RNA–Protein interactions for RNA: ENST00000634536.1

SMARCA2-224, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-224ENST00000634536 NISCHQ9Y2I1 1504 aa21.88■■□□□ 1.09
SMARCA2-224ENST00000634536 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
SMARCA2-224ENST00000634536 ZCCHC6Q5VYS8 1495 aaKnown RBP18.39■□□□□ 0.53
SMARCA2-224ENST00000634536 DCAF1Q9Y4B6 1507 aa18.27■□□□□ 0.51
SMARCA2-224ENST00000634536 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
SMARCA2-224ENST00000634536 AEBP2Q6ZN18 517 aaPredicted RBP18.1■□□□□ 0.49
SMARCA2-224ENST00000634536 ABCC9O60706 1549 aa18.05■□□□□ 0.48
SMARCA2-224ENST00000634536 NACADO15069 1562 aa17.96■□□□□ 0.46
SMARCA2-224ENST00000634536 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
SMARCA2-224ENST00000634536 DCAF8L2P0C7V8 631 aa17.74■□□□□ 0.43
SMARCA2-224ENST00000634536 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
SMARCA2-224ENST00000634536 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
SMARCA2-224ENST00000634536 UNC13AQ9UPW8 1703 aa17.41■□□□□ 0.38
SMARCA2-224ENST00000634536 SHROOM4Q9ULL8 1493 aa17.4■□□□□ 0.38
SMARCA2-224ENST00000634536 BICRAQ9NZM4 1560 aa17.21■□□□□ 0.35
SMARCA2-224ENST00000634536 BAZ1AQ9NRL2 1556 aaPredicted RBP16.96■□□□□ 0.31
SMARCA2-224ENST00000634536 CECR2Q9BXF3 1484 aa16.88■□□□□ 0.29
SMARCA2-224ENST00000634536 PABPN1Q86U42 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMARCA2-224ENST00000634536 SMARCA4P51532 1647 aa16.87■□□□□ 0.29
SMARCA2-224ENST00000634536 RSF1Q96T23 1441 aaPredicted RBP16.85■□□□□ 0.29
SMARCA2-224ENST00000634536 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
SMARCA2-224ENST00000634536 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
SMARCA2-224ENST00000634536 EIF4G1Q04637 1599 aaKnown RBP16.7■□□□□ 0.26
SMARCA2-224ENST00000634536 SUPT5HO00267 1087 aaKnown RBP16.68■□□□□ 0.26
SMARCA2-224ENST00000634536 WIZO95785 1651 aa16.67■□□□□ 0.26
SMARCA2-224ENST00000634536 SMARCA2P51531 1590 aa16.65■□□□□ 0.26
SMARCA2-224ENST00000634536 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
SMARCA2-224ENST00000634536 ATAD2BQ9ULI0 1458 aa16.58■□□□□ 0.24
SMARCA2-224ENST00000634536 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
SMARCA2-224ENST00000634536 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
SMARCA2-224ENST00000634536 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
SMARCA2-224ENST00000634536 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
SMARCA2-224ENST00000634536 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
SMARCA2-224ENST00000634536 PRDM2Q13029 1718 aa16.14■□□□□ 0.17
SMARCA2-224ENST00000634536 CFTRP13569 1480 aa16.1■□□□□ 0.17
SMARCA2-224ENST00000634536 LAMC3Q9Y6N6 1575 aa16.03■□□□□ 0.16
SMARCA2-224ENST00000634536 CADPSQ9ULU8 1353 aa16.02■□□□□ 0.16
SMARCA2-224ENST00000634536 DNAJC5BQ9UF47 199 aa15.94■□□□□ 0.14
SMARCA2-224ENST00000634536 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
SMARCA2-224ENST00000634536 ABCC8Q09428 1581 aa15.87■□□□□ 0.13
SMARCA2-224ENST00000634536 BIVM-ERCC5R4GMW8 1640 aa15.86■□□□□ 0.13
SMARCA2-224ENST00000634536 TOP2BQ02880 1626 aa15.85■□□□□ 0.13
SMARCA2-224ENST00000634536 PDS5BQ9NTI5 1447 aa15.84■□□□□ 0.13
SMARCA2-224ENST00000634536 TRIM41Q8WV44 630 aa15.83■□□□□ 0.12
SMARCA2-224ENST00000634536 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.12
SMARCA2-224ENST00000634536 SYNJ1O43426 1573 aa15.81■□□□□ 0.12
SMARCA2-224ENST00000634536 NESP48681 1621 aa15.8■□□□□ 0.12
SMARCA2-224ENST00000634536 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
SMARCA2-224ENST00000634536 CUX1P39880 1505 aa15.75■□□□□ 0.11
SMARCA2-224ENST00000634536 DNMBPQ6XZF7 1577 aa15.75■□□□□ 0.11
SMARCA2-224ENST00000634536 KIF21AQ7Z4S6 1674 aa15.73■□□□□ 0.11
SMARCA2-224ENST00000634536 EEA1Q15075 1411 aa15.7■□□□□ 0.1
SMARCA2-224ENST00000634536 TOPBP1Q92547 1522 aa15.66■□□□□ 0.1
SMARCA2-224ENST00000634536 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
SMARCA2-224ENST00000634536 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
SMARCA2-224ENST00000634536 WDR62O43379 1518 aa15.61■□□□□ 0.09
SMARCA2-224ENST00000634536 FGD5Q6ZNL6 1462 aa15.6■□□□□ 0.09
SMARCA2-224ENST00000634536 PHF23Q9BUL5 403 aaPredicted RBP15.6■□□□□ 0.09
SMARCA2-224ENST00000634536 POLA1P09884 1462 aaPredicted RBP15.57■□□□□ 0.08
SMARCA2-224ENST00000634536 THOC2Q8NI27 1593 aaKnown RBP15.57■□□□□ 0.08
SMARCA2-224ENST00000634536 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
SMARCA2-224ENST00000634536 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
SMARCA2-224ENST00000634536 ABCA10Q8WWZ4 1543 aa15.54■□□□□ 0.08
SMARCA2-224ENST00000634536 SOGA1O94964 1423 aa15.53■□□□□ 0.08
SMARCA2-224ENST00000634536 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
SMARCA2-224ENST00000634536 KIF21BO75037 1637 aa15.49■□□□□ 0.07
SMARCA2-224ENST00000634536 TARBP1Q13395 1621 aaKnown RBP15.48■□□□□ 0.07
SMARCA2-224ENST00000634536 RUSC2Q8N2Y8 1516 aa15.45■□□□□ 0.06
SMARCA2-224ENST00000634536 ABCA5Q8WWZ7 1642 aa15.44■□□□□ 0.06
SMARCA2-224ENST00000634536 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
SMARCA2-224ENST00000634536 CUX2O14529 1486 aa15.44■□□□□ 0.06
SMARCA2-224ENST00000634536 IFT140Q96RY7 1462 aa15.44■□□□□ 0.06
SMARCA2-224ENST00000634536 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
SMARCA2-224ENST00000634536 RAD54L2Q9Y4B4 1467 aa15.4■□□□□ 0.06
SMARCA2-224ENST00000634536 CUL7Q14999 1698 aa15.4■□□□□ 0.06
SMARCA2-224ENST00000634536 PRXQ9BXM0 1461 aa15.4■□□□□ 0.06
SMARCA2-224ENST00000634536 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
SMARCA2-224ENST00000634536 FAM9AQ8IZU1 332 aaPredicted RBP15.35■□□□□ 0.05
SMARCA2-224ENST00000634536 IGF1RP08069 1367 aa15.34■□□□□ 0.05
SMARCA2-224ENST00000634536 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.05
SMARCA2-224ENST00000634536 PBRM1Q86U86 1689 aa15.33■□□□□ 0.04
SMARCA2-224ENST00000634536 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
SMARCA2-224ENST00000634536 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
SMARCA2-224ENST00000634536 GRIN2BQ13224 1484 aa15.27■□□□□ 0.04
SMARCA2-224ENST00000634536 RAPGEF2Q9Y4G8 1499 aa15.27■□□□□ 0.04
SMARCA2-224ENST00000634536 LOC105371045A0A1W2PR82 267 aa15.26■□□□□ 0.03
SMARCA2-224ENST00000634536 CARMIL1Q5VZK9 1371 aa15.25■□□□□ 0.03
SMARCA2-224ENST00000634536 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
SMARCA2-224ENST00000634536 ADAMTS12P58397 1594 aa15.23■□□□□ 0.03
SMARCA2-224ENST00000634536 ZNF608Q9ULD9 1512 aaPredicted RBP15.22■□□□□ 0.03
SMARCA2-224ENST00000634536 MAGI1Q96QZ7 1491 aaPredicted RBP15.21■□□□□ 0.03
SMARCA2-224ENST00000634536 FHAD1B1AJZ9 1412 aa15.2■□□□□ 0.02
SMARCA2-224ENST00000634536 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMARCA2-224ENST00000634536 CTTNBP2Q8WZ74 1663 aa15.18■□□□□ 0.02
SMARCA2-224ENST00000634536 CEP162Q5TB80 1403 aa15.15■□□□□ 0.02
SMARCA2-224ENST00000634536 UBTFP17480 764 aaKnown RBP15.14■□□□□ 0.01
SMARCA2-224ENST00000634536 SENP3Q9H4L4 574 aaPredicted RBP15.13■□□□□ 0.01
SMARCA2-224ENST00000634536 SYNJ2O15056 1496 aa15.12■□□□□ 0.01
SMARCA2-224ENST00000634536 SNAPC4Q5SXM2 1469 aa15.12■□□□□ 0.01
SMARCA2-224ENST00000634536 GRIN2AQ12879 1464 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms