RNA–Protein interactions for RNA: ENST00000635722.1

CHRNA7-204, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-204ENST00000635722 NISCHQ9Y2I1 1504 aa52.89■■■■■ 6.06
CHRNA7-204ENST00000635722 ABCC9O60706 1549 aa47.81■■■■■ 5.24
CHRNA7-204ENST00000635722 CCDC180Q9P1Z9 1646 aa47.56■■■■■ 5.2
CHRNA7-204ENST00000635722 RB1CC1Q8TDY2 1594 aa45.33■■■■■ 4.85
CHRNA7-204ENST00000635722 DNAJC5BQ9UF47 199 aa45.01■■■■■ 4.8
CHRNA7-204ENST00000635722 NACADO15069 1562 aa44.94■■■■■ 4.78
CHRNA7-204ENST00000635722 DCAF8L2P0C7V8 631 aa44.64■■■■■ 4.74
CHRNA7-204ENST00000635722 UNC13AQ9UPW8 1703 aa44.5■■■■■ 4.71
CHRNA7-204ENST00000635722 PABPN1Q86U42 306 aaKnown RBP eCLIP44.44■■■■■ 4.7
CHRNA7-204ENST00000635722 MYO15BQ96JP2 1530 aa44.19■■■■■ 4.67
CHRNA7-204ENST00000635722 BICRAQ9NZM4 1560 aa44.15■■■■■ 4.66
CHRNA7-204ENST00000635722 ZCCHC6Q5VYS8 1495 aaKnown RBP43.83■■■■■ 4.61
CHRNA7-204ENST00000635722 DCAF1Q9Y4B6 1507 aa43.6■■■■■ 4.57
CHRNA7-204ENST00000635722 SCRIBQ14160 1630 aa43.45■■■■■ 4.55
CHRNA7-204ENST00000635722 SHROOM4Q9ULL8 1493 aa43.32■■■■■ 4.53
CHRNA7-204ENST00000635722 CC2D2AQ9P2K1 1620 aa43.18■■■■■ 4.5
CHRNA7-204ENST00000635722 CECR2Q9BXF3 1484 aa43.03■■■■■ 4.48
CHRNA7-204ENST00000635722 EIF4G1Q04637 1599 aaKnown RBP43.03■■■■■ 4.48
CHRNA7-204ENST00000635722 NCAPD3P42695 1498 aa41.47■■■■■ 4.23
CHRNA7-204ENST00000635722 ATAD2BQ9ULI0 1458 aa41.39■■■■■ 4.22
CHRNA7-204ENST00000635722 SMARCA4P51532 1647 aa41.36■■■■■ 4.21
CHRNA7-204ENST00000635722 DNAJC5Q9H3Z4 198 aa41.31■■■■■ 4.2
CHRNA7-204ENST00000635722 SMARCA2P51531 1590 aa41.22■■■■■ 4.19
CHRNA7-204ENST00000635722 HMGXB3Q12766 1538 aa41.22■■■■■ 4.19
CHRNA7-204ENST00000635722 ERCC6Q03468 1493 aa41.21■■■■■ 4.19
CHRNA7-204ENST00000635722 CUX2O14529 1486 aa41.17■■■■■ 4.18
CHRNA7-204ENST00000635722 NESP48681 1621 aa41.07■■■■■ 4.16
CHRNA7-204ENST00000635722 BAZ1AQ9NRL2 1556 aaPredicted RBP41.03■■■■■ 4.16
CHRNA7-204ENST00000635722 BAZ1BQ9UIG0 1483 aaKnown RBP40.98■■■■■ 4.15
CHRNA7-204ENST00000635722 PEG3Q9GZU2 1588 aa40.89■■■■■ 4.14
CHRNA7-204ENST00000635722 MROH2BQ7Z745 1585 aa40.82■■■■■ 4.13
CHRNA7-204ENST00000635722 THOC2Q8NI27 1593 aaKnown RBP40.69■■■■■ 4.11
CHRNA7-204ENST00000635722 LAMC3Q9Y6N6 1575 aa40.61■■■■■ 4.09
CHRNA7-204ENST00000635722 KIF21AQ7Z4S6 1674 aa40.56■■■■■ 4.08
CHRNA7-204ENST00000635722 WIZO95785 1651 aa40.37■■■■■ 4.05
CHRNA7-204ENST00000635722 PDS5BQ9NTI5 1447 aa40.31■■■■■ 4.04
CHRNA7-204ENST00000635722 CADPSQ9ULU8 1353 aa40.2■■■■■ 4.03
CHRNA7-204ENST00000635722 MRC2Q9UBG0 1479 aa40.07■■■■■ 4.01
CHRNA7-204ENST00000635722 WDR62O43379 1518 aa40.02■■■■■ 4
CHRNA7-204ENST00000635722 CEP164Q9UPV0 1460 aa39.88■■■■□ 3.97
CHRNA7-204ENST00000635722 RSF1Q96T23 1441 aaPredicted RBP39.83■■■■□ 3.97
CHRNA7-204ENST00000635722 FANCD2Q9BXW9 1451 aa39.82■■■■□ 3.97
CHRNA7-204ENST00000635722 TOP2AP11388 1531 aaKnown RBP39.76■■■■□ 3.96
CHRNA7-204ENST00000635722 CFTRP13569 1480 aa39.74■■■■□ 3.95
CHRNA7-204ENST00000635722 URB2Q14146 1524 aaKnown RBP39.57■■■■□ 3.93
CHRNA7-204ENST00000635722 TRIM41Q8WV44 630 aa39.53■■■■□ 3.92
CHRNA7-204ENST00000635722 PRDM2Q13029 1718 aa39.44■■■■□ 3.9
CHRNA7-204ENST00000635722 CCDC88BA6NC98 1476 aa39.3■■■■□ 3.88
CHRNA7-204ENST00000635722 OSCARQ8IYS5 282 aa39.15■■■■□ 3.86
CHRNA7-204ENST00000635722 ZNF608Q9ULD9 1512 aaPredicted RBP39.14■■■■□ 3.86
CHRNA7-204ENST00000635722 TOPBP1Q92547 1522 aa39.07■■■■□ 3.84
CHRNA7-204ENST00000635722 IFT140Q96RY7 1462 aa39.04■■■■□ 3.84
CHRNA7-204ENST00000635722 EIF4G3O43432 1585 aaKnown RBP38.93■■■■□ 3.82
CHRNA7-204ENST00000635722 RIMBP3CA6NJZ7 1639 aa38.91■■■■□ 3.82
CHRNA7-204ENST00000635722 RIMBP3BA6NNM3 1639 aa38.91■■■■□ 3.82
CHRNA7-204ENST00000635722 RIMBP3Q9UFD9 1639 aa38.91■■■■□ 3.82
CHRNA7-204ENST00000635722 DNMBPQ6XZF7 1577 aa38.91■■■■□ 3.82
CHRNA7-204ENST00000635722 ABCC8Q09428 1581 aa38.78■■■■□ 3.8
CHRNA7-204ENST00000635722 TARBP1Q13395 1621 aaKnown RBP38.78■■■■□ 3.8
CHRNA7-204ENST00000635722 ARHGEF11O15085 1522 aa38.73■■■■□ 3.79
CHRNA7-204ENST00000635722 CHD1O14646 1710 aa38.7■■■■□ 3.79
CHRNA7-204ENST00000635722 AQRO60306 1485 aaKnown RBP eCLIP38.69■■■■□ 3.78
CHRNA7-204ENST00000635722 POLA1P09884 1462 aaPredicted RBP38.66■■■■□ 3.78
CHRNA7-204ENST00000635722 RAD54L2Q9Y4B4 1467 aa38.56■■■■□ 3.76
CHRNA7-204ENST00000635722 FGD5Q6ZNL6 1462 aa38.41■■■■□ 3.74
CHRNA7-204ENST00000635722 TDRD9Q8NDG6 1382 aaKnown RBP38.4■■■■□ 3.74
CHRNA7-204ENST00000635722 SOGA1O94964 1423 aa38.39■■■■□ 3.74
CHRNA7-204ENST00000635722 FBLN2P98095 1184 aa38.39■■■■□ 3.74
CHRNA7-204ENST00000635722 CUX1P39880 1505 aa38.38■■■■□ 3.74
CHRNA7-204ENST00000635722 ARAP1Q96P48 1450 aa38.36■■■■□ 3.73
CHRNA7-204ENST00000635722 CYB5RLQ6IPT4 315 aa38.33■■■■□ 3.73
CHRNA7-204ENST00000635722 SNAPC4Q5SXM2 1469 aa38.33■■■■□ 3.73
CHRNA7-204ENST00000635722 WDR97A6NE52 1622 aa38.23■■■■□ 3.71
CHRNA7-204ENST00000635722 CLASP1Q7Z460 1538 aa38.19■■■■□ 3.7
CHRNA7-204ENST00000635722 MAGI1Q96QZ7 1491 aaPredicted RBP38.12■■■■□ 3.69
CHRNA7-204ENST00000635722 GRIN2BQ13224 1484 aa38.1■■■■□ 3.69
CHRNA7-204ENST00000635722 PBRM1Q86U86 1689 aa38.09■■■■□ 3.69
CHRNA7-204ENST00000635722 SYNJ1O43426 1573 aa38.06■■■■□ 3.68
CHRNA7-204ENST00000635722 CHMP7Q8WUX9 453 aaPredicted RBP38.01■■■■□ 3.68
CHRNA7-204ENST00000635722 SYNJ2O15056 1496 aa38.01■■■■□ 3.67
CHRNA7-204ENST00000635722 ABCA5Q8WWZ7 1642 aa37.96■■■■□ 3.67
CHRNA7-204ENST00000635722 GAPVD1Q14C86 1478 aa37.96■■■■□ 3.67
CHRNA7-204ENST00000635722 TRHP20396 242 aaPredicted RBP37.95■■■■□ 3.67
CHRNA7-204ENST00000635722 SUPT5HO00267 1087 aaKnown RBP37.9■■■■□ 3.66
CHRNA7-204ENST00000635722 ABCA10Q8WWZ4 1543 aa37.9■■■■□ 3.66
CHRNA7-204ENST00000635722 ADAMTS12P58397 1594 aa37.7■■■■□ 3.63
CHRNA7-204ENST00000635722 BIVM-ERCC5R4GMW8 1640 aa37.69■■■■□ 3.62
CHRNA7-204ENST00000635722 ERCC6L2Q5T890 1561 aa37.68■■■■□ 3.62
CHRNA7-204ENST00000635722 GRIN2AQ12879 1464 aa37.66■■■■□ 3.62
CHRNA7-204ENST00000635722 TOP2BQ02880 1626 aa37.65■■■■□ 3.62
CHRNA7-204ENST00000635722 WRNQ14191 1432 aaPredicted RBP eCLIP37.65■■■■□ 3.62
CHRNA7-204ENST00000635722 CEP170Q5SW79 1584 aa37.62■■■■□ 3.61
CHRNA7-204ENST00000635722 NUP160Q12769 1436 aa37.53■■■■□ 3.6
CHRNA7-204ENST00000635722 SHROOM2Q13796 1616 aa37.44■■■■□ 3.58
CHRNA7-204ENST00000635722 FHAD1B1AJZ9 1412 aa37.44■■■■□ 3.58
CHRNA7-204ENST00000635722 ERICH3Q5RHP9 1530 aa37.4■■■■□ 3.58
CHRNA7-204ENST00000635722 RUSC2Q8N2Y8 1516 aa37.18■■■■□ 3.54
CHRNA7-204ENST00000635722 PRG4Q92954 1404 aaPredicted RBP37.16■■■■□ 3.54
CHRNA7-204ENST00000635722 KIF13AQ9H1H9 1805 aa37.09■■■■□ 3.53
CHRNA7-204ENST00000635722 JPH4Q96JJ6 628 aa37.02■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms