RNA–Protein interactions for RNA: ENST00000635108.1

UBASH3A-207, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 4

Gene UBASH3A, Length 572 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-207ENST00000635108 NISCHQ9Y2I1 1504 aa30.39■■■□□ 2.46
UBASH3A-207ENST00000635108 CCDC180Q9P1Z9 1646 aa27.23■■□□□ 1.95
UBASH3A-207ENST00000635108 ABCC9O60706 1549 aa26.96■■□□□ 1.91
UBASH3A-207ENST00000635108 RB1CC1Q8TDY2 1594 aa25.8■■□□□ 1.72
UBASH3A-207ENST00000635108 NACADO15069 1562 aa25.68■■□□□ 1.7
UBASH3A-207ENST00000635108 MYO15BQ96JP2 1530 aa25.44■■□□□ 1.66
UBASH3A-207ENST00000635108 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
UBASH3A-207ENST00000635108 UNC13AQ9UPW8 1703 aa25.27■■□□□ 1.64
UBASH3A-207ENST00000635108 ZCCHC6Q5VYS8 1495 aaKnown RBP25.23■■□□□ 1.63
UBASH3A-207ENST00000635108 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
UBASH3A-207ENST00000635108 DNAJC5BQ9UF47 199 aa25.16■■□□□ 1.62
UBASH3A-207ENST00000635108 PABPN1Q86U42 306 aaKnown RBP eCLIP25.1■■□□□ 1.61
UBASH3A-207ENST00000635108 BICRAQ9NZM4 1560 aa25.07■■□□□ 1.6
UBASH3A-207ENST00000635108 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
UBASH3A-207ENST00000635108 SCRIBQ14160 1630 aa24.75■■□□□ 1.55
UBASH3A-207ENST00000635108 CC2D2AQ9P2K1 1620 aa24.41■■□□□ 1.5
UBASH3A-207ENST00000635108 EIF4G1Q04637 1599 aaKnown RBP24.41■■□□□ 1.5
UBASH3A-207ENST00000635108 CECR2Q9BXF3 1484 aa24.28■■□□□ 1.48
UBASH3A-207ENST00000635108 NCAPD3P42695 1498 aa23.71■■□□□ 1.39
UBASH3A-207ENST00000635108 SMARCA4P51532 1647 aa23.67■■□□□ 1.38
UBASH3A-207ENST00000635108 ATAD2BQ9ULI0 1458 aa23.64■■□□□ 1.38
UBASH3A-207ENST00000635108 SMARCA2P51531 1590 aa23.59■■□□□ 1.37
UBASH3A-207ENST00000635108 BAZ1AQ9NRL2 1556 aaPredicted RBP23.58■■□□□ 1.37
UBASH3A-207ENST00000635108 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
UBASH3A-207ENST00000635108 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
UBASH3A-207ENST00000635108 MROH2BQ7Z745 1585 aa23.41■■□□□ 1.34
UBASH3A-207ENST00000635108 BAZ1BQ9UIG0 1483 aaKnown RBP23.39■■□□□ 1.34
UBASH3A-207ENST00000635108 ERCC6Q03468 1493 aa23.24■■□□□ 1.31
UBASH3A-207ENST00000635108 NESP48681 1621 aa23.23■■□□□ 1.31
UBASH3A-207ENST00000635108 CUX2O14529 1486 aa23.22■■□□□ 1.31
UBASH3A-207ENST00000635108 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.3
UBASH3A-207ENST00000635108 WIZO95785 1651 aa23.14■■□□□ 1.29
UBASH3A-207ENST00000635108 THOC2Q8NI27 1593 aaKnown RBP23.01■■□□□ 1.27
UBASH3A-207ENST00000635108 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
UBASH3A-207ENST00000635108 DNAJC5Q9H3Z4 198 aa22.98■■□□□ 1.27
UBASH3A-207ENST00000635108 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
UBASH3A-207ENST00000635108 CADPSQ9ULU8 1353 aa22.97■■□□□ 1.27
UBASH3A-207ENST00000635108 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
UBASH3A-207ENST00000635108 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
UBASH3A-207ENST00000635108 CFTRP13569 1480 aa22.76■■□□□ 1.23
UBASH3A-207ENST00000635108 MRC2Q9UBG0 1479 aa22.76■■□□□ 1.23
UBASH3A-207ENST00000635108 WDR62O43379 1518 aa22.72■■□□□ 1.23
UBASH3A-207ENST00000635108 FANCD2Q9BXW9 1451 aa22.7■■□□□ 1.22
UBASH3A-207ENST00000635108 CEP164Q9UPV0 1460 aa22.7■■□□□ 1.22
UBASH3A-207ENST00000635108 PRDM2Q13029 1718 aa22.6■■□□□ 1.21
UBASH3A-207ENST00000635108 CCDC88BA6NC98 1476 aa22.59■■□□□ 1.21
UBASH3A-207ENST00000635108 URB2Q14146 1524 aaKnown RBP22.52■■□□□ 1.19
UBASH3A-207ENST00000635108 TOPBP1Q92547 1522 aa22.31■■□□□ 1.16
UBASH3A-207ENST00000635108 ABCC8Q09428 1581 aa22.28■■□□□ 1.16
UBASH3A-207ENST00000635108 IFT140Q96RY7 1462 aa22.26■■□□□ 1.15
UBASH3A-207ENST00000635108 DNMBPQ6XZF7 1577 aa22.25■■□□□ 1.15
UBASH3A-207ENST00000635108 ZNF608Q9ULD9 1512 aaPredicted RBP22.19■■□□□ 1.14
UBASH3A-207ENST00000635108 OSCARQ8IYS5 282 aa22.15■■□□□ 1.14
UBASH3A-207ENST00000635108 TARBP1Q13395 1621 aaKnown RBP22.12■■□□□ 1.13
UBASH3A-207ENST00000635108 EIF4G3O43432 1585 aaKnown RBP22.09■■□□□ 1.13
UBASH3A-207ENST00000635108 POLA1P09884 1462 aaPredicted RBP22.08■■□□□ 1.12
UBASH3A-207ENST00000635108 SUPT5HO00267 1087 aaKnown RBP22.01■■□□□ 1.11
UBASH3A-207ENST00000635108 AQRO60306 1485 aaKnown RBP eCLIP22■■□□□ 1.11
UBASH3A-207ENST00000635108 CUX1P39880 1505 aa21.99■■□□□ 1.11
UBASH3A-207ENST00000635108 RAD54L2Q9Y4B4 1467 aa21.97■■□□□ 1.11
UBASH3A-207ENST00000635108 SOGA1O94964 1423 aa21.97■■□□□ 1.11
UBASH3A-207ENST00000635108 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
UBASH3A-207ENST00000635108 TRIM41Q8WV44 630 aa21.94■■□□□ 1.1
UBASH3A-207ENST00000635108 WDR97A6NE52 1622 aa21.92■■□□□ 1.1
UBASH3A-207ENST00000635108 CHD1O14646 1710 aa21.91■■□□□ 1.1
UBASH3A-207ENST00000635108 TDRD9Q8NDG6 1382 aaKnown RBP21.88■■□□□ 1.09
UBASH3A-207ENST00000635108 RIMBP3CA6NJZ7 1639 aa21.87■■□□□ 1.09
UBASH3A-207ENST00000635108 RIMBP3BA6NNM3 1639 aa21.87■■□□□ 1.09
UBASH3A-207ENST00000635108 RIMBP3Q9UFD9 1639 aa21.87■■□□□ 1.09
UBASH3A-207ENST00000635108 ARHGEF11O15085 1522 aa21.81■■□□□ 1.08
UBASH3A-207ENST00000635108 SNAPC4Q5SXM2 1469 aa21.78■■□□□ 1.08
UBASH3A-207ENST00000635108 GRIN2BQ13224 1484 aa21.77■■□□□ 1.07
UBASH3A-207ENST00000635108 MAGI1Q96QZ7 1491 aaPredicted RBP21.77■■□□□ 1.07
UBASH3A-207ENST00000635108 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
UBASH3A-207ENST00000635108 FBLN2P98095 1184 aa21.75■■□□□ 1.07
UBASH3A-207ENST00000635108 PBRM1Q86U86 1689 aa21.72■■□□□ 1.07
UBASH3A-207ENST00000635108 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
UBASH3A-207ENST00000635108 BIVM-ERCC5R4GMW8 1640 aa21.71■■□□□ 1.07
UBASH3A-207ENST00000635108 TOP2BQ02880 1626 aa21.7■■□□□ 1.06
UBASH3A-207ENST00000635108 ABCA5Q8WWZ7 1642 aa21.7■■□□□ 1.06
UBASH3A-207ENST00000635108 SYNJ2O15056 1496 aa21.68■■□□□ 1.06
UBASH3A-207ENST00000635108 CLASP1Q7Z460 1538 aa21.67■■□□□ 1.06
UBASH3A-207ENST00000635108 WRNQ14191 1432 aaPredicted RBP eCLIP21.67■■□□□ 1.06
UBASH3A-207ENST00000635108 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
UBASH3A-207ENST00000635108 SYNJ1O43426 1573 aa21.65■■□□□ 1.06
UBASH3A-207ENST00000635108 ARAP1Q96P48 1450 aa21.62■■□□□ 1.05
UBASH3A-207ENST00000635108 CYB5RLQ6IPT4 315 aa21.58■■□□□ 1.05
UBASH3A-207ENST00000635108 ADAMTS12P58397 1594 aa21.51■■□□□ 1.03
UBASH3A-207ENST00000635108 GRIN2AQ12879 1464 aa21.49■■□□□ 1.03
UBASH3A-207ENST00000635108 ERICH3Q5RHP9 1530 aa21.49■■□□□ 1.03
UBASH3A-207ENST00000635108 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
UBASH3A-207ENST00000635108 NUP160Q12769 1436 aa21.44■■□□□ 1.02
UBASH3A-207ENST00000635108 CEP170Q5SW79 1584 aa21.41■■□□□ 1.02
UBASH3A-207ENST00000635108 SHROOM2Q13796 1616 aa21.34■■□□□ 1.01
UBASH3A-207ENST00000635108 ERCC6L2Q5T890 1561 aa21.31■■□□□ 1
UBASH3A-207ENST00000635108 TRHP20396 242 aaPredicted RBP21.25■□□□□ 0.99
UBASH3A-207ENST00000635108 IGF1RP08069 1367 aa21.23■□□□□ 0.99
UBASH3A-207ENST00000635108 KIF27Q86VH2 1401 aa21.23■□□□□ 0.99
UBASH3A-207ENST00000635108 RUSC2Q8N2Y8 1516 aa21.2■□□□□ 0.98
UBASH3A-207ENST00000635108 CUL7Q14999 1698 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms