RNA–Protein interactions for RNA: ENST00000636257.1

SPTAN1-230, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-230ENST00000636257 NISCHQ9Y2I1 1504 aa32.73■■■□□ 2.83
SPTAN1-230ENST00000636257 ABCC9O60706 1549 aa30.84■■■□□ 2.53
SPTAN1-230ENST00000636257 CCDC180Q9P1Z9 1646 aa29.94■■■□□ 2.38
SPTAN1-230ENST00000636257 DNAJC5BQ9UF47 199 aa29.87■■■□□ 2.37
SPTAN1-230ENST00000636257 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
SPTAN1-230ENST00000636257 NACADO15069 1562 aa28.5■■■□□ 2.15
SPTAN1-230ENST00000636257 PABPN1Q86U42 306 aaKnown RBP eCLIP28.48■■■□□ 2.15
SPTAN1-230ENST00000636257 UNC13AQ9UPW8 1703 aa28.39■■■□□ 2.14
SPTAN1-230ENST00000636257 DNAJC5Q9H3Z4 198 aa28.24■■■□□ 2.11
SPTAN1-230ENST00000636257 BICRAQ9NZM4 1560 aa28.18■■■□□ 2.1
SPTAN1-230ENST00000636257 CECR2Q9BXF3 1484 aa27.92■■■□□ 2.06
SPTAN1-230ENST00000636257 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
SPTAN1-230ENST00000636257 CC2D2AQ9P2K1 1620 aa27.88■■■□□ 2.05
SPTAN1-230ENST00000636257 MYO15BQ96JP2 1530 aa27.78■■■□□ 2.04
SPTAN1-230ENST00000636257 SHROOM4Q9ULL8 1493 aa27.72■■■□□ 2.03
SPTAN1-230ENST00000636257 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
SPTAN1-230ENST00000636257 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
SPTAN1-230ENST00000636257 CUX2O14529 1486 aa27.1■■□□□ 1.93
SPTAN1-230ENST00000636257 DCAF1Q9Y4B6 1507 aa27.02■■□□□ 1.92
SPTAN1-230ENST00000636257 ZCCHC6Q5VYS8 1495 aaKnown RBP26.91■■□□□ 1.9
SPTAN1-230ENST00000636257 ERCC6Q03468 1493 aa26.71■■□□□ 1.87
SPTAN1-230ENST00000636257 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
SPTAN1-230ENST00000636257 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
SPTAN1-230ENST00000636257 THOC2Q8NI27 1593 aaKnown RBP26.24■■□□□ 1.79
SPTAN1-230ENST00000636257 NESP48681 1621 aa26.21■■□□□ 1.79
SPTAN1-230ENST00000636257 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
SPTAN1-230ENST00000636257 HMGXB3Q12766 1538 aa26.04■■□□□ 1.76
SPTAN1-230ENST00000636257 SMARCA2P51531 1590 aa25.95■■□□□ 1.75
SPTAN1-230ENST00000636257 KIF21AQ7Z4S6 1674 aa25.92■■□□□ 1.74
SPTAN1-230ENST00000636257 LAMC3Q9Y6N6 1575 aa25.91■■□□□ 1.74
SPTAN1-230ENST00000636257 SMARCA4P51532 1647 aa25.8■■□□□ 1.72
SPTAN1-230ENST00000636257 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.71
SPTAN1-230ENST00000636257 PDS5BQ9NTI5 1447 aa25.74■■□□□ 1.71
SPTAN1-230ENST00000636257 BAZ1BQ9UIG0 1483 aaKnown RBP25.73■■□□□ 1.71
SPTAN1-230ENST00000636257 WDR62O43379 1518 aa25.62■■□□□ 1.69
SPTAN1-230ENST00000636257 MRC2Q9UBG0 1479 aa25.6■■□□□ 1.69
SPTAN1-230ENST00000636257 OSCARQ8IYS5 282 aa25.59■■□□□ 1.69
SPTAN1-230ENST00000636257 PEG3Q9GZU2 1588 aa25.58■■□□□ 1.69
SPTAN1-230ENST00000636257 RIMBP3CA6NJZ7 1639 aa25.48■■□□□ 1.67
SPTAN1-230ENST00000636257 RIMBP3BA6NNM3 1639 aa25.48■■□□□ 1.67
SPTAN1-230ENST00000636257 RIMBP3Q9UFD9 1639 aa25.48■■□□□ 1.67
SPTAN1-230ENST00000636257 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
SPTAN1-230ENST00000636257 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
SPTAN1-230ENST00000636257 ARHGEF11O15085 1522 aa25.26■■□□□ 1.63
SPTAN1-230ENST00000636257 MROH2BQ7Z745 1585 aa25.19■■□□□ 1.62
SPTAN1-230ENST00000636257 AEBP2Q6ZN18 517 aaPredicted RBP25.16■■□□□ 1.62
SPTAN1-230ENST00000636257 FANCD2Q9BXW9 1451 aa25.14■■□□□ 1.61
SPTAN1-230ENST00000636257 TRHP20396 242 aaPredicted RBP25.09■■□□□ 1.61
SPTAN1-230ENST00000636257 CYB5RLQ6IPT4 315 aa25.03■■□□□ 1.6
SPTAN1-230ENST00000636257 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
SPTAN1-230ENST00000636257 CFTRP13569 1480 aa24.93■■□□□ 1.58
SPTAN1-230ENST00000636257 ARAP1Q96P48 1450 aa24.93■■□□□ 1.58
SPTAN1-230ENST00000636257 ZNF608Q9ULD9 1512 aaPredicted RBP24.87■■□□□ 1.57
SPTAN1-230ENST00000636257 WIZO95785 1651 aa24.87■■□□□ 1.57
SPTAN1-230ENST00000636257 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
SPTAN1-230ENST00000636257 CHD1O14646 1710 aa24.78■■□□□ 1.56
SPTAN1-230ENST00000636257 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
SPTAN1-230ENST00000636257 EIF4G3O43432 1585 aaKnown RBP24.74■■□□□ 1.55
SPTAN1-230ENST00000636257 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
SPTAN1-230ENST00000636257 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
SPTAN1-230ENST00000636257 AQRO60306 1485 aaKnown RBP eCLIP24.48■■□□□ 1.51
SPTAN1-230ENST00000636257 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
SPTAN1-230ENST00000636257 TOP2AP11388 1531 aaKnown RBP24.47■■□□□ 1.51
SPTAN1-230ENST00000636257 FBLN2P98095 1184 aa24.47■■□□□ 1.51
SPTAN1-230ENST00000636257 CLASP1Q7Z460 1538 aa24.45■■□□□ 1.5
SPTAN1-230ENST00000636257 ABCC8Q09428 1581 aa24.44■■□□□ 1.5
SPTAN1-230ENST00000636257 DNMBPQ6XZF7 1577 aa24.4■■□□□ 1.5
SPTAN1-230ENST00000636257 SYNJ1O43426 1573 aa24.32■■□□□ 1.48
SPTAN1-230ENST00000636257 ILDR1Q86SU0 546 aaPredicted RBP24.27■■□□□ 1.48
SPTAN1-230ENST00000636257 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
SPTAN1-230ENST00000636257 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
SPTAN1-230ENST00000636257 GAPVD1Q14C86 1478 aa24.22■■□□□ 1.47
SPTAN1-230ENST00000636257 WDR97A6NE52 1622 aa24.18■■□□□ 1.46
SPTAN1-230ENST00000636257 CCDC88BA6NC98 1476 aa24.17■■□□□ 1.46
SPTAN1-230ENST00000636257 MAGI1Q96QZ7 1491 aaPredicted RBP24.15■■□□□ 1.46
SPTAN1-230ENST00000636257 CHMP7Q8WUX9 453 aaPredicted RBP24.14■■□□□ 1.45
SPTAN1-230ENST00000636257 TDRD9Q8NDG6 1382 aaKnown RBP24.14■■□□□ 1.45
SPTAN1-230ENST00000636257 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
SPTAN1-230ENST00000636257 KIF13AQ9H1H9 1805 aa24.08■■□□□ 1.45
SPTAN1-230ENST00000636257 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
SPTAN1-230ENST00000636257 SOGA1O94964 1423 aa24.06■■□□□ 1.44
SPTAN1-230ENST00000636257 GRIN2BQ13224 1484 aa24.01■■□□□ 1.43
SPTAN1-230ENST00000636257 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.42
SPTAN1-230ENST00000636257 PBRM1Q86U86 1689 aa23.92■■□□□ 1.42
SPTAN1-230ENST00000636257 FGD5Q6ZNL6 1462 aa23.92■■□□□ 1.42
SPTAN1-230ENST00000636257 KDM4FA0A1W2PPD8 638 aa23.9■■□□□ 1.42
SPTAN1-230ENST00000636257 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
SPTAN1-230ENST00000636257 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
SPTAN1-230ENST00000636257 CUX1P39880 1505 aa23.74■■□□□ 1.39
SPTAN1-230ENST00000636257 KDM6BO15054 1643 aa23.73■■□□□ 1.39
SPTAN1-230ENST00000636257 ABCC10Q5T3U5 1492 aa23.72■■□□□ 1.39
SPTAN1-230ENST00000636257 ABCA5Q8WWZ7 1642 aa23.72■■□□□ 1.39
SPTAN1-230ENST00000636257 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
SPTAN1-230ENST00000636257 NUP160Q12769 1436 aa23.68■■□□□ 1.38
SPTAN1-230ENST00000636257 FAM69CQ0P6D2 419 aa23.67■■□□□ 1.38
SPTAN1-230ENST00000636257 DIP2BQ9P265 1576 aa23.66■■□□□ 1.38
SPTAN1-230ENST00000636257 MAPKBP1O60336 1514 aa23.64■■□□□ 1.37
SPTAN1-230ENST00000636257 ABCA10Q8WWZ4 1543 aa23.6■■□□□ 1.37
SPTAN1-230ENST00000636257 ADAMTS12P58397 1594 aa23.6■■□□□ 1.37
SPTAN1-230ENST00000636257 HECW2Q9P2P5 1572 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms