RNA–Protein interactions for RNA: ENST00000635864.1

KCNQ2-220, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5

Gene KCNQ2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-220ENST00000635864 NISCHQ9Y2I1 1504 aa14.8□□□□□ -0.04
KCNQ2-220ENST00000635864 ABCC9O60706 1549 aa13.38□□□□□ -0.27
KCNQ2-220ENST00000635864 CCDC180Q9P1Z9 1646 aa13.31□□□□□ -0.28
KCNQ2-220ENST00000635864 UNC13AQ9UPW8 1703 aa12.7□□□□□ -0.38
KCNQ2-220ENST00000635864 DNAJC5BQ9UF47 199 aa12.57□□□□□ -0.4
KCNQ2-220ENST00000635864 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
KCNQ2-220ENST00000635864 BICRAQ9NZM4 1560 aa12.47□□□□□ -0.41
KCNQ2-220ENST00000635864 NACADO15069 1562 aa12.43□□□□□ -0.42
KCNQ2-220ENST00000635864 PABPN1Q86U42 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
KCNQ2-220ENST00000635864 ZCCHC6Q5VYS8 1495 aaKnown RBP12.33□□□□□ -0.44
KCNQ2-220ENST00000635864 DCAF8L2P0C7V8 631 aa12.32□□□□□ -0.44
KCNQ2-220ENST00000635864 SCRIBQ14160 1630 aa12.31□□□□□ -0.44
KCNQ2-220ENST00000635864 MYO15BQ96JP2 1530 aa12.17□□□□□ -0.46
KCNQ2-220ENST00000635864 CC2D2AQ9P2K1 1620 aa12.1□□□□□ -0.47
KCNQ2-220ENST00000635864 DCAF1Q9Y4B6 1507 aa12.09□□□□□ -0.47
KCNQ2-220ENST00000635864 EIF4G1Q04637 1599 aaKnown RBP12.03□□□□□ -0.48
KCNQ2-220ENST00000635864 CECR2Q9BXF3 1484 aa11.93□□□□□ -0.5
KCNQ2-220ENST00000635864 SHROOM4Q9ULL8 1493 aa11.87□□□□□ -0.51
KCNQ2-220ENST00000635864 SMARCA4P51532 1647 aa11.64□□□□□ -0.55
KCNQ2-220ENST00000635864 NESP48681 1621 aa11.59□□□□□ -0.55
KCNQ2-220ENST00000635864 MROH2BQ7Z745 1585 aa11.54□□□□□ -0.56
KCNQ2-220ENST00000635864 ATAD2BQ9ULI0 1458 aa11.53□□□□□ -0.56
KCNQ2-220ENST00000635864 KIF21AQ7Z4S6 1674 aa11.52□□□□□ -0.57
KCNQ2-220ENST00000635864 WIZO95785 1651 aa11.49□□□□□ -0.57
KCNQ2-220ENST00000635864 THOC2Q8NI27 1593 aaKnown RBP11.48□□□□□ -0.57
KCNQ2-220ENST00000635864 HMGXB3Q12766 1538 aa11.47□□□□□ -0.57
KCNQ2-220ENST00000635864 NCAPD3P42695 1498 aa11.46□□□□□ -0.57
KCNQ2-220ENST00000635864 SMARCA2P51531 1590 aa11.43□□□□□ -0.58
KCNQ2-220ENST00000635864 PEG3Q9GZU2 1588 aa11.42□□□□□ -0.58
KCNQ2-220ENST00000635864 BAZ1AQ9NRL2 1556 aaPredicted RBP11.42□□□□□ -0.58
KCNQ2-220ENST00000635864 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
KCNQ2-220ENST00000635864 ERCC6Q03468 1493 aa11.37□□□□□ -0.59
KCNQ2-220ENST00000635864 CUX2O14529 1486 aa11.3□□□□□ -0.6
KCNQ2-220ENST00000635864 LAMC3Q9Y6N6 1575 aa11.27□□□□□ -0.61
KCNQ2-220ENST00000635864 DNAJC5Q9H3Z4 198 aa11.24□□□□□ -0.61
KCNQ2-220ENST00000635864 PRDM2Q13029 1718 aa11.18□□□□□ -0.62
KCNQ2-220ENST00000635864 WDR62O43379 1518 aa11.17□□□□□ -0.62
KCNQ2-220ENST00000635864 TOP2AP11388 1531 aaKnown RBP11.17□□□□□ -0.62
KCNQ2-220ENST00000635864 RSF1Q96T23 1441 aaPredicted RBP11.17□□□□□ -0.62
KCNQ2-220ENST00000635864 MRC2Q9UBG0 1479 aa11.13□□□□□ -0.63
KCNQ2-220ENST00000635864 URB2Q14146 1524 aaKnown RBP11.13□□□□□ -0.63
KCNQ2-220ENST00000635864 CADPSQ9ULU8 1353 aa11.09□□□□□ -0.63
KCNQ2-220ENST00000635864 FANCD2Q9BXW9 1451 aa11.08□□□□□ -0.64
KCNQ2-220ENST00000635864 CEP164Q9UPV0 1460 aa11.07□□□□□ -0.64
KCNQ2-220ENST00000635864 CFTRP13569 1480 aa11.04□□□□□ -0.64
KCNQ2-220ENST00000635864 PDS5BQ9NTI5 1447 aa11.03□□□□□ -0.64
KCNQ2-220ENST00000635864 CCDC88BA6NC98 1476 aa11.02□□□□□ -0.65
KCNQ2-220ENST00000635864 ZNF608Q9ULD9 1512 aaPredicted RBP11.02□□□□□ -0.65
KCNQ2-220ENST00000635864 EIF4G3O43432 1585 aaKnown RBP10.98□□□□□ -0.65
KCNQ2-220ENST00000635864 CHD1O14646 1710 aa10.98□□□□□ -0.65
KCNQ2-220ENST00000635864 TOPBP1Q92547 1522 aa10.93□□□□□ -0.66
KCNQ2-220ENST00000635864 RIMBP3CA6NJZ7 1639 aa10.92□□□□□ -0.66
KCNQ2-220ENST00000635864 RIMBP3BA6NNM3 1639 aa10.92□□□□□ -0.66
KCNQ2-220ENST00000635864 TARBP1Q13395 1621 aaKnown RBP10.92□□□□□ -0.66
KCNQ2-220ENST00000635864 RIMBP3Q9UFD9 1639 aa10.92□□□□□ -0.66
KCNQ2-220ENST00000635864 WDR97A6NE52 1622 aa10.88□□□□□ -0.67
KCNQ2-220ENST00000635864 DNMBPQ6XZF7 1577 aa10.88□□□□□ -0.67
KCNQ2-220ENST00000635864 TRIM41Q8WV44 630 aa10.88□□□□□ -0.67
KCNQ2-220ENST00000635864 RAD54L2Q9Y4B4 1467 aa10.85□□□□□ -0.67
KCNQ2-220ENST00000635864 CUX1P39880 1505 aa10.84□□□□□ -0.67
KCNQ2-220ENST00000635864 POLA1P09884 1462 aaPredicted RBP10.82□□□□□ -0.68
KCNQ2-220ENST00000635864 AQRO60306 1485 aaKnown RBP eCLIP10.81□□□□□ -0.68
KCNQ2-220ENST00000635864 PBRM1Q86U86 1689 aa10.8□□□□□ -0.68
KCNQ2-220ENST00000635864 IFT140Q96RY7 1462 aa10.79□□□□□ -0.68
KCNQ2-220ENST00000635864 ARHGEF11O15085 1522 aa10.79□□□□□ -0.68
KCNQ2-220ENST00000635864 FGD5Q6ZNL6 1462 aa10.78□□□□□ -0.68
KCNQ2-220ENST00000635864 SNAPC4Q5SXM2 1469 aa10.74□□□□□ -0.69
KCNQ2-220ENST00000635864 ARAP1Q96P48 1450 aa10.74□□□□□ -0.69
KCNQ2-220ENST00000635864 SYNJ1O43426 1573 aa10.73□□□□□ -0.69
KCNQ2-220ENST00000635864 ABCC8Q09428 1581 aa10.73□□□□□ -0.69
KCNQ2-220ENST00000635864 ERCC6L2Q5T890 1561 aa10.73□□□□□ -0.69
KCNQ2-220ENST00000635864 CLASP1Q7Z460 1538 aa10.72□□□□□ -0.69
KCNQ2-220ENST00000635864 ABCA5Q8WWZ7 1642 aa10.71□□□□□ -0.69
KCNQ2-220ENST00000635864 TDRD9Q8NDG6 1382 aaKnown RBP10.7□□□□□ -0.7
KCNQ2-220ENST00000635864 BIVM-ERCC5R4GMW8 1640 aa10.66□□□□□ -0.7
KCNQ2-220ENST00000635864 OSCARQ8IYS5 282 aa10.63□□□□□ -0.71
KCNQ2-220ENST00000635864 ADAMTS12P58397 1594 aa10.63□□□□□ -0.71
KCNQ2-220ENST00000635864 CEP170Q5SW79 1584 aa10.63□□□□□ -0.71
KCNQ2-220ENST00000635864 SOGA1O94964 1423 aa10.62□□□□□ -0.71
KCNQ2-220ENST00000635864 SUPT5HO00267 1087 aaKnown RBP10.62□□□□□ -0.71
KCNQ2-220ENST00000635864 TOP2BQ02880 1626 aa10.58□□□□□ -0.72
KCNQ2-220ENST00000635864 FBLN2P98095 1184 aa10.56□□□□□ -0.72
KCNQ2-220ENST00000635864 ABCA10Q8WWZ4 1543 aa10.55□□□□□ -0.72
KCNQ2-220ENST00000635864 GRIN2BQ13224 1484 aa10.55□□□□□ -0.72
KCNQ2-220ENST00000635864 GAPVD1Q14C86 1478 aa10.54□□□□□ -0.72
KCNQ2-220ENST00000635864 MAGI1Q96QZ7 1491 aaPredicted RBP10.54□□□□□ -0.72
KCNQ2-220ENST00000635864 SYNJ2O15056 1496 aa10.53□□□□□ -0.72
KCNQ2-220ENST00000635864 SHROOM2Q13796 1616 aa10.52□□□□□ -0.73
KCNQ2-220ENST00000635864 CYB5RLQ6IPT4 315 aa10.52□□□□□ -0.73
KCNQ2-220ENST00000635864 RUSC2Q8N2Y8 1516 aa10.5□□□□□ -0.73
KCNQ2-220ENST00000635864 KIF13AQ9H1H9 1805 aa10.5□□□□□ -0.73
KCNQ2-220ENST00000635864 GRIN2AQ12879 1464 aa10.49□□□□□ -0.73
KCNQ2-220ENST00000635864 WRNQ14191 1432 aaPredicted RBP eCLIP10.47□□□□□ -0.73
KCNQ2-220ENST00000635864 NUP160Q12769 1436 aa10.44□□□□□ -0.74
KCNQ2-220ENST00000635864 ADCY10Q96PN6 1610 aa10.4□□□□□ -0.74
KCNQ2-220ENST00000635864 ERICH3Q5RHP9 1530 aa10.39□□□□□ -0.75
KCNQ2-220ENST00000635864 CHMP7Q8WUX9 453 aaPredicted RBP10.39□□□□□ -0.75
KCNQ2-220ENST00000635864 FHAD1B1AJZ9 1412 aa10.35□□□□□ -0.75
KCNQ2-220ENST00000635864 TRHP20396 242 aaPredicted RBP10.35□□□□□ -0.75
KCNQ2-220ENST00000635864 TSPOAP1O95153 1857 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms