RNA–Protein interactions for RNA: ENST00000636221.1

SMARCA2-248, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-248ENST00000636221 NISCHQ9Y2I1 1504 aa9.63□□□□□ -0.87
SMARCA2-248ENST00000636221 CCDC180Q9P1Z9 1646 aa8.58□□□□□ -1.04
SMARCA2-248ENST00000636221 ABCC9O60706 1549 aa8.3□□□□□ -1.08
SMARCA2-248ENST00000636221 DCAF8L2P0C7V8 631 aa8.1□□□□□ -1.11
SMARCA2-248ENST00000636221 RB1CC1Q8TDY2 1594 aa8.02□□□□□ -1.13
SMARCA2-248ENST00000636221 ZCCHC6Q5VYS8 1495 aaKnown RBP8.02□□□□□ -1.13
SMARCA2-248ENST00000636221 NACADO15069 1562 aa8□□□□□ -1.13
SMARCA2-248ENST00000636221 UNC13AQ9UPW8 1703 aa7.95□□□□□ -1.14
SMARCA2-248ENST00000636221 DCAF1Q9Y4B6 1507 aa7.93□□□□□ -1.14
SMARCA2-248ENST00000636221 MYO15BQ96JP2 1530 aa7.93□□□□□ -1.14
SMARCA2-248ENST00000636221 SCRIBQ14160 1630 aa7.85□□□□□ -1.15
SMARCA2-248ENST00000636221 PABPN1Q86U42 306 aaKnown RBP eCLIP7.77□□□□□ -1.17
SMARCA2-248ENST00000636221 BICRAQ9NZM4 1560 aa7.76□□□□□ -1.17
SMARCA2-248ENST00000636221 SHROOM4Q9ULL8 1493 aa7.73□□□□□ -1.17
SMARCA2-248ENST00000636221 EIF4G1Q04637 1599 aaKnown RBP7.55□□□□□ -1.2
SMARCA2-248ENST00000636221 CC2D2AQ9P2K1 1620 aa7.52□□□□□ -1.2
SMARCA2-248ENST00000636221 DNAJC5BQ9UF47 199 aa7.51□□□□□ -1.21
SMARCA2-248ENST00000636221 CECR2Q9BXF3 1484 aa7.5□□□□□ -1.21
SMARCA2-248ENST00000636221 SMARCA4P51532 1647 aa7.49□□□□□ -1.21
SMARCA2-248ENST00000636221 BAZ1AQ9NRL2 1556 aaPredicted RBP7.47□□□□□ -1.21
SMARCA2-248ENST00000636221 MROH2BQ7Z745 1585 aa7.44□□□□□ -1.22
SMARCA2-248ENST00000636221 WIZO95785 1651 aa7.42□□□□□ -1.22
SMARCA2-248ENST00000636221 SMARCA2P51531 1590 aa7.4□□□□□ -1.22
SMARCA2-248ENST00000636221 ATAD2BQ9ULI0 1458 aa7.37□□□□□ -1.23
SMARCA2-248ENST00000636221 PEG3Q9GZU2 1588 aa7.37□□□□□ -1.23
SMARCA2-248ENST00000636221 BAZ1BQ9UIG0 1483 aaKnown RBP7.36□□□□□ -1.23
SMARCA2-248ENST00000636221 RSF1Q96T23 1441 aaPredicted RBP7.35□□□□□ -1.23
SMARCA2-248ENST00000636221 NCAPD3P42695 1498 aa7.35□□□□□ -1.23
SMARCA2-248ENST00000636221 HMGXB3Q12766 1538 aa7.34□□□□□ -1.23
SMARCA2-248ENST00000636221 SUPT5HO00267 1087 aaKnown RBP7.31□□□□□ -1.24
SMARCA2-248ENST00000636221 TOP2AP11388 1531 aaKnown RBP7.29□□□□□ -1.24
SMARCA2-248ENST00000636221 PRDM2Q13029 1718 aa7.23□□□□□ -1.25
SMARCA2-248ENST00000636221 NESP48681 1621 aa7.21□□□□□ -1.26
SMARCA2-248ENST00000636221 CCDC88BA6NC98 1476 aa7.2□□□□□ -1.26
SMARCA2-248ENST00000636221 KIF21AQ7Z4S6 1674 aa7.19□□□□□ -1.26
SMARCA2-248ENST00000636221 LAMC3Q9Y6N6 1575 aa7.19□□□□□ -1.26
SMARCA2-248ENST00000636221 ERCC6Q03468 1493 aa7.16□□□□□ -1.26
SMARCA2-248ENST00000636221 CADPSQ9ULU8 1353 aa7.15□□□□□ -1.26
SMARCA2-248ENST00000636221 PDS5BQ9NTI5 1447 aa7.12□□□□□ -1.27
SMARCA2-248ENST00000636221 CFTRP13569 1480 aa7.11□□□□□ -1.27
SMARCA2-248ENST00000636221 FANCD2Q9BXW9 1451 aa7.1□□□□□ -1.27
SMARCA2-248ENST00000636221 CEP164Q9UPV0 1460 aa7.09□□□□□ -1.27
SMARCA2-248ENST00000636221 THOC2Q8NI27 1593 aaKnown RBP7.08□□□□□ -1.28
SMARCA2-248ENST00000636221 MRC2Q9UBG0 1479 aa7.04□□□□□ -1.28
SMARCA2-248ENST00000636221 WDR62O43379 1518 aa7.01□□□□□ -1.29
SMARCA2-248ENST00000636221 URB2Q14146 1524 aaKnown RBP7.01□□□□□ -1.29
SMARCA2-248ENST00000636221 ABCC8Q09428 1581 aa7.01□□□□□ -1.29
SMARCA2-248ENST00000636221 DNMBPQ6XZF7 1577 aa7□□□□□ -1.29
SMARCA2-248ENST00000636221 CUX2O14529 1486 aa7□□□□□ -1.29
SMARCA2-248ENST00000636221 TOPBP1Q92547 1522 aa6.99□□□□□ -1.29
SMARCA2-248ENST00000636221 CUX1P39880 1505 aa6.97□□□□□ -1.29
SMARCA2-248ENST00000636221 BIVM-ERCC5R4GMW8 1640 aa6.97□□□□□ -1.29
SMARCA2-248ENST00000636221 SYNJ1O43426 1573 aa6.96□□□□□ -1.29
SMARCA2-248ENST00000636221 WRNQ14191 1432 aaPredicted RBP eCLIP6.95□□□□□ -1.3
SMARCA2-248ENST00000636221 TOP2BQ02880 1626 aa6.95□□□□□ -1.3
SMARCA2-248ENST00000636221 FGD5Q6ZNL6 1462 aa6.94□□□□□ -1.3
SMARCA2-248ENST00000636221 TARBP1Q13395 1621 aaKnown RBP6.93□□□□□ -1.3
SMARCA2-248ENST00000636221 POLA1P09884 1462 aaPredicted RBP6.92□□□□□ -1.3
SMARCA2-248ENST00000636221 SOGA1O94964 1423 aa6.92□□□□□ -1.3
SMARCA2-248ENST00000636221 IFT140Q96RY7 1462 aa6.92□□□□□ -1.3
SMARCA2-248ENST00000636221 RAD54L2Q9Y4B4 1467 aa6.92□□□□□ -1.3
SMARCA2-248ENST00000636221 WDR97A6NE52 1622 aa6.91□□□□□ -1.3
SMARCA2-248ENST00000636221 PBRM1Q86U86 1689 aa6.9□□□□□ -1.3
SMARCA2-248ENST00000636221 EIF4G3O43432 1585 aaKnown RBP6.9□□□□□ -1.31
SMARCA2-248ENST00000636221 ZNF608Q9ULD9 1512 aaPredicted RBP6.89□□□□□ -1.31
SMARCA2-248ENST00000636221 CHD1O14646 1710 aa6.87□□□□□ -1.31
SMARCA2-248ENST00000636221 AQRO60306 1485 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMARCA2-248ENST00000636221 TRIM41Q8WV44 630 aa6.87□□□□□ -1.31
SMARCA2-248ENST00000636221 TDRD9Q8NDG6 1382 aaKnown RBP6.86□□□□□ -1.31
SMARCA2-248ENST00000636221 ABCA5Q8WWZ7 1642 aa6.85□□□□□ -1.31
SMARCA2-248ENST00000636221 ABCA10Q8WWZ4 1543 aa6.85□□□□□ -1.31
SMARCA2-248ENST00000636221 GAPVD1Q14C86 1478 aa6.84□□□□□ -1.31
SMARCA2-248ENST00000636221 CHIC1Q5VXU3 224 aa6.82□□□□□ -1.32
SMARCA2-248ENST00000636221 GRIN2BQ13224 1484 aa6.81□□□□□ -1.32
SMARCA2-248ENST00000636221 FBLN2P98095 1184 aa6.81□□□□□ -1.32
SMARCA2-248ENST00000636221 SNAPC4Q5SXM2 1469 aa6.8□□□□□ -1.32
SMARCA2-248ENST00000636221 KIF27Q86VH2 1401 aa6.79□□□□□ -1.32
SMARCA2-248ENST00000636221 CUL7Q14999 1698 aa6.79□□□□□ -1.32
SMARCA2-248ENST00000636221 RUSC2Q8N2Y8 1516 aa6.79□□□□□ -1.32
SMARCA2-248ENST00000636221 MAGI1Q96QZ7 1491 aaPredicted RBP6.79□□□□□ -1.32
SMARCA2-248ENST00000636221 ERICH3Q5RHP9 1530 aa6.78□□□□□ -1.32
SMARCA2-248ENST00000636221 CHMP7Q8WUX9 453 aaPredicted RBP6.78□□□□□ -1.32
SMARCA2-248ENST00000636221 ADAMTS12P58397 1594 aa6.78□□□□□ -1.32
SMARCA2-248ENST00000636221 FAM9AQ8IZU1 332 aaPredicted RBP6.77□□□□□ -1.33
SMARCA2-248ENST00000636221 SYNJ2O15056 1496 aa6.76□□□□□ -1.33
SMARCA2-248ENST00000636221 OSCARQ8IYS5 282 aa6.75□□□□□ -1.33
SMARCA2-248ENST00000636221 IGF1RP08069 1367 aa6.74□□□□□ -1.33
SMARCA2-248ENST00000636221 FHAD1B1AJZ9 1412 aa6.74□□□□□ -1.33
SMARCA2-248ENST00000636221 CTTNBP2Q8WZ74 1663 aa6.74□□□□□ -1.33
SMARCA2-248ENST00000636221 GRIN2AQ12879 1464 aa6.73□□□□□ -1.33
SMARCA2-248ENST00000636221 CARMIL1Q5VZK9 1371 aa6.72□□□□□ -1.33
SMARCA2-248ENST00000636221 EHMT2Q96KQ7 1210 aa6.72□□□□□ -1.33
SMARCA2-248ENST00000636221 CEP170Q5SW79 1584 aa6.72□□□□□ -1.33
SMARCA2-248ENST00000636221 EEA1Q15075 1411 aa6.71□□□□□ -1.34
SMARCA2-248ENST00000636221 CSRNP3Q8WYN3 585 aa6.71□□□□□ -1.34
SMARCA2-248ENST00000636221 DNAJC5Q9H3Z4 198 aa6.7□□□□□ -1.34
SMARCA2-248ENST00000636221 RAPGEF2Q9Y4G8 1499 aa6.7□□□□□ -1.34
SMARCA2-248ENST00000636221 CLASP1Q7Z460 1538 aa6.69□□□□□ -1.34
SMARCA2-248ENST00000636221 RIMBP3CA6NJZ7 1639 aa6.68□□□□□ -1.34
SMARCA2-248ENST00000636221 RIMBP3BA6NNM3 1639 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms