RNA–Protein interactions for RNA: ENST00000635096.1

GABRA1-210, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-210ENST00000635096 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
GABRA1-210ENST00000635096 CCDC180Q9P1Z9 1646 aa29.71■■■□□ 2.35
GABRA1-210ENST00000635096 ABCC9O60706 1549 aa29.17■■■□□ 2.26
GABRA1-210ENST00000635096 RB1CC1Q8TDY2 1594 aa28.06■■■□□ 2.08
GABRA1-210ENST00000635096 NACADO15069 1562 aa28.02■■■□□ 2.08
GABRA1-210ENST00000635096 DCAF8L2P0C7V8 631 aa27.95■■■□□ 2.06
GABRA1-210ENST00000635096 MYO15BQ96JP2 1530 aa27.86■■■□□ 2.05
GABRA1-210ENST00000635096 ZCCHC6Q5VYS8 1495 aaKnown RBP27.77■■■□□ 2.04
GABRA1-210ENST00000635096 DCAF1Q9Y4B6 1507 aa27.67■■■□□ 2.02
GABRA1-210ENST00000635096 PABPN1Q86U42 306 aaKnown RBP eCLIP27.26■■□□□ 1.95
GABRA1-210ENST00000635096 UNC13AQ9UPW8 1703 aa27.25■■□□□ 1.95
GABRA1-210ENST00000635096 BICRAQ9NZM4 1560 aa27.14■■□□□ 1.94
GABRA1-210ENST00000635096 SCRIBQ14160 1630 aa27.04■■□□□ 1.92
GABRA1-210ENST00000635096 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
GABRA1-210ENST00000635096 DNAJC5BQ9UF47 199 aa26.9■■□□□ 1.9
GABRA1-210ENST00000635096 EIF4G1Q04637 1599 aaKnown RBP26.47■■□□□ 1.83
GABRA1-210ENST00000635096 CC2D2AQ9P2K1 1620 aa26.37■■□□□ 1.81
GABRA1-210ENST00000635096 CECR2Q9BXF3 1484 aa26.28■■□□□ 1.8
GABRA1-210ENST00000635096 BAZ1AQ9NRL2 1556 aaPredicted RBP25.9■■□□□ 1.74
GABRA1-210ENST00000635096 SMARCA4P51532 1647 aa25.89■■□□□ 1.74
GABRA1-210ENST00000635096 NCAPD3P42695 1498 aa25.88■■□□□ 1.73
GABRA1-210ENST00000635096 ATAD2BQ9ULI0 1458 aa25.84■■□□□ 1.73
GABRA1-210ENST00000635096 SMARCA2P51531 1590 aa25.81■■□□□ 1.72
GABRA1-210ENST00000635096 HMGXB3Q12766 1538 aa25.7■■□□□ 1.7
GABRA1-210ENST00000635096 PEG3Q9GZU2 1588 aa25.69■■□□□ 1.7
GABRA1-210ENST00000635096 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
GABRA1-210ENST00000635096 BAZ1BQ9UIG0 1483 aaKnown RBP25.61■■□□□ 1.69
GABRA1-210ENST00000635096 RSF1Q96T23 1441 aaPredicted RBP25.39■■□□□ 1.66
GABRA1-210ENST00000635096 WIZO95785 1651 aa25.35■■□□□ 1.65
GABRA1-210ENST00000635096 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
GABRA1-210ENST00000635096 NESP48681 1621 aa25.18■■□□□ 1.62
GABRA1-210ENST00000635096 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
GABRA1-210ENST00000635096 TOP2AP11388 1531 aaKnown RBP25.15■■□□□ 1.62
GABRA1-210ENST00000635096 CADPSQ9ULU8 1353 aa25.12■■□□□ 1.61
GABRA1-210ENST00000635096 PDS5BQ9NTI5 1447 aa25.07■■□□□ 1.6
GABRA1-210ENST00000635096 CUX2O14529 1486 aa25.02■■□□□ 1.6
GABRA1-210ENST00000635096 CFTRP13569 1480 aa24.92■■□□□ 1.58
GABRA1-210ENST00000635096 CCDC88BA6NC98 1476 aa24.86■■□□□ 1.57
GABRA1-210ENST00000635096 KIF21AQ7Z4S6 1674 aa24.83■■□□□ 1.57
GABRA1-210ENST00000635096 THOC2Q8NI27 1593 aaKnown RBP24.83■■□□□ 1.57
GABRA1-210ENST00000635096 FANCD2Q9BXW9 1451 aa24.79■■□□□ 1.56
GABRA1-210ENST00000635096 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
GABRA1-210ENST00000635096 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
GABRA1-210ENST00000635096 WDR62O43379 1518 aa24.67■■□□□ 1.54
GABRA1-210ENST00000635096 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
GABRA1-210ENST00000635096 PRDM2Q13029 1718 aa24.58■■□□□ 1.53
GABRA1-210ENST00000635096 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
GABRA1-210ENST00000635096 ABCC8Q09428 1581 aa24.44■■□□□ 1.5
GABRA1-210ENST00000635096 DNAJC5Q9H3Z4 198 aa24.41■■□□□ 1.5
GABRA1-210ENST00000635096 TOPBP1Q92547 1522 aa24.36■■□□□ 1.49
GABRA1-210ENST00000635096 DNMBPQ6XZF7 1577 aa24.32■■□□□ 1.48
GABRA1-210ENST00000635096 IFT140Q96RY7 1462 aa24.28■■□□□ 1.48
GABRA1-210ENST00000635096 POLA1P09884 1462 aaPredicted RBP24.15■■□□□ 1.46
GABRA1-210ENST00000635096 CUX1P39880 1505 aa24.1■■□□□ 1.45
GABRA1-210ENST00000635096 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
GABRA1-210ENST00000635096 SOGA1O94964 1423 aa24.09■■□□□ 1.45
GABRA1-210ENST00000635096 TARBP1Q13395 1621 aaKnown RBP24.07■■□□□ 1.44
GABRA1-210ENST00000635096 FGD5Q6ZNL6 1462 aa24.06■■□□□ 1.44
GABRA1-210ENST00000635096 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
GABRA1-210ENST00000635096 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
GABRA1-210ENST00000635096 OSCARQ8IYS5 282 aa23.99■■□□□ 1.43
GABRA1-210ENST00000635096 AQRO60306 1485 aaKnown RBP eCLIP23.99■■□□□ 1.43
GABRA1-210ENST00000635096 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.43
GABRA1-210ENST00000635096 WDR97A6NE52 1622 aa23.95■■□□□ 1.43
GABRA1-210ENST00000635096 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
GABRA1-210ENST00000635096 TOP2BQ02880 1626 aa23.88■■□□□ 1.41
GABRA1-210ENST00000635096 ABCA10Q8WWZ4 1543 aa23.86■■□□□ 1.41
GABRA1-210ENST00000635096 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
GABRA1-210ENST00000635096 GRIN2BQ13224 1484 aa23.82■■□□□ 1.4
GABRA1-210ENST00000635096 SYNJ1O43426 1573 aa23.82■■□□□ 1.4
GABRA1-210ENST00000635096 GAPVD1Q14C86 1478 aa23.79■■□□□ 1.4
GABRA1-210ENST00000635096 MAGI1Q96QZ7 1491 aaPredicted RBP23.78■■□□□ 1.4
GABRA1-210ENST00000635096 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
GABRA1-210ENST00000635096 FBLN2P98095 1184 aa23.75■■□□□ 1.39
GABRA1-210ENST00000635096 ABCA5Q8WWZ7 1642 aa23.71■■□□□ 1.39
GABRA1-210ENST00000635096 CHMP7Q8WUX9 453 aaPredicted RBP23.71■■□□□ 1.39
GABRA1-210ENST00000635096 SYNJ2O15056 1496 aa23.68■■□□□ 1.38
GABRA1-210ENST00000635096 CHD1O14646 1710 aa23.65■■□□□ 1.38
GABRA1-210ENST00000635096 PBRM1Q86U86 1689 aa23.64■■□□□ 1.37
GABRA1-210ENST00000635096 ERICH3Q5RHP9 1530 aa23.58■■□□□ 1.36
GABRA1-210ENST00000635096 FHAD1B1AJZ9 1412 aa23.53■■□□□ 1.36
GABRA1-210ENST00000635096 ARHGEF11O15085 1522 aa23.52■■□□□ 1.36
GABRA1-210ENST00000635096 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
GABRA1-210ENST00000635096 ADAMTS12P58397 1594 aa23.5■■□□□ 1.35
GABRA1-210ENST00000635096 TRIM41Q8WV44 630 aa23.5■■□□□ 1.35
GABRA1-210ENST00000635096 GRIN2AQ12879 1464 aa23.49■■□□□ 1.35
GABRA1-210ENST00000635096 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
GABRA1-210ENST00000635096 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
GABRA1-210ENST00000635096 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
GABRA1-210ENST00000635096 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
GABRA1-210ENST00000635096 NUP160Q12769 1436 aa23.41■■□□□ 1.34
GABRA1-210ENST00000635096 IGF1RP08069 1367 aa23.4■■□□□ 1.34
GABRA1-210ENST00000635096 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
GABRA1-210ENST00000635096 CEP170Q5SW79 1584 aa23.32■■□□□ 1.32
GABRA1-210ENST00000635096 ARAP1Q96P48 1450 aa23.3■■□□□ 1.32
GABRA1-210ENST00000635096 CUL7Q14999 1698 aa23.29■■□□□ 1.32
GABRA1-210ENST00000635096 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.31
GABRA1-210ENST00000635096 JPH4Q96JJ6 628 aa23.2■■□□□ 1.3
GABRA1-210ENST00000635096 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
GABRA1-210ENST00000635096 KIAA0586Q9BVV6 1533 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms