RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-231ENST00000636337 NISCHQ9Y2I1 1504 aa25.6■■□□□ 1.69
SPTAN1-231ENST00000636337 ABCC9O60706 1549 aa24.14■■□□□ 1.45
SPTAN1-231ENST00000636337 DNAJC5BQ9UF47 199 aa23.35■■□□□ 1.33
SPTAN1-231ENST00000636337 CCDC180Q9P1Z9 1646 aa23.31■■□□□ 1.32
SPTAN1-231ENST00000636337 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
SPTAN1-231ENST00000636337 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
SPTAN1-231ENST00000636337 NACADO15069 1562 aa22.23■■□□□ 1.15
SPTAN1-231ENST00000636337 UNC13AQ9UPW8 1703 aa22.1■■□□□ 1.13
SPTAN1-231ENST00000636337 DNAJC5Q9H3Z4 198 aa22.01■■□□□ 1.11
SPTAN1-231ENST00000636337 DCAF8L2P0C7V8 631 aa21.99■■□□□ 1.11
SPTAN1-231ENST00000636337 BICRAQ9NZM4 1560 aa21.97■■□□□ 1.11
SPTAN1-231ENST00000636337 CECR2Q9BXF3 1484 aa21.82■■□□□ 1.08
SPTAN1-231ENST00000636337 CC2D2AQ9P2K1 1620 aa21.76■■□□□ 1.07
SPTAN1-231ENST00000636337 MYO15BQ96JP2 1530 aa21.63■■□□□ 1.05
SPTAN1-231ENST00000636337 SHROOM4Q9ULL8 1493 aa21.56■■□□□ 1.04
SPTAN1-231ENST00000636337 EIF4G1Q04637 1599 aaKnown RBP21.5■■□□□ 1.03
SPTAN1-231ENST00000636337 SCRIBQ14160 1630 aa21.24■□□□□ 0.99
SPTAN1-231ENST00000636337 CUX2O14529 1486 aa21.1■□□□□ 0.97
SPTAN1-231ENST00000636337 DCAF1Q9Y4B6 1507 aa21.06■□□□□ 0.96
SPTAN1-231ENST00000636337 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
SPTAN1-231ENST00000636337 ERCC6Q03468 1493 aa20.9■□□□□ 0.94
SPTAN1-231ENST00000636337 TRIM41Q8WV44 630 aa20.76■□□□□ 0.91
SPTAN1-231ENST00000636337 NCAPD3P42695 1498 aa20.53■□□□□ 0.88
SPTAN1-231ENST00000636337 NESP48681 1621 aa20.51■□□□□ 0.87
SPTAN1-231ENST00000636337 THOC2Q8NI27 1593 aaKnown RBP20.45■□□□□ 0.86
SPTAN1-231ENST00000636337 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
SPTAN1-231ENST00000636337 HMGXB3Q12766 1538 aa20.31■□□□□ 0.84
SPTAN1-231ENST00000636337 SMARCA2P51531 1590 aa20.3■□□□□ 0.84
SPTAN1-231ENST00000636337 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
SPTAN1-231ENST00000636337 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
SPTAN1-231ENST00000636337 SMARCA4P51532 1647 aa20.15■□□□□ 0.82
SPTAN1-231ENST00000636337 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.81
SPTAN1-231ENST00000636337 PDS5BQ9NTI5 1447 aa20.11■□□□□ 0.81
SPTAN1-231ENST00000636337 BAZ1AQ9NRL2 1556 aaPredicted RBP20.09■□□□□ 0.81
SPTAN1-231ENST00000636337 MRC2Q9UBG0 1479 aa20■□□□□ 0.79
SPTAN1-231ENST00000636337 OSCARQ8IYS5 282 aa20■□□□□ 0.79
SPTAN1-231ENST00000636337 WDR62O43379 1518 aa19.98■□□□□ 0.79
SPTAN1-231ENST00000636337 PEG3Q9GZU2 1588 aa19.94■□□□□ 0.78
SPTAN1-231ENST00000636337 CADPSQ9ULU8 1353 aa19.87■□□□□ 0.77
SPTAN1-231ENST00000636337 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
SPTAN1-231ENST00000636337 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
SPTAN1-231ENST00000636337 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
SPTAN1-231ENST00000636337 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
SPTAN1-231ENST00000636337 MROH2BQ7Z745 1585 aa19.73■□□□□ 0.75
SPTAN1-231ENST00000636337 ARHGEF11O15085 1522 aa19.71■□□□□ 0.75
SPTAN1-231ENST00000636337 AEBP2Q6ZN18 517 aaPredicted RBP19.69■□□□□ 0.74
SPTAN1-231ENST00000636337 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
SPTAN1-231ENST00000636337 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
SPTAN1-231ENST00000636337 CYB5RLQ6IPT4 315 aa19.62■□□□□ 0.73
SPTAN1-231ENST00000636337 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
SPTAN1-231ENST00000636337 CFTRP13569 1480 aa19.48■□□□□ 0.71
SPTAN1-231ENST00000636337 ARAP1Q96P48 1450 aa19.47■□□□□ 0.71
SPTAN1-231ENST00000636337 WIZO95785 1651 aa19.46■□□□□ 0.71
SPTAN1-231ENST00000636337 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
SPTAN1-231ENST00000636337 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
SPTAN1-231ENST00000636337 CHD1O14646 1710 aa19.33■□□□□ 0.68
SPTAN1-231ENST00000636337 EIF4G3O43432 1585 aaKnown RBP19.32■□□□□ 0.68
SPTAN1-231ENST00000636337 RSF1Q96T23 1441 aaPredicted RBP19.3■□□□□ 0.68
SPTAN1-231ENST00000636337 PRDM2Q13029 1718 aa19.23■□□□□ 0.67
SPTAN1-231ENST00000636337 FBLN2P98095 1184 aa19.23■□□□□ 0.67
SPTAN1-231ENST00000636337 TOPBP1Q92547 1522 aa19.2■□□□□ 0.66
SPTAN1-231ENST00000636337 AQRO60306 1485 aaKnown RBP eCLIP19.18■□□□□ 0.66
SPTAN1-231ENST00000636337 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
SPTAN1-231ENST00000636337 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
SPTAN1-231ENST00000636337 ABCC8Q09428 1581 aa19.07■□□□□ 0.64
SPTAN1-231ENST00000636337 CLASP1Q7Z460 1538 aa19.07■□□□□ 0.64
SPTAN1-231ENST00000636337 DNMBPQ6XZF7 1577 aa19.06■□□□□ 0.64
SPTAN1-231ENST00000636337 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
SPTAN1-231ENST00000636337 ILDR1Q86SU0 546 aaPredicted RBP18.97■□□□□ 0.63
SPTAN1-231ENST00000636337 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
SPTAN1-231ENST00000636337 POLA1P09884 1462 aaPredicted RBP18.96■□□□□ 0.63
SPTAN1-231ENST00000636337 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
SPTAN1-231ENST00000636337 GAPVD1Q14C86 1478 aa18.94■□□□□ 0.62
SPTAN1-231ENST00000636337 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
SPTAN1-231ENST00000636337 CHMP7Q8WUX9 453 aaPredicted RBP18.93■□□□□ 0.62
SPTAN1-231ENST00000636337 RAD54L2Q9Y4B4 1467 aa18.92■□□□□ 0.62
SPTAN1-231ENST00000636337 MAGI1Q96QZ7 1491 aaPredicted RBP18.85■□□□□ 0.61
SPTAN1-231ENST00000636337 SOGA1O94964 1423 aa18.85■□□□□ 0.61
SPTAN1-231ENST00000636337 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
SPTAN1-231ENST00000636337 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
SPTAN1-231ENST00000636337 GRIN2BQ13224 1484 aa18.77■□□□□ 0.6
SPTAN1-231ENST00000636337 KIF13AQ9H1H9 1805 aa18.74■□□□□ 0.59
SPTAN1-231ENST00000636337 ERCC6L2Q5T890 1561 aa18.73■□□□□ 0.59
SPTAN1-231ENST00000636337 FGD5Q6ZNL6 1462 aa18.73■□□□□ 0.59
SPTAN1-231ENST00000636337 KDM4FA0A1W2PPD8 638 aa18.69■□□□□ 0.58
SPTAN1-231ENST00000636337 PBRM1Q86U86 1689 aa18.67■□□□□ 0.58
SPTAN1-231ENST00000636337 CEP170Q5SW79 1584 aa18.61■□□□□ 0.57
SPTAN1-231ENST00000636337 CUX1P39880 1505 aa18.59■□□□□ 0.57
SPTAN1-231ENST00000636337 FAM69CQ0P6D2 419 aa18.55■□□□□ 0.56
SPTAN1-231ENST00000636337 GRIN2AQ12879 1464 aa18.54■□□□□ 0.56
SPTAN1-231ENST00000636337 KDM6BO15054 1643 aa18.52■□□□□ 0.56
SPTAN1-231ENST00000636337 SHROOM2Q13796 1616 aa18.52■□□□□ 0.55
SPTAN1-231ENST00000636337 ABCC10Q5T3U5 1492 aa18.52■□□□□ 0.55
SPTAN1-231ENST00000636337 ABCA5Q8WWZ7 1642 aa18.51■□□□□ 0.55
SPTAN1-231ENST00000636337 NUP160Q12769 1436 aa18.5■□□□□ 0.55
SPTAN1-231ENST00000636337 DIP2BQ9P265 1576 aa18.46■□□□□ 0.55
SPTAN1-231ENST00000636337 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
SPTAN1-231ENST00000636337 ADAMTS12P58397 1594 aa18.44■□□□□ 0.54
SPTAN1-231ENST00000636337 MAPKBP1O60336 1514 aa18.42■□□□□ 0.54
SPTAN1-231ENST00000636337 PRG4Q92954 1404 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms