RNA–Protein interactions for RNA: ENST00000635907.1

AMT-226, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 876 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-226ENST00000635907 NISCHQ9Y2I1 1504 aa29.36■■■□□ 2.29
AMT-226ENST00000635907 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
AMT-226ENST00000635907 ABCC9O60706 1549 aa25.63■■□□□ 1.69
AMT-226ENST00000635907 RB1CC1Q8TDY2 1594 aa24.63■■□□□ 1.53
AMT-226ENST00000635907 NACADO15069 1562 aa24.61■■□□□ 1.53
AMT-226ENST00000635907 MYO15BQ96JP2 1530 aa24.51■■□□□ 1.51
AMT-226ENST00000635907 DCAF8L2P0C7V8 631 aa24.51■■□□□ 1.51
AMT-226ENST00000635907 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.51
AMT-226ENST00000635907 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
AMT-226ENST00000635907 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.423e-6■■■■□ 23.3
AMT-226ENST00000635907 UNC13AQ9UPW8 1703 aa23.9■■□□□ 1.42
AMT-226ENST00000635907 BICRAQ9NZM4 1560 aa23.87■■□□□ 1.41
AMT-226ENST00000635907 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
AMT-226ENST00000635907 SHROOM4Q9ULL8 1493 aa23.74■■□□□ 1.39
AMT-226ENST00000635907 DNAJC5BQ9UF47 199 aa23.63■■□□□ 1.37
AMT-226ENST00000635907 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
AMT-226ENST00000635907 CC2D2AQ9P2K1 1620 aa23.16■■□□□ 1.3
AMT-226ENST00000635907 CECR2Q9BXF3 1484 aa23.08■■□□□ 1.29
AMT-226ENST00000635907 BAZ1AQ9NRL2 1556 aaPredicted RBP22.77■■□□□ 1.24
AMT-226ENST00000635907 NCAPD3P42695 1498 aa22.76■■□□□ 1.23
AMT-226ENST00000635907 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
AMT-226ENST00000635907 ATAD2BQ9ULI0 1458 aa22.72■■□□□ 1.23
AMT-226ENST00000635907 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
AMT-226ENST00000635907 MROH2BQ7Z745 1585 aa22.6■■□□□ 1.21
AMT-226ENST00000635907 PEG3Q9GZU2 1588 aa22.6■■□□□ 1.21
AMT-226ENST00000635907 HMGXB3Q12766 1538 aa22.6■■□□□ 1.21
AMT-226ENST00000635907 BAZ1BQ9UIG0 1483 aaKnown RBP22.51■■□□□ 1.19
AMT-226ENST00000635907 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
AMT-226ENST00000635907 WIZO95785 1651 aa22.28■■□□□ 1.16
AMT-226ENST00000635907 NESP48681 1621 aa22.14■■□□□ 1.14
AMT-226ENST00000635907 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
AMT-226ENST00000635907 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
AMT-226ENST00000635907 ERCC6Q03468 1493 aa22.11■■□□□ 1.13
AMT-226ENST00000635907 CADPSQ9ULU8 1353 aa22.08■■□□□ 1.12
AMT-226ENST00000635907 PDS5BQ9NTI5 1447 aa22.01■■□□□ 1.11
AMT-226ENST00000635907 CUX2O14529 1486 aa21.96■■□□□ 1.11
AMT-226ENST00000635907 CFTRP13569 1480 aa21.93■■□□□ 1.1
AMT-226ENST00000635907 CCDC88BA6NC98 1476 aa21.86■■□□□ 1.09
AMT-226ENST00000635907 THOC2Q8NI27 1593 aaKnown RBP21.83■■□□□ 1.09
AMT-226ENST00000635907 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
AMT-226ENST00000635907 FANCD2Q9BXW9 1451 aa21.79■■□□□ 1.08
AMT-226ENST00000635907 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.07
AMT-226ENST00000635907 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.07
AMT-226ENST00000635907 WDR62O43379 1518 aa21.69■■□□□ 1.06
AMT-226ENST00000635907 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.05
AMT-226ENST00000635907 URB2Q14146 1524 aaKnown RBP21.56■■□□□ 1.04
AMT-226ENST00000635907 PRDM2Q13029 1718 aa21.55■■□□□ 1.04
AMT-226ENST00000635907 ABCC8Q09428 1581 aa21.45■■□□□ 1.02
AMT-226ENST00000635907 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
AMT-226ENST00000635907 DNAJC5Q9H3Z4 198 aa21.4■■□□□ 1.02
AMT-226ENST00000635907 DNMBPQ6XZF7 1577 aa21.37■■□□□ 1.01
AMT-226ENST00000635907 IFT140Q96RY7 1462 aa21.33■■□□□ 1.01
AMT-226ENST00000635907 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
AMT-226ENST00000635907 CUX1P39880 1505 aa21.21■□□□□ 0.99
AMT-226ENST00000635907 ZNF608Q9ULD9 1512 aaPredicted RBP21.2■□□□□ 0.98
AMT-226ENST00000635907 TARBP1Q13395 1621 aaKnown RBP21.16■□□□□ 0.98
AMT-226ENST00000635907 FGD5Q6ZNL6 1462 aa21.16■□□□□ 0.98
AMT-226ENST00000635907 SOGA1O94964 1423 aa21.16■□□□□ 0.98
AMT-226ENST00000635907 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
AMT-226ENST00000635907 EIF4G3O43432 1585 aaKnown RBP21.09■□□□□ 0.97
AMT-226ENST00000635907 AQRO60306 1485 aaKnown RBP eCLIP21.08■□□□□ 0.978e-7■■■■□ 22.8
AMT-226ENST00000635907 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
AMT-226ENST00000635907 WDR97A6NE52 1622 aa21.04■□□□□ 0.96
AMT-226ENST00000635907 OSCARQ8IYS5 282 aa21.04■□□□□ 0.96
AMT-226ENST00000635907 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
AMT-226ENST00000635907 TOP2BQ02880 1626 aa21■□□□□ 0.95
AMT-226ENST00000635907 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
AMT-226ENST00000635907 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
AMT-226ENST00000635907 SYNJ1O43426 1573 aa20.96■□□□□ 0.95
AMT-226ENST00000635907 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
AMT-226ENST00000635907 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
AMT-226ENST00000635907 MAGI1Q96QZ7 1491 aaPredicted RBP20.89■□□□□ 0.94
AMT-226ENST00000635907 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
AMT-226ENST00000635907 ABCA5Q8WWZ7 1642 aa20.86■□□□□ 0.93
AMT-226ENST00000635907 FBLN2P98095 1184 aa20.83■□□□□ 0.93
AMT-226ENST00000635907 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
AMT-226ENST00000635907 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
AMT-226ENST00000635907 CHD1O14646 1710 aa20.75■□□□□ 0.91
AMT-226ENST00000635907 PBRM1Q86U86 1689 aa20.74■□□□□ 0.91
AMT-226ENST00000635907 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
AMT-226ENST00000635907 FHAD1B1AJZ9 1412 aa20.69■□□□□ 0.9
AMT-226ENST00000635907 ADAMTS12P58397 1594 aa20.67■□□□□ 0.9
AMT-226ENST00000635907 ARHGEF11O15085 1522 aa20.66■□□□□ 0.9
AMT-226ENST00000635907 CLASP1Q7Z460 1538 aa20.65■□□□□ 0.9
AMT-226ENST00000635907 GRIN2AQ12879 1464 aa20.65■□□□□ 0.9
AMT-226ENST00000635907 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
AMT-226ENST00000635907 RIMBP3CA6NJZ7 1639 aa20.61■□□□□ 0.89
AMT-226ENST00000635907 RIMBP3BA6NNM3 1639 aa20.61■□□□□ 0.89
AMT-226ENST00000635907 RIMBP3Q9UFD9 1639 aa20.61■□□□□ 0.89
AMT-226ENST00000635907 NUP160Q12769 1436 aa20.6■□□□□ 0.89
AMT-226ENST00000635907 IGF1RP08069 1367 aa20.59■□□□□ 0.89
AMT-226ENST00000635907 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
AMT-226ENST00000635907 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
AMT-226ENST00000635907 ARAP1Q96P48 1450 aa20.5■□□□□ 0.87
AMT-226ENST00000635907 CYB5RLQ6IPT4 315 aa20.47■□□□□ 0.87
AMT-226ENST00000635907 CUL7Q14999 1698 aa20.46■□□□□ 0.87
AMT-226ENST00000635907 CARMIL1Q5VZK9 1371 aa20.45■□□□□ 0.86
AMT-226ENST00000635907 SHROOM2Q13796 1616 aa20.38■□□□□ 0.85
AMT-226ENST00000635907 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
AMT-226ENST00000635907 KIAA0586Q9BVV6 1533 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms