RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 NISCHQ9Y2I1 1504 aa22.83■■□□□ 1.24
CACNA1A-216ENST00000635742 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
CACNA1A-216ENST00000635742 ZCCHC6Q5VYS8 1495 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-216ENST00000635742 ABCC9O60706 1549 aa18.87■□□□□ 0.61
CACNA1A-216ENST00000635742 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
CACNA1A-216ENST00000635742 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
CACNA1A-216ENST00000635742 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
CACNA1A-216ENST00000635742 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
CACNA1A-216ENST00000635742 NACADO15069 1562 aa18.54■□□□□ 0.56
CACNA1A-216ENST00000635742 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
CACNA1A-216ENST00000635742 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
CACNA1A-216ENST00000635742 UNC13AQ9UPW8 1703 aa18.1■□□□□ 0.49
CACNA1A-216ENST00000635742 BICRAQ9NZM4 1560 aa17.89■□□□□ 0.45
CACNA1A-216ENST00000635742 SUPT5HO00267 1087 aaKnown RBP17.85■□□□□ 0.45
CACNA1A-216ENST00000635742 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
CACNA1A-216ENST00000635742 PABPN1Q86U42 306 aaKnown RBP eCLIP17.76■□□□□ 0.43
CACNA1A-216ENST00000635742 RSF1Q96T23 1441 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-216ENST00000635742 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
CACNA1A-216ENST00000635742 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-216ENST00000635742 SMARCA4P51532 1647 aa17.58■□□□□ 0.4
CACNA1A-216ENST00000635742 WIZO95785 1651 aa17.53■□□□□ 0.4
CACNA1A-216ENST00000635742 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
CACNA1A-216ENST00000635742 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-216ENST00000635742 TOP2AP11388 1531 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-216ENST00000635742 ATAD2BQ9ULI0 1458 aa17.27■□□□□ 0.35
CACNA1A-216ENST00000635742 SMARCA2P51531 1590 aa17.24■□□□□ 0.35
CACNA1A-216ENST00000635742 BAZ1BQ9UIG0 1483 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-216ENST00000635742 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
CACNA1A-216ENST00000635742 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
CACNA1A-216ENST00000635742 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
CACNA1A-216ENST00000635742 CC2D2AQ9P2K1 1620 aa17.08■□□□□ 0.33
CACNA1A-216ENST00000635742 CHIC1Q5VXU3 224 aa17.08■□□□□ 0.32
CACNA1A-216ENST00000635742 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
CACNA1A-216ENST00000635742 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
CACNA1A-216ENST00000635742 CFTRP13569 1480 aa16.72■□□□□ 0.27
CACNA1A-216ENST00000635742 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
CACNA1A-216ENST00000635742 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
CACNA1A-216ENST00000635742 CADPSQ9ULU8 1353 aa16.65■□□□□ 0.26
CACNA1A-216ENST00000635742 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
CACNA1A-216ENST00000635742 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
CACNA1A-216ENST00000635742 NESP48681 1621 aa16.58■□□□□ 0.24
CACNA1A-216ENST00000635742 BIVM-ERCC5R4GMW8 1640 aa16.55■□□□□ 0.24
CACNA1A-216ENST00000635742 TOP2BQ02880 1626 aa16.54■□□□□ 0.24
CACNA1A-216ENST00000635742 LAMC3Q9Y6N6 1575 aa16.54■□□□□ 0.24
CACNA1A-216ENST00000635742 CUX1P39880 1505 aa16.51■□□□□ 0.23
CACNA1A-216ENST00000635742 FANCD2Q9BXW9 1451 aa16.49■□□□□ 0.23
CACNA1A-216ENST00000635742 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-216ENST00000635742 SOGA1O94964 1423 aa16.45■□□□□ 0.22
CACNA1A-216ENST00000635742 LOC105371045A0A1W2PR82 267 aa16.42■□□□□ 0.22
CACNA1A-216ENST00000635742 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
CACNA1A-216ENST00000635742 KIF21AQ7Z4S6 1674 aa16.41■□□□□ 0.22
CACNA1A-216ENST00000635742 CEP164Q9UPV0 1460 aa16.4■□□□□ 0.22
CACNA1A-216ENST00000635742 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
CACNA1A-216ENST00000635742 DNMBPQ6XZF7 1577 aa16.36■□□□□ 0.21
CACNA1A-216ENST00000635742 EEA1Q15075 1411 aa16.36■□□□□ 0.21
CACNA1A-216ENST00000635742 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.2
CACNA1A-216ENST00000635742 TOPBP1Q92547 1522 aa16.32■□□□□ 0.2
CACNA1A-216ENST00000635742 URB2Q14146 1524 aaKnown RBP16.32■□□□□ 0.2
CACNA1A-216ENST00000635742 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
CACNA1A-216ENST00000635742 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
CACNA1A-216ENST00000635742 POLA1P09884 1462 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-216ENST00000635742 KIF21BO75037 1637 aa16.22■□□□□ 0.19
CACNA1A-216ENST00000635742 MRC2Q9UBG0 1479 aa16.21■□□□□ 0.19
CACNA1A-216ENST00000635742 KIF27Q86VH2 1401 aa16.21■□□□□ 0.19
CACNA1A-216ENST00000635742 CUX2O14529 1486 aa16.2■□□□□ 0.18
CACNA1A-216ENST00000635742 RAD54L2Q9Y4B4 1467 aa16.2■□□□□ 0.18
CACNA1A-216ENST00000635742 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
CACNA1A-216ENST00000635742 GOLGA3Q08378 1498 aa16.17■□□□□ 0.18
CACNA1A-216ENST00000635742 ABCA10Q8WWZ4 1543 aa16.16■□□□□ 0.18
CACNA1A-216ENST00000635742 ERCC6Q03468 1493 aa16.15■□□□□ 0.18
CACNA1A-216ENST00000635742 WDR62O43379 1518 aa16.14■□□□□ 0.17
CACNA1A-216ENST00000635742 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-216ENST00000635742 RAPGEF2Q9Y4G8 1499 aa16.12■□□□□ 0.17
CACNA1A-216ENST00000635742 PRXQ9BXM0 1461 aa16.12■□□□□ 0.17
CACNA1A-216ENST00000635742 TARBP1Q13395 1621 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-216ENST00000635742 ERICH3Q5RHP9 1530 aa16.1■□□□□ 0.17
CACNA1A-216ENST00000635742 TNIKQ9UKE5 1360 aa16.09■□□□□ 0.17
CACNA1A-216ENST00000635742 ABCA5Q8WWZ7 1642 aa16.08■□□□□ 0.16
CACNA1A-216ENST00000635742 IGF1RP08069 1367 aa16.06■□□□□ 0.16
CACNA1A-216ENST00000635742 UBTFP17480 764 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-216ENST00000635742 CEP162Q5TB80 1403 aa16.04■□□□□ 0.16
CACNA1A-216ENST00000635742 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
CACNA1A-216ENST00000635742 GAPVD1Q14C86 1478 aa16■□□□□ 0.15
CACNA1A-216ENST00000635742 CUL7Q14999 1698 aa15.99■□□□□ 0.15
CACNA1A-216ENST00000635742 IFT140Q96RY7 1462 aa15.99■□□□□ 0.15
CACNA1A-216ENST00000635742 CARMIL1Q5VZK9 1371 aa15.98■□□□□ 0.15
CACNA1A-216ENST00000635742 PBRM1Q86U86 1689 aa15.97■□□□□ 0.15
CACNA1A-216ENST00000635742 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-216ENST00000635742 AQRO60306 1485 aaKnown RBP eCLIP15.92■□□□□ 0.14
CACNA1A-216ENST00000635742 EIF4G3O43432 1585 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-216ENST00000635742 CLIP1P30622 1438 aa15.91■□□□□ 0.14
CACNA1A-216ENST00000635742 ADAMTS12P58397 1594 aa15.87■□□□□ 0.13
CACNA1A-216ENST00000635742 GRIN2BQ13224 1484 aa15.87■□□□□ 0.13
CACNA1A-216ENST00000635742 CTTNBP2Q8WZ74 1663 aa15.85■□□□□ 0.13
CACNA1A-216ENST00000635742 RANGAP1P46060 587 aaPredicted RBP15.84■□□□□ 0.13
CACNA1A-216ENST00000635742 FHAD1B1AJZ9 1412 aa15.81■□□□□ 0.12
CACNA1A-216ENST00000635742 ARAP1Q96P48 1450 aa15.8■□□□□ 0.12
CACNA1A-216ENST00000635742 SNAPC4Q5SXM2 1469 aa15.8■□□□□ 0.12
CACNA1A-216ENST00000635742 ARHGAP35Q9NRY4 1499 aa15.78■□□□□ 0.12
CACNA1A-216ENST00000635742 VPS8Q8N3P4 1428 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms