RNA–Protein interactions for RNA: ENST00000635989.1

CLN5-207, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 604 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-207ENST00000635989 NISCHQ9Y2I1 1504 aa47.51■■■■■ 5.2
CLN5-207ENST00000635989 CCDC180Q9P1Z9 1646 aa42.49■■■■■ 4.39
CLN5-207ENST00000635989 ABCC9O60706 1549 aa41.74■■■■■ 4.27
CLN5-207ENST00000635989 RB1CC1Q8TDY2 1594 aa40.08■■■■■ 4.01
CLN5-207ENST00000635989 NACADO15069 1562 aa39.93■■■■□ 3.98
CLN5-207ENST00000635989 DCAF8L2P0C7V8 631 aa39.7■■■■□ 3.95
CLN5-207ENST00000635989 ZCCHC6Q5VYS8 1495 aaKnown RBP39.57■■■■□ 3.93
CLN5-207ENST00000635989 MYO15BQ96JP2 1530 aa39.55■■■■□ 3.92
CLN5-207ENST00000635989 DCAF1Q9Y4B6 1507 aa39.3■■■■□ 3.88
CLN5-207ENST00000635989 UNC13AQ9UPW8 1703 aa39.22■■■■□ 3.87
CLN5-207ENST00000635989 PABPN1Q86U42 306 aaKnown RBP eCLIP38.85■■■■□ 3.81
CLN5-207ENST00000635989 BICRAQ9NZM4 1560 aa38.83■■■■□ 3.81
CLN5-207ENST00000635989 SCRIBQ14160 1630 aa38.76■■■■□ 3.8
CLN5-207ENST00000635989 SHROOM4Q9ULL8 1493 aa38.45■■■■□ 3.75
CLN5-207ENST00000635989 DNAJC5BQ9UF47 199 aa38.37■■■■□ 3.73
CLN5-207ENST00000635989 EIF4G1Q04637 1599 aaKnown RBP37.86■■■■□ 3.65
CLN5-207ENST00000635989 CC2D2AQ9P2K1 1620 aa37.78■■■■□ 3.64
CLN5-207ENST00000635989 CECR2Q9BXF3 1484 aa37.53■■■■□ 3.6
CLN5-207ENST00000635989 SMARCA4P51532 1647 aa37.01■■■■□ 3.52
CLN5-207ENST00000635989 BAZ1AQ9NRL2 1556 aaPredicted RBP36.9■■■■□ 3.5
CLN5-207ENST00000635989 SMARCA2P51531 1590 aa36.79■■■■□ 3.48
CLN5-207ENST00000635989 ATAD2BQ9ULI0 1458 aa36.78■■■■□ 3.48
CLN5-207ENST00000635989 NCAPD3P42695 1498 aa36.76■■■■□ 3.48
CLN5-207ENST00000635989 HMGXB3Q12766 1538 aa36.69■■■■□ 3.46
CLN5-207ENST00000635989 MROH2BQ7Z745 1585 aa36.62■■■■□ 3.45
CLN5-207ENST00000635989 PEG3Q9GZU2 1588 aa36.6■■■■□ 3.45
CLN5-207ENST00000635989 BAZ1BQ9UIG0 1483 aaKnown RBP36.54■■■■□ 3.44
CLN5-207ENST00000635989 WIZO95785 1651 aa36.26■■■■□ 3.4
CLN5-207ENST00000635989 ERCC6Q03468 1493 aa36.05■■■■□ 3.36
CLN5-207ENST00000635989 RSF1Q96T23 1441 aaPredicted RBP36.05■■■■□ 3.36
CLN5-207ENST00000635989 NESP48681 1621 aa36.03■■■■□ 3.36
CLN5-207ENST00000635989 LAMC3Q9Y6N6 1575 aa35.95■■■■□ 3.35
CLN5-207ENST00000635989 TOP2AP11388 1531 aaKnown RBP35.88■■■■□ 3.33
CLN5-207ENST00000635989 CUX2O14529 1486 aa35.73■■■■□ 3.31
CLN5-207ENST00000635989 KIF21AQ7Z4S6 1674 aa35.71■■■■□ 3.31
CLN5-207ENST00000635989 CADPSQ9ULU8 1353 aa35.67■■■■□ 3.3
CLN5-207ENST00000635989 PDS5BQ9NTI5 1447 aa35.65■■■■□ 3.3
CLN5-207ENST00000635989 THOC2Q8NI27 1593 aaKnown RBP35.64■■■■□ 3.3
CLN5-207ENST00000635989 CFTRP13569 1480 aa35.44■■■■□ 3.26
CLN5-207ENST00000635989 CEP164Q9UPV0 1460 aa35.37■■■■□ 3.25
CLN5-207ENST00000635989 MRC2Q9UBG0 1479 aa35.36■■■■□ 3.25
CLN5-207ENST00000635989 CCDC88BA6NC98 1476 aa35.35■■■■□ 3.25
CLN5-207ENST00000635989 FANCD2Q9BXW9 1451 aa35.35■■■■□ 3.25
CLN5-207ENST00000635989 PRDM2Q13029 1718 aa35.35■■■■□ 3.25
CLN5-207ENST00000635989 WDR62O43379 1518 aa35.27■■■■□ 3.24
CLN5-207ENST00000635989 URB2Q14146 1524 aaKnown RBP35.01■■■■□ 3.2
CLN5-207ENST00000635989 SUPT5HO00267 1087 aaKnown RBP34.9■■■■□ 3.18
CLN5-207ENST00000635989 DNAJC5Q9H3Z4 198 aa34.78■■■■□ 3.16
CLN5-207ENST00000635989 TOPBP1Q92547 1522 aa34.76■■■■□ 3.15
CLN5-207ENST00000635989 DNMBPQ6XZF7 1577 aa34.74■■■■□ 3.15
CLN5-207ENST00000635989 ABCC8Q09428 1581 aa34.7■■■■□ 3.14
CLN5-207ENST00000635989 IFT140Q96RY7 1462 aa34.59■■■■□ 3.13
CLN5-207ENST00000635989 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.11
CLN5-207ENST00000635989 POLA1P09884 1462 aaPredicted RBP34.44■■■■□ 3.1
CLN5-207ENST00000635989 EIF4G3O43432 1585 aaKnown RBP34.43■■■■□ 3.1
CLN5-207ENST00000635989 TARBP1Q13395 1621 aaKnown RBP34.41■■■■□ 3.1
CLN5-207ENST00000635989 CUX1P39880 1505 aa34.4■■■■□ 3.1
CLN5-207ENST00000635989 FGD5Q6ZNL6 1462 aa34.33■■■■□ 3.09
CLN5-207ENST00000635989 RAD54L2Q9Y4B4 1467 aa34.27■■■■□ 3.08
CLN5-207ENST00000635989 SOGA1O94964 1423 aa34.22■■■■□ 3.07
CLN5-207ENST00000635989 AQRO60306 1485 aaKnown RBP eCLIP34.18■■■■□ 3.06
CLN5-207ENST00000635989 WDR97A6NE52 1622 aa34.17■■■■□ 3.06
CLN5-207ENST00000635989 BIVM-ERCC5R4GMW8 1640 aa34.08■■■■□ 3.05
CLN5-207ENST00000635989 TDRD9Q8NDG6 1382 aaKnown RBP34.06■■■■□ 3.04
CLN5-207ENST00000635989 TOP2BQ02880 1626 aa34.05■■■■□ 3.04
CLN5-207ENST00000635989 CHD1O14646 1710 aa34.05■■■■□ 3.04
CLN5-207ENST00000635989 OSCARQ8IYS5 282 aa34.05■■■■□ 3.04
CLN5-207ENST00000635989 SYNJ1O43426 1573 aa34.05■■■■□ 3.04
CLN5-207ENST00000635989 WRNQ14191 1432 aaPredicted RBP eCLIP34.04■■■■□ 3.04
CLN5-207ENST00000635989 PBRM1Q86U86 1689 aa33.96■■■■□ 3.03
CLN5-207ENST00000635989 SNAPC4Q5SXM2 1469 aa33.96■■■■□ 3.03
CLN5-207ENST00000635989 ABCA10Q8WWZ4 1543 aa33.96■■■■□ 3.03
CLN5-207ENST00000635989 ABCA5Q8WWZ7 1642 aa33.93■■■■□ 3.02
CLN5-207ENST00000635989 GRIN2BQ13224 1484 aa33.92■■■■□ 3.02
CLN5-207ENST00000635989 MAGI1Q96QZ7 1491 aaPredicted RBP33.88■■■■□ 3.01
CLN5-207ENST00000635989 GAPVD1Q14C86 1478 aa33.88■■■■□ 3.01
CLN5-207ENST00000635989 FBLN2P98095 1184 aa33.81■■■■□ 3
CLN5-207ENST00000635989 SYNJ2O15056 1496 aa33.74■■■□□ 2.99
CLN5-207ENST00000635989 RIMBP3CA6NJZ7 1639 aa33.73■■■□□ 2.99
CLN5-207ENST00000635989 RIMBP3BA6NNM3 1639 aa33.73■■■□□ 2.99
CLN5-207ENST00000635989 RIMBP3Q9UFD9 1639 aa33.73■■■□□ 2.99
CLN5-207ENST00000635989 ARHGEF11O15085 1522 aa33.67■■■□□ 2.98
CLN5-207ENST00000635989 ADAMTS12P58397 1594 aa33.66■■■□□ 2.98
CLN5-207ENST00000635989 CHMP7Q8WUX9 453 aaPredicted RBP33.65■■■□□ 2.98
CLN5-207ENST00000635989 TRIM41Q8WV44 630 aa33.63■■■□□ 2.97
CLN5-207ENST00000635989 CLASP1Q7Z460 1538 aa33.61■■■□□ 2.97
CLN5-207ENST00000635989 ERICH3Q5RHP9 1530 aa33.58■■■□□ 2.97
CLN5-207ENST00000635989 GRIN2AQ12879 1464 aa33.5■■■□□ 2.95
CLN5-207ENST00000635989 FHAD1B1AJZ9 1412 aa33.46■■■□□ 2.95
CLN5-207ENST00000635989 CEP170Q5SW79 1584 aa33.38■■■□□ 2.93
CLN5-207ENST00000635989 ARAP1Q96P48 1450 aa33.37■■■□□ 2.93
CLN5-207ENST00000635989 KIF27Q86VH2 1401 aa33.36■■■□□ 2.93
CLN5-207ENST00000635989 NUP160Q12769 1436 aa33.34■■■□□ 2.93
CLN5-207ENST00000635989 CUL7Q14999 1698 aa33.29■■■□□ 2.92
CLN5-207ENST00000635989 CYB5RLQ6IPT4 315 aa33.22■■■□□ 2.91
CLN5-207ENST00000635989 RUSC2Q8N2Y8 1516 aa33.18■■■□□ 2.9
CLN5-207ENST00000635989 SHROOM2Q13796 1616 aa33.17■■■□□ 2.9
CLN5-207ENST00000635989 IGF1RP08069 1367 aa33.14■■■□□ 2.9
CLN5-207ENST00000635989 ERCC6L2Q5T890 1561 aa33.1■■■□□ 2.89
CLN5-207ENST00000635989 CARMIL1Q5VZK9 1371 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms