RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 NISCHQ9Y2I1 1504 aa12.83□□□□□ -0.35
CHD2-224ENST00000636410 CCDC180Q9P1Z9 1646 aa11.45□□□□□ -0.58
CHD2-224ENST00000636410 ABCC9O60706 1549 aa10.99□□□□□ -0.65
CHD2-224ENST00000636410 ZCCHC6Q5VYS8 1495 aaKnown RBP10.74□□□□□ -0.69
CHD2-224ENST00000636410 NACADO15069 1562 aa10.68□□□□□ -0.7
CHD2-224ENST00000636410 RB1CC1Q8TDY2 1594 aa10.67□□□□□ -0.7
CHD2-224ENST00000636410 MYO15BQ96JP2 1530 aa10.66□□□□□ -0.7
CHD2-224ENST00000636410 DCAF1Q9Y4B6 1507 aa10.65□□□□□ -0.7
CHD2-224ENST00000636410 DCAF8L2P0C7V8 631 aa10.56□□□□□ -0.72
CHD2-224ENST00000636410 UNC13AQ9UPW8 1703 aa10.48□□□□□ -0.73
CHD2-224ENST00000636410 SCRIBQ14160 1630 aa10.4□□□□□ -0.75
CHD2-224ENST00000636410 BICRAQ9NZM4 1560 aa10.34□□□□□ -0.75
CHD2-224ENST00000636410 SHROOM4Q9ULL8 1493 aa10.26□□□□□ -0.77
CHD2-224ENST00000636410 PABPN1Q86U42 306 aaKnown RBP eCLIP10.22□□□□□ -0.77
CHD2-224ENST00000636410 EIF4G1Q04637 1599 aaKnown RBP10.05□□□□□ -0.8
CHD2-224ENST00000636410 CC2D2AQ9P2K1 1620 aa9.98□□□□□ -0.81
CHD2-224ENST00000636410 SMARCA4P51532 1647 aa9.96□□□□□ -0.81
CHD2-224ENST00000636410 CECR2Q9BXF3 1484 aa9.96□□□□□ -0.82
CHD2-224ENST00000636410 BAZ1AQ9NRL2 1556 aaPredicted RBP9.96□□□□□ -0.82
CHD2-224ENST00000636410 DNAJC5BQ9UF47 199 aa9.91□□□□□ -0.82
CHD2-224ENST00000636410 MROH2BQ7Z745 1585 aa9.88□□□□□ -0.83
CHD2-224ENST00000636410 SMARCA2P51531 1590 aa9.87□□□□□ -0.83
CHD2-224ENST00000636410 PEG3Q9GZU2 1588 aa9.87□□□□□ -0.83
CHD2-224ENST00000636410 ATAD2BQ9ULI0 1458 aa9.84□□□□□ -0.83
CHD2-224ENST00000636410 HMGXB3Q12766 1538 aa9.83□□□□□ -0.84
CHD2-224ENST00000636410 WIZO95785 1651 aa9.81□□□□□ -0.84
CHD2-224ENST00000636410 NCAPD3P42695 1498 aa9.81□□□□□ -0.84
CHD2-224ENST00000636410 RSF1Q96T23 1441 aaPredicted RBP9.79□□□□□ -0.84
CHD2-224ENST00000636410 BAZ1BQ9UIG0 1483 aaKnown RBP9.78□□□□□ -0.84
CHD2-224ENST00000636410 TOP2AP11388 1531 aaKnown RBP9.72□□□□□ -0.85
CHD2-224ENST00000636410 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
CHD2-224ENST00000636410 PRDM2Q13029 1718 aa9.56□□□□□ -0.88
CHD2-224ENST00000636410 CCDC88BA6NC98 1476 aa9.56□□□□□ -0.88
CHD2-224ENST00000636410 SUPT5HO00267 1087 aaKnown RBP9.56□□□□□ -0.88
CHD2-224ENST00000636410 NESP48681 1621 aa9.54□□□□□ -0.88
CHD2-224ENST00000636410 CADPSQ9ULU8 1353 aa9.51□□□□□ -0.89
CHD2-224ENST00000636410 CFTRP13569 1480 aa9.51□□□□□ -0.89
CHD2-224ENST00000636410 KIF21AQ7Z4S6 1674 aa9.51□□□□□ -0.89
CHD2-224ENST00000636410 PDS5BQ9NTI5 1447 aa9.47□□□□□ -0.89
CHD2-224ENST00000636410 ERCC6Q03468 1493 aa9.47□□□□□ -0.89
CHD2-224ENST00000636410 THOC2Q8NI27 1593 aaKnown RBP9.44□□□□□ -0.9
CHD2-224ENST00000636410 FANCD2Q9BXW9 1451 aa9.42□□□□□ -0.9
CHD2-224ENST00000636410 CEP164Q9UPV0 1460 aa9.42□□□□□ -0.9
CHD2-224ENST00000636410 MRC2Q9UBG0 1479 aa9.39□□□□□ -0.91
CHD2-224ENST00000636410 WDR62O43379 1518 aa9.37□□□□□ -0.91
CHD2-224ENST00000636410 CUX2O14529 1486 aa9.35□□□□□ -0.91
CHD2-224ENST00000636410 DNMBPQ6XZF7 1577 aa9.33□□□□□ -0.92
CHD2-224ENST00000636410 URB2Q14146 1524 aaKnown RBP9.33□□□□□ -0.92
CHD2-224ENST00000636410 ABCC8Q09428 1581 aa9.31□□□□□ -0.92
CHD2-224ENST00000636410 TOPBP1Q92547 1522 aa9.3□□□□□ -0.92
CHD2-224ENST00000636410 BIVM-ERCC5R4GMW8 1640 aa9.27□□□□□ -0.92
CHD2-224ENST00000636410 CUX1P39880 1505 aa9.27□□□□□ -0.93
CHD2-224ENST00000636410 TOP2BQ02880 1626 aa9.25□□□□□ -0.93
CHD2-224ENST00000636410 SYNJ1O43426 1573 aa9.24□□□□□ -0.93
CHD2-224ENST00000636410 WRNQ14191 1432 aaPredicted RBP eCLIP9.24□□□□□ -0.93
CHD2-224ENST00000636410 POLA1P09884 1462 aaPredicted RBP9.23□□□□□ -0.93
CHD2-224ENST00000636410 FGD5Q6ZNL6 1462 aa9.22□□□□□ -0.93
CHD2-224ENST00000636410 WDR97A6NE52 1622 aa9.22□□□□□ -0.93
CHD2-224ENST00000636410 TARBP1Q13395 1621 aaKnown RBP9.22□□□□□ -0.93
CHD2-224ENST00000636410 IFT140Q96RY7 1462 aa9.21□□□□□ -0.93
CHD2-224ENST00000636410 EIF4G3O43432 1585 aaKnown RBP9.18□□□□□ -0.94
CHD2-224ENST00000636410 SOGA1O94964 1423 aa9.16□□□□□ -0.94
CHD2-224ENST00000636410 RAD54L2Q9Y4B4 1467 aa9.15□□□□□ -0.94
CHD2-224ENST00000636410 ABCA10Q8WWZ4 1543 aa9.15□□□□□ -0.95
CHD2-224ENST00000636410 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.95
CHD2-224ENST00000636410 ABCA5Q8WWZ7 1642 aa9.14□□□□□ -0.95
CHD2-224ENST00000636410 PBRM1Q86U86 1689 aa9.13□□□□□ -0.95
CHD2-224ENST00000636410 AQRO60306 1485 aaKnown RBP eCLIP9.08□□□□□ -0.966e-9■■□□□ 14
CHD2-224ENST00000636410 TDRD9Q8NDG6 1382 aaKnown RBP9.08□□□□□ -0.96
CHD2-224ENST00000636410 GRIN2BQ13224 1484 aa9.07□□□□□ -0.96
CHD2-224ENST00000636410 GAPVD1Q14C86 1478 aa9.07□□□□□ -0.96
CHD2-224ENST00000636410 CHD1O14646 1710 aa9.05□□□□□ -0.96
CHD2-224ENST00000636410 MAGI1Q96QZ7 1491 aaPredicted RBP9.05□□□□□ -0.96
CHD2-224ENST00000636410 ERICH3Q5RHP9 1530 aa9.05□□□□□ -0.96
CHD2-224ENST00000636410 ADAMTS12P58397 1594 aa9.04□□□□□ -0.96
CHD2-224ENST00000636410 SNAPC4Q5SXM2 1469 aa9.04□□□□□ -0.96
CHD2-224ENST00000636410 TRIM41Q8WV44 630 aa9.04□□□□□ -0.96
CHD2-224ENST00000636410 KIF27Q86VH2 1401 aa9.03□□□□□ -0.96
CHD2-224ENST00000636410 CUL7Q14999 1698 aa9.03□□□□□ -0.96
CHD2-224ENST00000636410 SYNJ2O15056 1496 aa9□□□□□ -0.97
CHD2-224ENST00000636410 CHIC1Q5VXU3 224 aa8.99□□□□□ -0.97
CHD2-224ENST00000636410 FHAD1B1AJZ9 1412 aa8.97□□□□□ -0.97
CHD2-224ENST00000636410 RUSC2Q8N2Y8 1516 aa8.97□□□□□ -0.97
CHD2-224ENST00000636410 EEA1Q15075 1411 aa8.96□□□□□ -0.98
CHD2-224ENST00000636410 GRIN2AQ12879 1464 aa8.96□□□□□ -0.98
CHD2-224ENST00000636410 IGF1RP08069 1367 aa8.95□□□□□ -0.98
CHD2-224ENST00000636410 CLASP1Q7Z460 1538 aa8.93□□□□□ -0.98
CHD2-224ENST00000636410 CEP170Q5SW79 1584 aa8.93□□□□□ -0.98
CHD2-224ENST00000636410 FBLN2P98095 1184 aa8.92□□□□□ -0.98
CHD2-224ENST00000636410 CHMP7Q8WUX9 453 aaPredicted RBP8.92□□□□□ -0.98
CHD2-224ENST00000636410 NUP160Q12769 1436 aa8.9□□□□□ -0.98
CHD2-224ENST00000636410 CARMIL1Q5VZK9 1371 aa8.9□□□□□ -0.98
CHD2-224ENST00000636410 OSCARQ8IYS5 282 aa8.9□□□□□ -0.98
CHD2-224ENST00000636410 CTTNBP2Q8WZ74 1663 aa8.9□□□□□ -0.98
CHD2-224ENST00000636410 PRXQ9BXM0 1461 aa8.89□□□□□ -0.99
CHD2-224ENST00000636410 RAPGEF2Q9Y4G8 1499 aa8.89□□□□□ -0.99
CHD2-224ENST00000636410 KIF21BO75037 1637 aa8.89□□□□□ -0.99
CHD2-224ENST00000636410 SHROOM2Q13796 1616 aa8.87□□□□□ -0.99
CHD2-224ENST00000636410 CSRNP3Q8WYN3 585 aa8.85□□□□□ -0.99
CHD2-224ENST00000636410 DNAJC5Q9H3Z4 198 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms