RNA–Protein interactions for RNA: ENST00000636197.1

ATP1A3-210, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 5

Gene ATP1A3, Length 169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-210ENST00000636197 NISCHQ9Y2I1 1504 aa31.77■■■□□ 2.68
ATP1A3-210ENST00000636197 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
ATP1A3-210ENST00000636197 ABCC9O60706 1549 aa28.58■■■□□ 2.17
ATP1A3-210ENST00000636197 RB1CC1Q8TDY2 1594 aa27.17■■□□□ 1.94
ATP1A3-210ENST00000636197 NACADO15069 1562 aa26.97■■□□□ 1.91
ATP1A3-210ENST00000636197 DNAJC5BQ9UF47 199 aa26.94■■□□□ 1.9
ATP1A3-210ENST00000636197 UNC13AQ9UPW8 1703 aa26.73■■□□□ 1.87
ATP1A3-210ENST00000636197 MYO15BQ96JP2 1530 aa26.62■■□□□ 1.85
ATP1A3-210ENST00000636197 DCAF8L2P0C7V8 631 aa26.58■■□□□ 1.85
ATP1A3-210ENST00000636197 PABPN1Q86U42 306 aaKnown RBP eCLIP26.53■■□□□ 1.84
ATP1A3-210ENST00000636197 BICRAQ9NZM4 1560 aa26.53■■□□□ 1.84
ATP1A3-210ENST00000636197 ZCCHC6Q5VYS8 1495 aaKnown RBP26.35■■□□□ 1.81
ATP1A3-210ENST00000636197 DCAF1Q9Y4B6 1507 aa26.26■■□□□ 1.79
ATP1A3-210ENST00000636197 SHROOM4Q9ULL8 1493 aa26.04■■□□□ 1.76
ATP1A3-210ENST00000636197 SCRIBQ14160 1630 aa26■■□□□ 1.75
ATP1A3-210ENST00000636197 CC2D2AQ9P2K1 1620 aa25.87■■□□□ 1.73
ATP1A3-210ENST00000636197 EIF4G1Q04637 1599 aaKnown RBP25.8■■□□□ 1.72
ATP1A3-210ENST00000636197 CECR2Q9BXF3 1484 aa25.74■■□□□ 1.71
ATP1A3-210ENST00000636197 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
ATP1A3-210ENST00000636197 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.57
ATP1A3-210ENST00000636197 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
ATP1A3-210ENST00000636197 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
ATP1A3-210ENST00000636197 SMARCA2P51531 1590 aa24.72■■□□□ 1.55
ATP1A3-210ENST00000636197 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
ATP1A3-210ENST00000636197 CUX2O14529 1486 aa24.66■■□□□ 1.54
ATP1A3-210ENST00000636197 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
ATP1A3-210ENST00000636197 PEG3Q9GZU2 1588 aa24.62■■□□□ 1.53
ATP1A3-210ENST00000636197 ERCC6Q03468 1493 aa24.59■■□□□ 1.53
ATP1A3-210ENST00000636197 NESP48681 1621 aa24.58■■□□□ 1.53
ATP1A3-210ENST00000636197 BAZ1BQ9UIG0 1483 aaKnown RBP24.53■■□□□ 1.52
ATP1A3-210ENST00000636197 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
ATP1A3-210ENST00000636197 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
ATP1A3-210ENST00000636197 LAMC3Q9Y6N6 1575 aa24.37■■□□□ 1.49
ATP1A3-210ENST00000636197 KIF21AQ7Z4S6 1674 aa24.31■■□□□ 1.48
ATP1A3-210ENST00000636197 WIZO95785 1651 aa24.21■■□□□ 1.47
ATP1A3-210ENST00000636197 PDS5BQ9NTI5 1447 aa24.13■■□□□ 1.45
ATP1A3-210ENST00000636197 CADPSQ9ULU8 1353 aa24.1■■□□□ 1.45
ATP1A3-210ENST00000636197 WDR62O43379 1518 aa24.01■■□□□ 1.43
ATP1A3-210ENST00000636197 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
ATP1A3-210ENST00000636197 RSF1Q96T23 1441 aaPredicted RBP23.93■■□□□ 1.42
ATP1A3-210ENST00000636197 TOP2AP11388 1531 aaKnown RBP23.87■■□□□ 1.41
ATP1A3-210ENST00000636197 CFTRP13569 1480 aa23.87■■□□□ 1.41
ATP1A3-210ENST00000636197 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
ATP1A3-210ENST00000636197 FANCD2Q9BXW9 1451 aa23.85■■□□□ 1.41
ATP1A3-210ENST00000636197 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
ATP1A3-210ENST00000636197 PRDM2Q13029 1718 aa23.71■■□□□ 1.39
ATP1A3-210ENST00000636197 CCDC88BA6NC98 1476 aa23.58■■□□□ 1.37
ATP1A3-210ENST00000636197 TRIM41Q8WV44 630 aa23.49■■□□□ 1.35
ATP1A3-210ENST00000636197 ZNF608Q9ULD9 1512 aaPredicted RBP23.44■■□□□ 1.34
ATP1A3-210ENST00000636197 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
ATP1A3-210ENST00000636197 IFT140Q96RY7 1462 aa23.39■■□□□ 1.34
ATP1A3-210ENST00000636197 OSCARQ8IYS5 282 aa23.39■■□□□ 1.33
ATP1A3-210ENST00000636197 DNMBPQ6XZF7 1577 aa23.34■■□□□ 1.33
ATP1A3-210ENST00000636197 EIF4G3O43432 1585 aaKnown RBP23.32■■□□□ 1.32
ATP1A3-210ENST00000636197 TARBP1Q13395 1621 aaKnown RBP23.3■■□□□ 1.32
ATP1A3-210ENST00000636197 RIMBP3CA6NJZ7 1639 aa23.29■■□□□ 1.32
ATP1A3-210ENST00000636197 RIMBP3BA6NNM3 1639 aa23.29■■□□□ 1.32
ATP1A3-210ENST00000636197 RIMBP3Q9UFD9 1639 aa23.29■■□□□ 1.32
ATP1A3-210ENST00000636197 ABCC8Q09428 1581 aa23.27■■□□□ 1.32
ATP1A3-210ENST00000636197 POLA1P09884 1462 aaPredicted RBP23.19■■□□□ 1.3
ATP1A3-210ENST00000636197 CHD1O14646 1710 aa23.18■■□□□ 1.3
ATP1A3-210ENST00000636197 ARHGEF11O15085 1522 aa23.18■■□□□ 1.3
ATP1A3-210ENST00000636197 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.3
ATP1A3-210ENST00000636197 RAD54L2Q9Y4B4 1467 aa23.09■■□□□ 1.29
ATP1A3-210ENST00000636197 CUX1P39880 1505 aa23.03■■□□□ 1.28
ATP1A3-210ENST00000636197 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
ATP1A3-210ENST00000636197 SOGA1O94964 1423 aa22.99■■□□□ 1.27
ATP1A3-210ENST00000636197 WDR97A6NE52 1622 aa22.98■■□□□ 1.27
ATP1A3-210ENST00000636197 TDRD9Q8NDG6 1382 aaKnown RBP22.98■■□□□ 1.27
ATP1A3-210ENST00000636197 ARAP1Q96P48 1450 aa22.97■■□□□ 1.27
ATP1A3-210ENST00000636197 SNAPC4Q5SXM2 1469 aa22.93■■□□□ 1.26
ATP1A3-210ENST00000636197 CLASP1Q7Z460 1538 aa22.92■■□□□ 1.26
ATP1A3-210ENST00000636197 CYB5RLQ6IPT4 315 aa22.87■■□□□ 1.25
ATP1A3-210ENST00000636197 FBLN2P98095 1184 aa22.86■■□□□ 1.25
ATP1A3-210ENST00000636197 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
ATP1A3-210ENST00000636197 PBRM1Q86U86 1689 aa22.84■■□□□ 1.25
ATP1A3-210ENST00000636197 GRIN2BQ13224 1484 aa22.83■■□□□ 1.25
ATP1A3-210ENST00000636197 ABCA5Q8WWZ7 1642 aa22.8■■□□□ 1.24
ATP1A3-210ENST00000636197 SYNJ1O43426 1573 aa22.79■■□□□ 1.24
ATP1A3-210ENST00000636197 SYNJ2O15056 1496 aa22.78■■□□□ 1.24
ATP1A3-210ENST00000636197 ABCA10Q8WWZ4 1543 aa22.76■■□□□ 1.23
ATP1A3-210ENST00000636197 GAPVD1Q14C86 1478 aa22.74■■□□□ 1.23
ATP1A3-210ENST00000636197 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
ATP1A3-210ENST00000636197 BIVM-ERCC5R4GMW8 1640 aa22.66■■□□□ 1.22
ATP1A3-210ENST00000636197 TOP2BQ02880 1626 aa22.62■■□□□ 1.21
ATP1A3-210ENST00000636197 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
ATP1A3-210ENST00000636197 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
ATP1A3-210ENST00000636197 ERCC6L2Q5T890 1561 aa22.58■■□□□ 1.2
ATP1A3-210ENST00000636197 GRIN2AQ12879 1464 aa22.57■■□□□ 1.2
ATP1A3-210ENST00000636197 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
ATP1A3-210ENST00000636197 TRHP20396 242 aaPredicted RBP22.56■■□□□ 1.2
ATP1A3-210ENST00000636197 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
ATP1A3-210ENST00000636197 NUP160Q12769 1436 aa22.53■■□□□ 1.2
ATP1A3-210ENST00000636197 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
ATP1A3-210ENST00000636197 ERICH3Q5RHP9 1530 aa22.46■■□□□ 1.19
ATP1A3-210ENST00000636197 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
ATP1A3-210ENST00000636197 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
ATP1A3-210ENST00000636197 KIF13AQ9H1H9 1805 aa22.26■■□□□ 1.15
ATP1A3-210ENST00000636197 PRG4Q92954 1404 aaPredicted RBP22.23■■□□□ 1.15
ATP1A3-210ENST00000636197 JPH4Q96JJ6 628 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms