RNA–Protein interactions for RNA: ENST00000633402.1

LINC01002-228, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5 BASIC

Gene LINC01002, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-228ENST00000633402 NISCHQ9Y2I1 1504 aa22.6■■□□□ 1.21
LINC01002-228ENST00000633402 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
LINC01002-228ENST00000633402 ABCC9O60706 1549 aa20.23■□□□□ 0.83
LINC01002-228ENST00000633402 RB1CC1Q8TDY2 1594 aa19.31■□□□□ 0.68
LINC01002-228ENST00000633402 NACADO15069 1562 aa19.2■□□□□ 0.66
LINC01002-228ENST00000633402 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
LINC01002-228ENST00000633402 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
LINC01002-228ENST00000633402 UNC13AQ9UPW8 1703 aa18.96■□□□□ 0.63
LINC01002-228ENST00000633402 BICRAQ9NZM4 1560 aa18.84■□□□□ 0.61
LINC01002-228ENST00000633402 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
LINC01002-228ENST00000633402 PABPN1Q86U42 306 aaKnown RBP eCLIP18.77■□□□□ 0.6
LINC01002-228ENST00000633402 ZCCHC6Q5VYS8 1495 aaKnown RBP18.75■□□□□ 0.59
LINC01002-228ENST00000633402 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
LINC01002-228ENST00000633402 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.56
LINC01002-228ENST00000633402 SCRIBQ14160 1630 aa18.41■□□□□ 0.54
LINC01002-228ENST00000633402 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
LINC01002-228ENST00000633402 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
LINC01002-228ENST00000633402 CECR2Q9BXF3 1484 aa18.25■□□□□ 0.51
LINC01002-228ENST00000633402 NCAPD3P42695 1498 aa17.74■□□□□ 0.43
LINC01002-228ENST00000633402 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
LINC01002-228ENST00000633402 SMARCA4P51532 1647 aa17.65■□□□□ 0.42
LINC01002-228ENST00000633402 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
LINC01002-228ENST00000633402 SMARCA2P51531 1590 aa17.59■□□□□ 0.41
LINC01002-228ENST00000633402 PEG3Q9GZU2 1588 aa17.55■□□□□ 0.4
LINC01002-228ENST00000633402 BAZ1AQ9NRL2 1556 aaPredicted RBP17.53■□□□□ 0.4
LINC01002-228ENST00000633402 CUX2O14529 1486 aa17.51■□□□□ 0.39
LINC01002-228ENST00000633402 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
LINC01002-228ENST00000633402 BAZ1BQ9UIG0 1483 aaKnown RBP17.43■□□□□ 0.38
LINC01002-228ENST00000633402 ERCC6Q03468 1493 aa17.42■□□□□ 0.38
LINC01002-228ENST00000633402 NESP48681 1621 aa17.41■□□□□ 0.38
LINC01002-228ENST00000633402 MROH2BQ7Z745 1585 aa17.4■□□□□ 0.38
LINC01002-228ENST00000633402 LAMC3Q9Y6N6 1575 aa17.33■□□□□ 0.37
LINC01002-228ENST00000633402 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
LINC01002-228ENST00000633402 KIF21AQ7Z4S6 1674 aa17.23■□□□□ 0.35
LINC01002-228ENST00000633402 WIZO95785 1651 aa17.18■□□□□ 0.34
LINC01002-228ENST00000633402 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
LINC01002-228ENST00000633402 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
LINC01002-228ENST00000633402 WDR62O43379 1518 aa17.06■□□□□ 0.32
LINC01002-228ENST00000633402 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
LINC01002-228ENST00000633402 RSF1Q96T23 1441 aaPredicted RBP17.03■□□□□ 0.32
LINC01002-228ENST00000633402 CFTRP13569 1480 aa16.99■□□□□ 0.31
LINC01002-228ENST00000633402 TOP2AP11388 1531 aaKnown RBP16.98■□□□□ 0.31
LINC01002-228ENST00000633402 CEP164Q9UPV0 1460 aa16.95■□□□□ 0.3
LINC01002-228ENST00000633402 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
LINC01002-228ENST00000633402 PRDM2Q13029 1718 aa16.86■□□□□ 0.29
LINC01002-228ENST00000633402 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
LINC01002-228ENST00000633402 CCDC88BA6NC98 1476 aa16.76■□□□□ 0.27
LINC01002-228ENST00000633402 TOPBP1Q92547 1522 aa16.64■□□□□ 0.25
LINC01002-228ENST00000633402 IFT140Q96RY7 1462 aa16.62■□□□□ 0.25
LINC01002-228ENST00000633402 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
LINC01002-228ENST00000633402 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
LINC01002-228ENST00000633402 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
LINC01002-228ENST00000633402 DNMBPQ6XZF7 1577 aa16.59■□□□□ 0.25
LINC01002-228ENST00000633402 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
LINC01002-228ENST00000633402 TARBP1Q13395 1621 aaKnown RBP16.56■□□□□ 0.24
LINC01002-228ENST00000633402 EIF4G3O43432 1585 aaKnown RBP16.54■□□□□ 0.24
LINC01002-228ENST00000633402 RIMBP3CA6NJZ7 1639 aa16.48■□□□□ 0.23
LINC01002-228ENST00000633402 RIMBP3BA6NNM3 1639 aa16.48■□□□□ 0.23
LINC01002-228ENST00000633402 RIMBP3Q9UFD9 1639 aa16.48■□□□□ 0.23
LINC01002-228ENST00000633402 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
LINC01002-228ENST00000633402 ARHGEF11O15085 1522 aa16.43■□□□□ 0.22
LINC01002-228ENST00000633402 CHD1O14646 1710 aa16.42■□□□□ 0.22
LINC01002-228ENST00000633402 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.22
LINC01002-228ENST00000633402 WDR97A6NE52 1622 aa16.38■□□□□ 0.21
LINC01002-228ENST00000633402 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
LINC01002-228ENST00000633402 CUX1P39880 1505 aa16.35■□□□□ 0.21
LINC01002-228ENST00000633402 SOGA1O94964 1423 aa16.34■□□□□ 0.21
LINC01002-228ENST00000633402 FGD5Q6ZNL6 1462 aa16.34■□□□□ 0.21
LINC01002-228ENST00000633402 TDRD9Q8NDG6 1382 aaKnown RBP16.29■□□□□ 0.2
LINC01002-228ENST00000633402 CLASP1Q7Z460 1538 aa16.28■□□□□ 0.2
LINC01002-228ENST00000633402 ARAP1Q96P48 1450 aa16.27■□□□□ 0.19
LINC01002-228ENST00000633402 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
LINC01002-228ENST00000633402 MAGI1Q96QZ7 1491 aaPredicted RBP16.25■□□□□ 0.19
LINC01002-228ENST00000633402 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
LINC01002-228ENST00000633402 PBRM1Q86U86 1689 aa16.21■□□□□ 0.18
LINC01002-228ENST00000633402 ABCA5Q8WWZ7 1642 aa16.2■□□□□ 0.18
LINC01002-228ENST00000633402 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
LINC01002-228ENST00000633402 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
LINC01002-228ENST00000633402 SYNJ1O43426 1573 aa16.18■□□□□ 0.18
LINC01002-228ENST00000633402 CYB5RLQ6IPT4 315 aa16.18■□□□□ 0.18
LINC01002-228ENST00000633402 FBLN2P98095 1184 aa16.17■□□□□ 0.18
LINC01002-228ENST00000633402 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
LINC01002-228ENST00000633402 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
LINC01002-228ENST00000633402 TOP2BQ02880 1626 aa16.1■□□□□ 0.17
LINC01002-228ENST00000633402 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
LINC01002-228ENST00000633402 ADAMTS12P58397 1594 aa16.05■□□□□ 0.16
LINC01002-228ENST00000633402 WRNQ14191 1432 aaPredicted RBP eCLIP16.05■□□□□ 0.16
LINC01002-228ENST00000633402 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
LINC01002-228ENST00000633402 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
LINC01002-228ENST00000633402 NUP160Q12769 1436 aa16.02■□□□□ 0.16
LINC01002-228ENST00000633402 CEP170Q5SW79 1584 aa16■□□□□ 0.15
LINC01002-228ENST00000633402 SHROOM2Q13796 1616 aa16■□□□□ 0.15
LINC01002-228ENST00000633402 ERICH3Q5RHP9 1530 aa15.99■□□□□ 0.15
LINC01002-228ENST00000633402 ERCC6L2Q5T890 1561 aa15.98■□□□□ 0.15
LINC01002-228ENST00000633402 FHAD1B1AJZ9 1412 aa15.96■□□□□ 0.15
LINC01002-228ENST00000633402 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
LINC01002-228ENST00000633402 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
LINC01002-228ENST00000633402 PRG4Q92954 1404 aaPredicted RBP15.77■□□□□ 0.12
LINC01002-228ENST00000633402 KIF13AQ9H1H9 1805 aa15.77■□□□□ 0.11
LINC01002-228ENST00000633402 JPH4Q96JJ6 628 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms