RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 NISCHQ9Y2I1 1504 aa41.18■■■■■ 4.18
LIN28B-202ENST00000635857 CCDC180Q9P1Z9 1646 aa36.72■■■■□ 3.47
LIN28B-202ENST00000635857 ABCC9O60706 1549 aa35.88■■■■□ 3.33
LIN28B-202ENST00000635857 RB1CC1Q8TDY2 1594 aa34.57■■■■□ 3.13
LIN28B-202ENST00000635857 DCAF8L2P0C7V8 631 aa34.5■■■■□ 3.11
LIN28B-202ENST00000635857 NACADO15069 1562 aa34.49■■■■□ 3.11
LIN28B-202ENST00000635857 ZCCHC6Q5VYS8 1495 aaKnown RBP34.31■■■■□ 3.08
LIN28B-202ENST00000635857 MYO15BQ96JP2 1530 aa34.25■■■■□ 3.07
LIN28B-202ENST00000635857 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
LIN28B-202ENST00000635857 UNC13AQ9UPW8 1703 aa33.74■■■□□ 2.99
LIN28B-202ENST00000635857 SCRIBQ14160 1630 aa33.49■■■□□ 2.95
LIN28B-202ENST00000635857 PABPN1Q86U42 306 aaKnown RBP eCLIP33.48■■■□□ 2.95
LIN28B-202ENST00000635857 BICRAQ9NZM4 1560 aa33.39■■■□□ 2.94
LIN28B-202ENST00000635857 SHROOM4Q9ULL8 1493 aa33.17■■■□□ 2.9
LIN28B-202ENST00000635857 DNAJC5BQ9UF47 199 aa32.77■■■□□ 2.84
LIN28B-202ENST00000635857 EIF4G1Q04637 1599 aaKnown RBP32.59■■■□□ 2.81
LIN28B-202ENST00000635857 CC2D2AQ9P2K1 1620 aa32.46■■■□□ 2.79
LIN28B-202ENST00000635857 CECR2Q9BXF3 1484 aa32.25■■■□□ 2.75
LIN28B-202ENST00000635857 SMARCA4P51532 1647 aa32■■■□□ 2.71
LIN28B-202ENST00000635857 BAZ1AQ9NRL2 1556 aaPredicted RBP31.99■■■□□ 2.71
LIN28B-202ENST00000635857 SMARCA2P51531 1590 aa31.83■■■□□ 2.69
LIN28B-202ENST00000635857 ATAD2BQ9ULI0 1458 aa31.78■■■□□ 2.68
LIN28B-202ENST00000635857 NCAPD3P42695 1498 aa31.76■■■□□ 2.67
LIN28B-202ENST00000635857 MROH2BQ7Z745 1585 aa31.71■■■□□ 2.67
LIN28B-202ENST00000635857 HMGXB3Q12766 1538 aa31.67■■■□□ 2.66
LIN28B-202ENST00000635857 PEG3Q9GZU2 1588 aa31.65■■■□□ 2.66
LIN28B-202ENST00000635857 BAZ1BQ9UIG0 1483 aaKnown RBP31.6■■■□□ 2.65
LIN28B-202ENST00000635857 WIZO95785 1651 aa31.41■■■□□ 2.62
LIN28B-202ENST00000635857 RSF1Q96T23 1441 aaPredicted RBP31.33■■■□□ 2.61
LIN28B-202ENST00000635857 TOP2AP11388 1531 aaKnown RBP31.11■■■□□ 2.57
LIN28B-202ENST00000635857 ERCC6Q03468 1493 aa31.02■■■□□ 2.56
LIN28B-202ENST00000635857 LAMC3Q9Y6N6 1575 aa31.01■■■□□ 2.56
LIN28B-202ENST00000635857 NESP48681 1621 aa30.99■■■□□ 2.55
LIN28B-202ENST00000635857 CADPSQ9ULU8 1353 aa30.85■■■□□ 2.53
LIN28B-202ENST00000635857 PDS5BQ9NTI5 1447 aa30.81■■■□□ 2.52
LIN28B-202ENST00000635857 KIF21AQ7Z4S6 1674 aa30.71■■■□□ 2.51
LIN28B-202ENST00000635857 CCDC88BA6NC98 1476 aa30.68■■■□□ 2.5
LIN28B-202ENST00000635857 CFTRP13569 1480 aa30.66■■■□□ 2.5
LIN28B-202ENST00000635857 CUX2O14529 1486 aa30.65■■■□□ 2.5
LIN28B-202ENST00000635857 SUPT5HO00267 1087 aaKnown RBP30.61■■■□□ 2.49
LIN28B-202ENST00000635857 THOC2Q8NI27 1593 aaKnown RBP30.58■■■□□ 2.49
LIN28B-202ENST00000635857 PRDM2Q13029 1718 aa30.56■■■□□ 2.48
LIN28B-202ENST00000635857 CEP164Q9UPV0 1460 aa30.54■■■□□ 2.48
LIN28B-202ENST00000635857 FANCD2Q9BXW9 1451 aa30.53■■■□□ 2.48
LIN28B-202ENST00000635857 MRC2Q9UBG0 1479 aa30.48■■■□□ 2.47
LIN28B-202ENST00000635857 WDR62O43379 1518 aa30.35■■■□□ 2.45
LIN28B-202ENST00000635857 URB2Q14146 1524 aaKnown RBP30.18■■■□□ 2.42
LIN28B-202ENST00000635857 ABCC8Q09428 1581 aa30.1■■■□□ 2.41
LIN28B-202ENST00000635857 DNMBPQ6XZF7 1577 aa30.03■■■□□ 2.4
LIN28B-202ENST00000635857 TOPBP1Q92547 1522 aa30.02■■■□□ 2.4
LIN28B-202ENST00000635857 IFT140Q96RY7 1462 aa29.88■■■□□ 2.37
LIN28B-202ENST00000635857 CUX1P39880 1505 aa29.76■■■□□ 2.36
LIN28B-202ENST00000635857 POLA1P09884 1462 aaPredicted RBP29.76■■■□□ 2.35
LIN28B-202ENST00000635857 FGD5Q6ZNL6 1462 aa29.71■■■□□ 2.35
LIN28B-202ENST00000635857 TARBP1Q13395 1621 aaKnown RBP29.68■■■□□ 2.34
LIN28B-202ENST00000635857 ZNF608Q9ULD9 1512 aaPredicted RBP29.66■■■□□ 2.34
LIN28B-202ENST00000635857 SOGA1O94964 1423 aa29.65■■■□□ 2.34
LIN28B-202ENST00000635857 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.33
LIN28B-202ENST00000635857 DNAJC5Q9H3Z4 198 aa29.63■■■□□ 2.33
LIN28B-202ENST00000635857 WRNQ14191 1432 aaPredicted RBP eCLIP29.62■■■□□ 2.33
LIN28B-202ENST00000635857 RAD54L2Q9Y4B4 1467 aa29.61■■■□□ 2.33
LIN28B-202ENST00000635857 BIVM-ERCC5R4GMW8 1640 aa29.56■■■□□ 2.32
LIN28B-202ENST00000635857 TOP2BQ02880 1626 aa29.56■■■□□ 2.32
LIN28B-202ENST00000635857 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
LIN28B-202ENST00000635857 AQRO60306 1485 aaKnown RBP eCLIP29.52■■■□□ 2.32
LIN28B-202ENST00000635857 SYNJ1O43426 1573 aa29.52■■■□□ 2.32
LIN28B-202ENST00000635857 TDRD9Q8NDG6 1382 aaKnown RBP29.46■■■□□ 2.31
LIN28B-202ENST00000635857 ABCA10Q8WWZ4 1543 aa29.41■■■□□ 2.3
LIN28B-202ENST00000635857 OSCARQ8IYS5 282 aa29.36■■■□□ 2.29
LIN28B-202ENST00000635857 GRIN2BQ13224 1484 aa29.34■■■□□ 2.29
LIN28B-202ENST00000635857 GAPVD1Q14C86 1478 aa29.33■■■□□ 2.29
LIN28B-202ENST00000635857 PBRM1Q86U86 1689 aa29.33■■■□□ 2.29
LIN28B-202ENST00000635857 ABCA5Q8WWZ7 1642 aa29.31■■■□□ 2.28
LIN28B-202ENST00000635857 SNAPC4Q5SXM2 1469 aa29.29■■■□□ 2.28
LIN28B-202ENST00000635857 CHD1O14646 1710 aa29.28■■■□□ 2.28
LIN28B-202ENST00000635857 MAGI1Q96QZ7 1491 aaPredicted RBP29.28■■■□□ 2.28
LIN28B-202ENST00000635857 FBLN2P98095 1184 aa29.26■■■□□ 2.27
LIN28B-202ENST00000635857 CHMP7Q8WUX9 453 aaPredicted RBP29.17■■■□□ 2.26
LIN28B-202ENST00000635857 SYNJ2O15056 1496 aa29.15■■■□□ 2.26
LIN28B-202ENST00000635857 ERICH3Q5RHP9 1530 aa29.1■■■□□ 2.25
LIN28B-202ENST00000635857 ADAMTS12P58397 1594 aa29.05■■■□□ 2.24
LIN28B-202ENST00000635857 KIF27Q86VH2 1401 aa29.03■■■□□ 2.24
LIN28B-202ENST00000635857 FHAD1B1AJZ9 1412 aa29■■■□□ 2.23
LIN28B-202ENST00000635857 GRIN2AQ12879 1464 aa28.95■■■□□ 2.22
LIN28B-202ENST00000635857 TRIM41Q8WV44 630 aa28.94■■■□□ 2.22
LIN28B-202ENST00000635857 CLASP1Q7Z460 1538 aa28.89■■■□□ 2.22
LIN28B-202ENST00000635857 RIMBP3CA6NJZ7 1639 aa28.89■■■□□ 2.22
LIN28B-202ENST00000635857 RIMBP3BA6NNM3 1639 aa28.89■■■□□ 2.22
LIN28B-202ENST00000635857 RIMBP3Q9UFD9 1639 aa28.89■■■□□ 2.22
LIN28B-202ENST00000635857 CUL7Q14999 1698 aa28.88■■■□□ 2.21
LIN28B-202ENST00000635857 ARHGEF11O15085 1522 aa28.88■■■□□ 2.21
LIN28B-202ENST00000635857 IGF1RP08069 1367 aa28.8■■■□□ 2.2
LIN28B-202ENST00000635857 CEP170Q5SW79 1584 aa28.79■■■□□ 2.2
LIN28B-202ENST00000635857 NUP160Q12769 1436 aa28.78■■■□□ 2.2
LIN28B-202ENST00000635857 CARMIL1Q5VZK9 1371 aa28.71■■■□□ 2.19
LIN28B-202ENST00000635857 RUSC2Q8N2Y8 1516 aa28.63■■■□□ 2.17
LIN28B-202ENST00000635857 ARAP1Q96P48 1450 aa28.61■■■□□ 2.17
LIN28B-202ENST00000635857 CYB5RLQ6IPT4 315 aa28.6■■■□□ 2.17
LIN28B-202ENST00000635857 SHROOM2Q13796 1616 aa28.58■■■□□ 2.17
LIN28B-202ENST00000635857 RAPGEF2Q9Y4G8 1499 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms