RNA–Protein interactions for RNA: ENST00000633522.1

LINC01002-229, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5

Gene LINC01002, Length 570 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-229ENST00000633522 NISCHQ9Y2I1 1504 aa29.27■■■□□ 2.28
LINC01002-229ENST00000633522 ABCC9O60706 1549 aa27.59■■■□□ 2.01
LINC01002-229ENST00000633522 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
LINC01002-229ENST00000633522 CCDC180Q9P1Z9 1646 aa26.77■■□□□ 1.88
LINC01002-229ENST00000633522 RB1CC1Q8TDY2 1594 aa25.86■■□□□ 1.73
LINC01002-229ENST00000633522 UNC13AQ9UPW8 1703 aa25.5■■□□□ 1.67
LINC01002-229ENST00000633522 NACADO15069 1562 aa25.47■■□□□ 1.67
LINC01002-229ENST00000633522 PABPN1Q86U42 306 aaKnown RBP eCLIP25.46■■□□□ 1.67
LINC01002-229ENST00000633522 DNAJC5Q9H3Z4 198 aa25.33■■□□□ 1.65
LINC01002-229ENST00000633522 BICRAQ9NZM4 1560 aa25.32■■□□□ 1.64
LINC01002-229ENST00000633522 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
LINC01002-229ENST00000633522 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
LINC01002-229ENST00000633522 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
LINC01002-229ENST00000633522 DCAF8L2P0C7V8 631 aa24.78■■□□□ 1.56
LINC01002-229ENST00000633522 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
LINC01002-229ENST00000633522 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
LINC01002-229ENST00000633522 CUX2O14529 1486 aa24.24■■□□□ 1.47
LINC01002-229ENST00000633522 SCRIBQ14160 1630 aa24.22■■□□□ 1.47
LINC01002-229ENST00000633522 DCAF1Q9Y4B6 1507 aa24.17■■□□□ 1.46
LINC01002-229ENST00000633522 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
LINC01002-229ENST00000633522 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
LINC01002-229ENST00000633522 TRIM41Q8WV44 630 aa23.63■■□□□ 1.37
LINC01002-229ENST00000633522 NCAPD3P42695 1498 aa23.55■■□□□ 1.36
LINC01002-229ENST00000633522 THOC2Q8NI27 1593 aaKnown RBP23.54■■□□□ 1.36
LINC01002-229ENST00000633522 NESP48681 1621 aa23.49■■□□□ 1.35
LINC01002-229ENST00000633522 ATAD2BQ9ULI0 1458 aa23.31■■□□□ 1.32
LINC01002-229ENST00000633522 HMGXB3Q12766 1538 aa23.29■■□□□ 1.32
LINC01002-229ENST00000633522 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
LINC01002-229ENST00000633522 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
LINC01002-229ENST00000633522 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
LINC01002-229ENST00000633522 SMARCA4P51532 1647 aa23.08■■□□□ 1.28
LINC01002-229ENST00000633522 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
LINC01002-229ENST00000633522 BAZ1BQ9UIG0 1483 aaKnown RBP22.95■■□□□ 1.26
LINC01002-229ENST00000633522 PDS5BQ9NTI5 1447 aa22.94■■□□□ 1.26
LINC01002-229ENST00000633522 WDR62O43379 1518 aa22.93■■□□□ 1.26
LINC01002-229ENST00000633522 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
LINC01002-229ENST00000633522 MRC2Q9UBG0 1479 aa22.87■■□□□ 1.25
LINC01002-229ENST00000633522 RIMBP3CA6NJZ7 1639 aa22.82■■□□□ 1.24
LINC01002-229ENST00000633522 RIMBP3BA6NNM3 1639 aa22.82■■□□□ 1.24
LINC01002-229ENST00000633522 RIMBP3Q9UFD9 1639 aa22.82■■□□□ 1.24
LINC01002-229ENST00000633522 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
LINC01002-229ENST00000633522 CADPSQ9ULU8 1353 aa22.7■■□□□ 1.22
LINC01002-229ENST00000633522 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
LINC01002-229ENST00000633522 MROH2BQ7Z745 1585 aa22.55■■□□□ 1.2
LINC01002-229ENST00000633522 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
LINC01002-229ENST00000633522 FANCD2Q9BXW9 1451 aa22.45■■□□□ 1.18
LINC01002-229ENST00000633522 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
LINC01002-229ENST00000633522 AEBP2Q6ZN18 517 aaPredicted RBP22.35■■□□□ 1.17
LINC01002-229ENST00000633522 ARAP1Q96P48 1450 aa22.34■■□□□ 1.17
LINC01002-229ENST00000633522 CYB5RLQ6IPT4 315 aa22.33■■□□□ 1.17
LINC01002-229ENST00000633522 TRHP20396 242 aaPredicted RBP22.31■■□□□ 1.16
LINC01002-229ENST00000633522 CFTRP13569 1480 aa22.3■■□□□ 1.16
LINC01002-229ENST00000633522 ZNF608Q9ULD9 1512 aaPredicted RBP22.28■■□□□ 1.16
LINC01002-229ENST00000633522 WIZO95785 1651 aa22.24■■□□□ 1.15
LINC01002-229ENST00000633522 CHD1O14646 1710 aa22.19■■□□□ 1.14
LINC01002-229ENST00000633522 IFT140Q96RY7 1462 aa22.15■■□□□ 1.14
LINC01002-229ENST00000633522 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
LINC01002-229ENST00000633522 RSF1Q96T23 1441 aaPredicted RBP22.12■■□□□ 1.13
LINC01002-229ENST00000633522 PRDM2Q13029 1718 aa22.11■■□□□ 1.13
LINC01002-229ENST00000633522 TOPBP1Q92547 1522 aa21.96■■□□□ 1.11
LINC01002-229ENST00000633522 TARBP1Q13395 1621 aaKnown RBP21.94■■□□□ 1.1
LINC01002-229ENST00000633522 CLASP1Q7Z460 1538 aa21.91■■□□□ 1.1
LINC01002-229ENST00000633522 AQRO60306 1485 aaKnown RBP eCLIP21.89■■□□□ 1.09
LINC01002-229ENST00000633522 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
LINC01002-229ENST00000633522 DNMBPQ6XZF7 1577 aa21.79■■□□□ 1.08
LINC01002-229ENST00000633522 ABCC8Q09428 1581 aa21.76■■□□□ 1.07
LINC01002-229ENST00000633522 ILDR1Q86SU0 546 aaPredicted RBP21.74■■□□□ 1.07
LINC01002-229ENST00000633522 FBLN2P98095 1184 aa21.73■■□□□ 1.07
LINC01002-229ENST00000633522 POLA1P09884 1462 aaPredicted RBP21.68■■□□□ 1.06
LINC01002-229ENST00000633522 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
LINC01002-229ENST00000633522 GAPVD1Q14C86 1478 aa21.64■■□□□ 1.05
LINC01002-229ENST00000633522 SNAPC4Q5SXM2 1469 aa21.64■■□□□ 1.05
LINC01002-229ENST00000633522 KIF13AQ9H1H9 1805 aa21.62■■□□□ 1.05
LINC01002-229ENST00000633522 CCDC88BA6NC98 1476 aa21.6■■□□□ 1.05
LINC01002-229ENST00000633522 WDR97A6NE52 1622 aa21.58■■□□□ 1.05
LINC01002-229ENST00000633522 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
LINC01002-229ENST00000633522 TDRD9Q8NDG6 1382 aaKnown RBP21.55■■□□□ 1.04
LINC01002-229ENST00000633522 MAGI1Q96QZ7 1491 aaPredicted RBP21.55■■□□□ 1.04
LINC01002-229ENST00000633522 ERCC6L2Q5T890 1561 aa21.5■■□□□ 1.03
LINC01002-229ENST00000633522 SYNJ2O15056 1496 aa21.5■■□□□ 1.03
LINC01002-229ENST00000633522 CHMP7Q8WUX9 453 aaPredicted RBP21.46■■□□□ 1.03
LINC01002-229ENST00000633522 SOGA1O94964 1423 aa21.46■■□□□ 1.03
LINC01002-229ENST00000633522 KDM4FA0A1W2PPD8 638 aa21.44■■□□□ 1.02
LINC01002-229ENST00000633522 GRIN2BQ13224 1484 aa21.42■■□□□ 1.02
LINC01002-229ENST00000633522 PBRM1Q86U86 1689 aa21.39■■□□□ 1.01
LINC01002-229ENST00000633522 FGD5Q6ZNL6 1462 aa21.36■■□□□ 1.01
LINC01002-229ENST00000633522 CEP170Q5SW79 1584 aa21.31■■□□□ 1
LINC01002-229ENST00000633522 SHROOM2Q13796 1616 aa21.29■■□□□ 1
LINC01002-229ENST00000633522 CUX1P39880 1505 aa21.24■□□□□ 0.99
LINC01002-229ENST00000633522 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
LINC01002-229ENST00000633522 ABCC10Q5T3U5 1492 aa21.21■□□□□ 0.99
LINC01002-229ENST00000633522 NUP160Q12769 1436 aa21.2■□□□□ 0.98
LINC01002-229ENST00000633522 DIP2BQ9P265 1576 aa21.19■□□□□ 0.98
LINC01002-229ENST00000633522 GRIN2AQ12879 1464 aa21.19■□□□□ 0.98
LINC01002-229ENST00000633522 KDM6BO15054 1643 aa21.18■□□□□ 0.98
LINC01002-229ENST00000633522 MAPKBP1O60336 1514 aa21.13■□□□□ 0.97
LINC01002-229ENST00000633522 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
LINC01002-229ENST00000633522 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
LINC01002-229ENST00000633522 HECW2Q9P2P5 1572 aa21.09■□□□□ 0.97
LINC01002-229ENST00000633522 FAM69CQ0P6D2 419 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms