RNA–Protein interactions for RNA: ENST00000634287.1

SMARCA2-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 424 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-219ENST00000634287 NISCHQ9Y2I1 1504 aa39.39■■■■□ 3.9
SMARCA2-219ENST00000634287 ABCC9O60706 1549 aa35.44■■■■□ 3.26
SMARCA2-219ENST00000634287 CCDC180Q9P1Z9 1646 aa35.37■■■■□ 3.25
SMARCA2-219ENST00000634287 RB1CC1Q8TDY2 1594 aa33.73■■■□□ 2.99
SMARCA2-219ENST00000634287 NACADO15069 1562 aa33.48■■■□□ 2.95
SMARCA2-219ENST00000634287 DCAF8L2P0C7V8 631 aa33.39■■■□□ 2.94
SMARCA2-219ENST00000634287 DNAJC5BQ9UF47 199 aa33.34■■■□□ 2.93
SMARCA2-219ENST00000634287 PABPN1Q86U42 306 aaKnown RBP eCLIP33.03■■■□□ 2.88
SMARCA2-219ENST00000634287 MYO15BQ96JP2 1530 aa33■■■□□ 2.87
SMARCA2-219ENST00000634287 UNC13AQ9UPW8 1703 aa32.94■■■□□ 2.86
SMARCA2-219ENST00000634287 BICRAQ9NZM4 1560 aa32.7■■■□□ 2.82
SMARCA2-219ENST00000634287 ZCCHC6Q5VYS8 1495 aaKnown RBP32.59■■■□□ 2.81
SMARCA2-219ENST00000634287 DCAF1Q9Y4B6 1507 aa32.54■■■□□ 2.8
SMARCA2-219ENST00000634287 SHROOM4Q9ULL8 1493 aa32.29■■■□□ 2.76
SMARCA2-219ENST00000634287 SCRIBQ14160 1630 aa32.2■■■□□ 2.75
SMARCA2-219ENST00000634287 CC2D2AQ9P2K1 1620 aa32.02■■■□□ 2.72
SMARCA2-219ENST00000634287 CECR2Q9BXF3 1484 aa31.96■■■□□ 2.71
SMARCA2-219ENST00000634287 EIF4G1Q04637 1599 aaKnown RBP31.93■■■□□ 2.7
SMARCA2-219ENST00000634287 NCAPD3P42695 1498 aa30.92■■■□□ 2.54
SMARCA2-219ENST00000634287 ATAD2BQ9ULI0 1458 aa30.79■■■□□ 2.52
SMARCA2-219ENST00000634287 DNAJC5Q9H3Z4 198 aa30.73■■■□□ 2.51
SMARCA2-219ENST00000634287 SMARCA4P51532 1647 aa30.73■■■□□ 2.51
SMARCA2-219ENST00000634287 SMARCA2P51531 1590 aa30.72■■■□□ 2.51
SMARCA2-219ENST00000634287 HMGXB3Q12766 1538 aa30.65■■■□□ 2.5
SMARCA2-219ENST00000634287 ERCC6Q03468 1493 aa30.64■■■□□ 2.5
SMARCA2-219ENST00000634287 CUX2O14529 1486 aa30.61■■■□□ 2.49
SMARCA2-219ENST00000634287 BAZ1AQ9NRL2 1556 aaPredicted RBP30.59■■■□□ 2.49
SMARCA2-219ENST00000634287 BAZ1BQ9UIG0 1483 aaKnown RBP30.5■■■□□ 2.47
SMARCA2-219ENST00000634287 PEG3Q9GZU2 1588 aa30.44■■■□□ 2.46
SMARCA2-219ENST00000634287 NESP48681 1621 aa30.41■■■□□ 2.46
SMARCA2-219ENST00000634287 MROH2BQ7Z745 1585 aa30.32■■■□□ 2.45
SMARCA2-219ENST00000634287 LAMC3Q9Y6N6 1575 aa30.24■■■□□ 2.43
SMARCA2-219ENST00000634287 PDS5BQ9NTI5 1447 aa30.1■■■□□ 2.41
SMARCA2-219ENST00000634287 THOC2Q8NI27 1593 aaKnown RBP30.1■■■□□ 2.41
SMARCA2-219ENST00000634287 KIF21AQ7Z4S6 1674 aa30.03■■■□□ 2.4
SMARCA2-219ENST00000634287 CADPSQ9ULU8 1353 aa29.99■■■□□ 2.39
SMARCA2-219ENST00000634287 WIZO95785 1651 aa29.97■■■□□ 2.39
SMARCA2-219ENST00000634287 MRC2Q9UBG0 1479 aa29.79■■■□□ 2.36
SMARCA2-219ENST00000634287 WDR62O43379 1518 aa29.7■■■□□ 2.34
SMARCA2-219ENST00000634287 RSF1Q96T23 1441 aaPredicted RBP29.69■■■□□ 2.34
SMARCA2-219ENST00000634287 CEP164Q9UPV0 1460 aa29.66■■■□□ 2.34
SMARCA2-219ENST00000634287 FANCD2Q9BXW9 1451 aa29.62■■■□□ 2.33
SMARCA2-219ENST00000634287 CFTRP13569 1480 aa29.61■■■□□ 2.33
SMARCA2-219ENST00000634287 TOP2AP11388 1531 aaKnown RBP29.58■■■□□ 2.33
SMARCA2-219ENST00000634287 URB2Q14146 1524 aaKnown RBP29.35■■■□□ 2.29
SMARCA2-219ENST00000634287 TRIM41Q8WV44 630 aa29.34■■■□□ 2.29
SMARCA2-219ENST00000634287 PRDM2Q13029 1718 aa29.3■■■□□ 2.28
SMARCA2-219ENST00000634287 OSCARQ8IYS5 282 aa29.28■■■□□ 2.28
SMARCA2-219ENST00000634287 CCDC88BA6NC98 1476 aa29.28■■■□□ 2.28
SMARCA2-219ENST00000634287 IFT140Q96RY7 1462 aa29.08■■■□□ 2.25
SMARCA2-219ENST00000634287 ABCC8Q09428 1581 aa29.05■■■□□ 2.24
SMARCA2-219ENST00000634287 TOPBP1Q92547 1522 aa29.04■■■□□ 2.24
SMARCA2-219ENST00000634287 ZNF608Q9ULD9 1512 aaPredicted RBP29■■■□□ 2.23
SMARCA2-219ENST00000634287 DNMBPQ6XZF7 1577 aa28.92■■■□□ 2.22
SMARCA2-219ENST00000634287 EIF4G3O43432 1585 aaKnown RBP28.83■■■□□ 2.21
SMARCA2-219ENST00000634287 RIMBP3CA6NJZ7 1639 aa28.8■■■□□ 2.2
SMARCA2-219ENST00000634287 RIMBP3BA6NNM3 1639 aa28.8■■■□□ 2.2
SMARCA2-219ENST00000634287 RIMBP3Q9UFD9 1639 aa28.8■■■□□ 2.2
SMARCA2-219ENST00000634287 TARBP1Q13395 1621 aaKnown RBP28.78■■■□□ 2.2
SMARCA2-219ENST00000634287 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.2
SMARCA2-219ENST00000634287 POLA1P09884 1462 aaPredicted RBP28.73■■■□□ 2.19
SMARCA2-219ENST00000634287 ARHGEF11O15085 1522 aa28.7■■■□□ 2.19
SMARCA2-219ENST00000634287 FBLN2P98095 1184 aa28.66■■■□□ 2.18
SMARCA2-219ENST00000634287 SOGA1O94964 1423 aa28.66■■■□□ 2.18
SMARCA2-219ENST00000634287 CHD1O14646 1710 aa28.65■■■□□ 2.18
SMARCA2-219ENST00000634287 RAD54L2Q9Y4B4 1467 aa28.63■■■□□ 2.17
SMARCA2-219ENST00000634287 TDRD9Q8NDG6 1382 aaKnown RBP28.59■■■□□ 2.17
SMARCA2-219ENST00000634287 CYB5RLQ6IPT4 315 aa28.58■■■□□ 2.17
SMARCA2-219ENST00000634287 FGD5Q6ZNL6 1462 aa28.54■■■□□ 2.16
SMARCA2-219ENST00000634287 WDR97A6NE52 1622 aa28.51■■■□□ 2.15
SMARCA2-219ENST00000634287 CUX1P39880 1505 aa28.48■■■□□ 2.15
SMARCA2-219ENST00000634287 CHMP7Q8WUX9 453 aaPredicted RBP28.45■■■□□ 2.14
SMARCA2-219ENST00000634287 SNAPC4Q5SXM2 1469 aa28.44■■■□□ 2.14
SMARCA2-219ENST00000634287 ARAP1Q96P48 1450 aa28.4■■■□□ 2.14
SMARCA2-219ENST00000634287 MAGI1Q96QZ7 1491 aaPredicted RBP28.4■■■□□ 2.14
SMARCA2-219ENST00000634287 GRIN2BQ13224 1484 aa28.39■■■□□ 2.13
SMARCA2-219ENST00000634287 SUPT5HO00267 1087 aaKnown RBP28.38■■■□□ 2.13
SMARCA2-219ENST00000634287 SYNJ1O43426 1573 aa28.33■■■□□ 2.12
SMARCA2-219ENST00000634287 TRHP20396 242 aaPredicted RBP28.31■■■□□ 2.12
SMARCA2-219ENST00000634287 SYNJ2O15056 1496 aa28.31■■■□□ 2.12
SMARCA2-219ENST00000634287 CLASP1Q7Z460 1538 aa28.3■■■□□ 2.12
SMARCA2-219ENST00000634287 GAPVD1Q14C86 1478 aa28.28■■■□□ 2.12
SMARCA2-219ENST00000634287 PBRM1Q86U86 1689 aa28.24■■■□□ 2.11
SMARCA2-219ENST00000634287 ABCA10Q8WWZ4 1543 aa28.23■■■□□ 2.11
SMARCA2-219ENST00000634287 ABCA5Q8WWZ7 1642 aa28.15■■■□□ 2.1
SMARCA2-219ENST00000634287 WRNQ14191 1432 aaPredicted RBP eCLIP28.14■■■□□ 2.1
SMARCA2-219ENST00000634287 TOP2BQ02880 1626 aa28.03■■■□□ 2.08
SMARCA2-219ENST00000634287 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
SMARCA2-219ENST00000634287 GRIN2AQ12879 1464 aa28.01■■■□□ 2.07
SMARCA2-219ENST00000634287 ADAMTS12P58397 1594 aa27.94■■■□□ 2.06
SMARCA2-219ENST00000634287 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
SMARCA2-219ENST00000634287 NUP160Q12769 1436 aa27.91■■■□□ 2.06
SMARCA2-219ENST00000634287 CEP170Q5SW79 1584 aa27.89■■■□□ 2.05
SMARCA2-219ENST00000634287 ERICH3Q5RHP9 1530 aa27.88■■■□□ 2.05
SMARCA2-219ENST00000634287 ERCC6L2Q5T890 1561 aa27.85■■■□□ 2.05
SMARCA2-219ENST00000634287 SHROOM2Q13796 1616 aa27.79■■■□□ 2.04
SMARCA2-219ENST00000634287 JPH4Q96JJ6 628 aa27.71■■■□□ 2.03
SMARCA2-219ENST00000634287 PRG4Q92954 1404 aaPredicted RBP27.68■■■□□ 2.02
SMARCA2-219ENST00000634287 AEBP2Q6ZN18 517 aaPredicted RBP27.57■■■□□ 2
SMARCA2-219ENST00000634287 RUSC2Q8N2Y8 1516 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms