467 aa8.19□□□□□ -1.1
POLR1D-215ENST00000636411 TARBP1Q13395 1621 aaKnown RBP8.18□□□□□ -1.1
POLR1D-215ENST00000636411 CCDC88BA6NC98 1476 aa8.18□□□□□ -1.1
POLR1D-215ENST00000636411 SNAPC4Q5SXM2 1469 aa8.16□□□□□ -1.1
POLR1D-215ENST00000636411 DNMBPQ6XZF7 1577 aa8.16□□□□□ -1.1
POLR1D-215ENST00000636411 TDRD9Q8NDG6 1382 aaKnown RBP8.16□□□□□ -1.1
POLR1D-215ENST00000636411 CLASP1Q7Z460 1538 aa8.14□□□□□ -1.11
POLR1D-215ENST00000636411 POLA1P09884 1462 aaPredicted RBP8.14□□□□□ -1.11
POLR1D-215ENST00000636411 ERCC6L2Q5T890 1561 aa8.13□□□□□ -1.11
POLR1D-215ENST00000636411 FGD5Q6ZNL6 1462 aa8.08□□□□□ -1.12
POLR1D-215ENST00000636411 GAPVD1Q14C86 1478 aa8.07□□□□□ -1.12
POLR1D-215ENST00000636411 SYNJ1O43426 1573 aa8.07□□□□□ -1.12
POLR1D-215ENST00000636411 SOGA1O94964 1423 aa8.06□□□□□ -1.12
POLR1D-215ENST00000636411 PBRM1Q86U86 1689 aa8.05□□□□□ -1.12
POLR1D-215ENST00000636411 CHMP7Q8WUX9 453 aaPredicted RBP8.05□□□□□ -1.12
POLR1D-215ENST00000636411 CUX1P39880 1505 aa8.04□□□□□ -1.12
POLR1D-215ENST00000636411 WDR97A6NE52 1622 aa8.03□□□□□ -1.12
POLR1D-215ENST00000636411 ABCC8Q09428 1581 aa8.03□□□□□ -1.12
POLR1D-215ENST00000636411 SYNJ2O15056 1496 aa8.01□□□□□ -1.13
POLR1D-215ENST00000636411 KIF13AQ9H1H9 1805 aa8.01□□□□□ -1.13
POLR1D-215ENST00000636411 GRIN2BQ13224 1484 aa8□□□□□ -1.13
POLR1D-215ENST00000636411 MAGI1Q96QZ7 1491 aaPredicted RBP8□□□□□ -1.13
POLR1D-215ENST00000636411 CEP170Q5SW79 1584 aa7.99□□□□□ -1.13
POLR1D-215ENST00000636411 ILDR1Q86SU0 546 aaPredicted RBP7.99□□□□□ -1.13
POLR1D-215ENST00000636411 ABCA5Q8WWZ7 1642 aa7.96□□□□□ -1.13
POLR1D-215ENST00000636411 ADAMTS12P58397 1594 aa7.94□□□□□ -1.14
POLR1D-215ENST00000636411 GRIN2AQ12879 1464 aa7.94□□□□□ -1.14
POLR1D-215ENST00000636411 KDM4FA0A1W2PPD8 638 aa7.93□□□□□ -1.14
POLR1D-215ENST00000636411 TSPOAP1O95153 1857 aa7.93□□□□□ -1.14
POLR1D-215ENST00000636411 SHROOM2Q13796 1616 aa7.9□□□□□ -1.14
POLR1D-215ENST00000636411 ABCA10Q8WWZ4 1543 aa7.89□□□□□ -1.15
POLR1D-215ENST00000636411 TTBK1Q5TCY1 1321 aaPredicted RBP7.89□□□□□ -1.15
POLR1D-215ENST00000636411 FAM69CQ0P6D2 419 aa7.89□□□□□ -1.15
POLR1D-215ENST00000636411 KDM6BO15054 1643 aa7.89□□□□□ -1.15
POLR1D-215ENST00000636411 DIP2BQ9P265 1576 aa7.88□□□□□ -1.15
POLR1D-215ENST00000636411 NUP160Q12769 1436 aa7.88□□□□□ -1.15
POLR1D-215ENST00000636411 PRG4Q92954 1404 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms