RNA–Protein interactions for RNA: ENST00000633951.1

LINC01002-235, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 4 BASIC

Gene LINC01002, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-235ENST00000633951 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.91
LINC01002-235ENST00000633951 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
LINC01002-235ENST00000633951 ABCC9O60706 1549 aa23.7■■□□□ 1.38
LINC01002-235ENST00000633951 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
LINC01002-235ENST00000633951 NACADO15069 1562 aa22.67■■□□□ 1.22
LINC01002-235ENST00000633951 DCAF8L2P0C7V8 631 aa22.61■■□□□ 1.21
LINC01002-235ENST00000633951 MYO15BQ96JP2 1530 aa22.52■■□□□ 1.2
LINC01002-235ENST00000633951 ZCCHC6Q5VYS8 1495 aaKnown RBP22.37■■□□□ 1.17
LINC01002-235ENST00000633951 DCAF1Q9Y4B6 1507 aa22.32■■□□□ 1.16
LINC01002-235ENST00000633951 PABPN1Q86U42 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
LINC01002-235ENST00000633951 UNC13AQ9UPW8 1703 aa22.1■■□□□ 1.13
LINC01002-235ENST00000633951 DNAJC5BQ9UF47 199 aa22.08■■□□□ 1.13
LINC01002-235ENST00000633951 BICRAQ9NZM4 1560 aa22.05■■□□□ 1.12
LINC01002-235ENST00000633951 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.09
LINC01002-235ENST00000633951 SCRIBQ14160 1630 aa21.82■■□□□ 1.08
LINC01002-235ENST00000633951 EIF4G1Q04637 1599 aaKnown RBP21.47■■□□□ 1.03
LINC01002-235ENST00000633951 CC2D2AQ9P2K1 1620 aa21.43■■□□□ 1.02
LINC01002-235ENST00000633951 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
LINC01002-235ENST00000633951 NCAPD3P42695 1498 aa20.98■□□□□ 0.95
LINC01002-235ENST00000633951 ATAD2BQ9ULI0 1458 aa20.92■□□□□ 0.94
LINC01002-235ENST00000633951 SMARCA4P51532 1647 aa20.9■□□□□ 0.94
LINC01002-235ENST00000633951 BAZ1AQ9NRL2 1556 aaPredicted RBP20.87■□□□□ 0.93
LINC01002-235ENST00000633951 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
LINC01002-235ENST00000633951 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
LINC01002-235ENST00000633951 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
LINC01002-235ENST00000633951 MROH2BQ7Z745 1585 aa20.75■□□□□ 0.91
LINC01002-235ENST00000633951 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
LINC01002-235ENST00000633951 RSF1Q96T23 1441 aaPredicted RBP20.47■□□□□ 0.87
LINC01002-235ENST00000633951 NESP48681 1621 aa20.45■□□□□ 0.87
LINC01002-235ENST00000633951 WIZO95785 1651 aa20.45■□□□□ 0.86
LINC01002-235ENST00000633951 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
LINC01002-235ENST00000633951 LAMC3Q9Y6N6 1575 aa20.38■□□□□ 0.85
LINC01002-235ENST00000633951 CUX2O14529 1486 aa20.36■□□□□ 0.85
LINC01002-235ENST00000633951 CADPSQ9ULU8 1353 aa20.34■□□□□ 0.85
LINC01002-235ENST00000633951 PDS5BQ9NTI5 1447 aa20.3■□□□□ 0.84
LINC01002-235ENST00000633951 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
LINC01002-235ENST00000633951 CFTRP13569 1480 aa20.17■□□□□ 0.82
LINC01002-235ENST00000633951 THOC2Q8NI27 1593 aaKnown RBP20.16■□□□□ 0.82
LINC01002-235ENST00000633951 KIF21AQ7Z4S6 1674 aa20.13■□□□□ 0.81
LINC01002-235ENST00000633951 DNAJC5Q9H3Z4 198 aa20.09■□□□□ 0.81
LINC01002-235ENST00000633951 CCDC88BA6NC98 1476 aa20.07■□□□□ 0.8
LINC01002-235ENST00000633951 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
LINC01002-235ENST00000633951 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
LINC01002-235ENST00000633951 CEP164Q9UPV0 1460 aa20.02■□□□□ 0.8
LINC01002-235ENST00000633951 WDR62O43379 1518 aa19.99■□□□□ 0.79
LINC01002-235ENST00000633951 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
LINC01002-235ENST00000633951 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
LINC01002-235ENST00000633951 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
LINC01002-235ENST00000633951 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
LINC01002-235ENST00000633951 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
LINC01002-235ENST00000633951 IFT140Q96RY7 1462 aa19.65■□□□□ 0.74
LINC01002-235ENST00000633951 DNMBPQ6XZF7 1577 aa19.64■□□□□ 0.73
LINC01002-235ENST00000633951 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
LINC01002-235ENST00000633951 OSCARQ8IYS5 282 aa19.55■□□□□ 0.72
LINC01002-235ENST00000633951 POLA1P09884 1462 aaPredicted RBP19.53■□□□□ 0.72
LINC01002-235ENST00000633951 TARBP1Q13395 1621 aaKnown RBP19.5■□□□□ 0.71
LINC01002-235ENST00000633951 SOGA1O94964 1423 aa19.48■□□□□ 0.71
LINC01002-235ENST00000633951 CUX1P39880 1505 aa19.46■□□□□ 0.71
LINC01002-235ENST00000633951 AQRO60306 1485 aaKnown RBP eCLIP19.45■□□□□ 0.7
LINC01002-235ENST00000633951 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
LINC01002-235ENST00000633951 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
LINC01002-235ENST00000633951 EIF4G3O43432 1585 aaKnown RBP19.4■□□□□ 0.7
LINC01002-235ENST00000633951 TDRD9Q8NDG6 1382 aaKnown RBP19.38■□□□□ 0.69
LINC01002-235ENST00000633951 WDR97A6NE52 1622 aa19.33■□□□□ 0.69
LINC01002-235ENST00000633951 WRNQ14191 1432 aaPredicted RBP eCLIP19.27■□□□□ 0.68
LINC01002-235ENST00000633951 ABCA10Q8WWZ4 1543 aa19.26■□□□□ 0.67
LINC01002-235ENST00000633951 GRIN2BQ13224 1484 aa19.25■□□□□ 0.67
LINC01002-235ENST00000633951 FBLN2P98095 1184 aa19.24■□□□□ 0.67
LINC01002-235ENST00000633951 GAPVD1Q14C86 1478 aa19.22■□□□□ 0.67
LINC01002-235ENST00000633951 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
LINC01002-235ENST00000633951 MAGI1Q96QZ7 1491 aaPredicted RBP19.22■□□□□ 0.67
LINC01002-235ENST00000633951 TRIM41Q8WV44 630 aa19.21■□□□□ 0.67
LINC01002-235ENST00000633951 BIVM-ERCC5R4GMW8 1640 aa19.21■□□□□ 0.67
LINC01002-235ENST00000633951 SNAPC4Q5SXM2 1469 aa19.21■□□□□ 0.67
LINC01002-235ENST00000633951 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
LINC01002-235ENST00000633951 SYNJ1O43426 1573 aa19.18■□□□□ 0.66
LINC01002-235ENST00000633951 CHD1O14646 1710 aa19.17■□□□□ 0.66
LINC01002-235ENST00000633951 SYNJ2O15056 1496 aa19.15■□□□□ 0.66
LINC01002-235ENST00000633951 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.66
LINC01002-235ENST00000633951 RIMBP3CA6NJZ7 1639 aa19.12■□□□□ 0.65
LINC01002-235ENST00000633951 RIMBP3BA6NNM3 1639 aa19.12■□□□□ 0.65
LINC01002-235ENST00000633951 RIMBP3Q9UFD9 1639 aa19.12■□□□□ 0.65
LINC01002-235ENST00000633951 ARHGEF11O15085 1522 aa19.12■□□□□ 0.65
LINC01002-235ENST00000633951 PBRM1Q86U86 1689 aa19.08■□□□□ 0.64
LINC01002-235ENST00000633951 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
LINC01002-235ENST00000633951 CYB5RLQ6IPT4 315 aa19.03■□□□□ 0.64
LINC01002-235ENST00000633951 ERICH3Q5RHP9 1530 aa19.02■□□□□ 0.64
LINC01002-235ENST00000633951 FHAD1B1AJZ9 1412 aa19.01■□□□□ 0.63
LINC01002-235ENST00000633951 GRIN2AQ12879 1464 aa18.98■□□□□ 0.63
LINC01002-235ENST00000633951 ADAMTS12P58397 1594 aa18.96■□□□□ 0.63
LINC01002-235ENST00000633951 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
LINC01002-235ENST00000633951 NUP160Q12769 1436 aa18.95■□□□□ 0.62
LINC01002-235ENST00000633951 IGF1RP08069 1367 aa18.92■□□□□ 0.62
LINC01002-235ENST00000633951 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
LINC01002-235ENST00000633951 CEP170Q5SW79 1584 aa18.87■□□□□ 0.61
LINC01002-235ENST00000633951 JPH4Q96JJ6 628 aa18.81■□□□□ 0.6
LINC01002-235ENST00000633951 SHROOM2Q13796 1616 aa18.78■□□□□ 0.6
LINC01002-235ENST00000633951 CARMIL1Q5VZK9 1371 aa18.76■□□□□ 0.59
LINC01002-235ENST00000633951 ERCC6L2Q5T890 1561 aa18.75■□□□□ 0.59
LINC01002-235ENST00000633951 CUL7Q14999 1698 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms