RNA–Protein interactions for RNA: ENST00000632351.1

LINC01002-216, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5 BASIC

Gene LINC01002, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-216ENST00000632351 NISCHQ9Y2I1 1504 aa19.73■□□□□ 0.75
LINC01002-216ENST00000632351 AEBP2Q6ZN18 517 aaPredicted RBP18.24■□□□□ 0.51
LINC01002-216ENST00000632351 CHIC1Q5VXU3 224 aa17.58■□□□□ 0.4
LINC01002-216ENST00000632351 CCDC180Q9P1Z9 1646 aa17.54■□□□□ 0.4
LINC01002-216ENST00000632351 ABCC9O60706 1549 aa17.07■□□□□ 0.32
LINC01002-216ENST00000632351 DCAF8L2P0C7V8 631 aa16.59■□□□□ 0.25
LINC01002-216ENST00000632351 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
LINC01002-216ENST00000632351 NACADO15069 1562 aa16.48■□□□□ 0.23
LINC01002-216ENST00000632351 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
LINC01002-216ENST00000632351 MYO15BQ96JP2 1530 aa16.38■□□□□ 0.21
LINC01002-216ENST00000632351 DCAF1Q9Y4B6 1507 aa16.33■□□□□ 0.2
LINC01002-216ENST00000632351 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.17
LINC01002-216ENST00000632351 SCRIBQ14160 1630 aa15.99■□□□□ 0.15
LINC01002-216ENST00000632351 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
LINC01002-216ENST00000632351 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
LINC01002-216ENST00000632351 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
LINC01002-216ENST00000632351 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
LINC01002-216ENST00000632351 SENP3Q9H4L4 574 aaPredicted RBP15.55■□□□□ 0.08
LINC01002-216ENST00000632351 PHF23Q9BUL5 403 aaPredicted RBP15.53■□□□□ 0.08
LINC01002-216ENST00000632351 EIF4G1Q04637 1599 aaKnown RBP15.52■□□□□ 0.07
LINC01002-216ENST00000632351 CC2D2AQ9P2K1 1620 aa15.45■□□□□ 0.06
LINC01002-216ENST00000632351 CECR2Q9BXF3 1484 aa15.34■□□□□ 0.05
LINC01002-216ENST00000632351 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
LINC01002-216ENST00000632351 SMARCA4P51532 1647 aa15.3■□□□□ 0.04
LINC01002-216ENST00000632351 SMARCA2P51531 1590 aa15.23■□□□□ 0.03
LINC01002-216ENST00000632351 ATAD2BQ9ULI0 1458 aa15.19■□□□□ 0.02
LINC01002-216ENST00000632351 NCAPD3P42695 1498 aa15.18■□□□□ 0.02
LINC01002-216ENST00000632351 MROH2BQ7Z745 1585 aa15.18■□□□□ 0.02
LINC01002-216ENST00000632351 PEG3Q9GZU2 1588 aa15.13■□□□□ 0.01
LINC01002-216ENST00000632351 BAZ1BQ9UIG0 1483 aaKnown RBP15.11■□□□□ 0.01
LINC01002-216ENST00000632351 HMGXB3Q12766 1538 aa15.11■□□□□ 0.01
LINC01002-216ENST00000632351 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ -0
LINC01002-216ENST00000632351 WIZO95785 1651 aa15.05■□□□□ -0
LINC01002-216ENST00000632351 TOP2AP11388 1531 aaKnown RBP14.9□□□□□ -0.02
LINC01002-216ENST00000632351 SUPT5HO00267 1087 aaKnown RBP14.82□□□□□ -0.04
LINC01002-216ENST00000632351 LAMC3Q9Y6N6 1575 aa14.8□□□□□ -0.04
LINC01002-216ENST00000632351 ERCC6Q03468 1493 aa14.77□□□□□ -0.04
LINC01002-216ENST00000632351 NESP48681 1621 aa14.76□□□□□ -0.05
LINC01002-216ENST00000632351 CADPSQ9ULU8 1353 aa14.75□□□□□ -0.05
LINC01002-216ENST00000632351 CCDC88BA6NC98 1476 aa14.73□□□□□ -0.05
LINC01002-216ENST00000632351 PDS5BQ9NTI5 1447 aa14.73□□□□□ -0.05
LINC01002-216ENST00000632351 CFTRP13569 1480 aa14.66□□□□□ -0.06
LINC01002-216ENST00000632351 KIF21AQ7Z4S6 1674 aa14.63□□□□□ -0.07
LINC01002-216ENST00000632351 PRDM2Q13029 1718 aa14.62□□□□□ -0.07
LINC01002-216ENST00000632351 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
LINC01002-216ENST00000632351 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
LINC01002-216ENST00000632351 FOXD1Q16676 465 aa14.54□□□□□ -0.08
LINC01002-216ENST00000632351 CUX2O14529 1486 aa14.54□□□□□ -0.08
LINC01002-216ENST00000632351 MRC2Q9UBG0 1479 aa14.52□□□□□ -0.08
LINC01002-216ENST00000632351 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
LINC01002-216ENST00000632351 DNAJC5Q9H3Z4 198 aa14.47□□□□□ -0.09
LINC01002-216ENST00000632351 WDR62O43379 1518 aa14.45□□□□□ -0.1
LINC01002-216ENST00000632351 ABCC8Q09428 1581 aa14.43□□□□□ -0.1
LINC01002-216ENST00000632351 URB2Q14146 1524 aaKnown RBP14.4□□□□□ -0.1
LINC01002-216ENST00000632351 DNMBPQ6XZF7 1577 aa14.35□□□□□ -0.11
LINC01002-216ENST00000632351 TOPBP1Q92547 1522 aa14.35□□□□□ -0.11
LINC01002-216ENST00000632351 IFT140Q96RY7 1462 aa14.26□□□□□ -0.13
LINC01002-216ENST00000632351 CUX1P39880 1505 aa14.25□□□□□ -0.13
LINC01002-216ENST00000632351 WRNQ14191 1432 aaPredicted RBP eCLIP14.23□□□□□ -0.13
LINC01002-216ENST00000632351 POLA1P09884 1462 aaPredicted RBP14.22□□□□□ -0.13
LINC01002-216ENST00000632351 SOGA1O94964 1423 aa14.22□□□□□ -0.13
LINC01002-216ENST00000632351 FGD5Q6ZNL6 1462 aa14.21□□□□□ -0.13
LINC01002-216ENST00000632351 PLPPR3Q6T4P5 718 aa14.19□□□□□ -0.14
LINC01002-216ENST00000632351 TOP2BQ02880 1626 aa14.18□□□□□ -0.14
LINC01002-216ENST00000632351 TARBP1Q13395 1621 aaKnown RBP14.17□□□□□ -0.14
LINC01002-216ENST00000632351 BIVM-ERCC5R4GMW8 1640 aa14.17□□□□□ -0.14
LINC01002-216ENST00000632351 RAD54L2Q9Y4B4 1467 aa14.15□□□□□ -0.14
LINC01002-216ENST00000632351 SYNJ1O43426 1573 aa14.14□□□□□ -0.15
LINC01002-216ENST00000632351 ZNF608Q9ULD9 1512 aaPredicted RBP14.14□□□□□ -0.15
LINC01002-216ENST00000632351 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
LINC01002-216ENST00000632351 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
LINC01002-216ENST00000632351 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.15
LINC01002-216ENST00000632351 TDRD9Q8NDG6 1382 aaKnown RBP14.1□□□□□ -0.15
LINC01002-216ENST00000632351 ABCA10Q8WWZ4 1543 aa14.07□□□□□ -0.16
LINC01002-216ENST00000632351 GAPVD1Q14C86 1478 aa14.04□□□□□ -0.16
LINC01002-216ENST00000632351 TRIM41Q8WV44 630 aa14.03□□□□□ -0.16
LINC01002-216ENST00000632351 GRIN2BQ13224 1484 aa14.03□□□□□ -0.16
LINC01002-216ENST00000632351 FBLN2P98095 1184 aa14.02□□□□□ -0.17
LINC01002-216ENST00000632351 OSCARQ8IYS5 282 aa14.02□□□□□ -0.17
LINC01002-216ENST00000632351 PBRM1Q86U86 1689 aa14.01□□□□□ -0.17
LINC01002-216ENST00000632351 POTEDQ86YR6 584 aa14□□□□□ -0.17
LINC01002-216ENST00000632351 ABCA5Q8WWZ7 1642 aa14□□□□□ -0.17
LINC01002-216ENST00000632351 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
LINC01002-216ENST00000632351 CHMP7Q8WUX9 453 aaPredicted RBP13.98□□□□□ -0.17
LINC01002-216ENST00000632351 SNAPC4Q5SXM2 1469 aa13.97□□□□□ -0.17
LINC01002-216ENST00000632351 KIF27Q86VH2 1401 aa13.96□□□□□ -0.18
LINC01002-216ENST00000632351 CHD1O14646 1710 aa13.95□□□□□ -0.18
LINC01002-216ENST00000632351 ERICH3Q5RHP9 1530 aa13.93□□□□□ -0.18
LINC01002-216ENST00000632351 SYNJ2O15056 1496 aa13.93□□□□□ -0.18
LINC01002-216ENST00000632351 FHAD1B1AJZ9 1412 aa13.88□□□□□ -0.19
LINC01002-216ENST00000632351 ADAMTS12P58397 1594 aa13.85□□□□□ -0.19
LINC01002-216ENST00000632351 IGF1RP08069 1367 aa13.84□□□□□ -0.19
LINC01002-216ENST00000632351 CUL7Q14999 1698 aa13.84□□□□□ -0.19
LINC01002-216ENST00000632351 GRIN2AQ12879 1464 aa13.83□□□□□ -0.2
LINC01002-216ENST00000632351 CARMIL1Q5VZK9 1371 aa13.8□□□□□ -0.2
LINC01002-216ENST00000632351 ADRA2BP18089 450 aa13.78□□□□□ -0.2
LINC01002-216ENST00000632351 PPP6R1Q9UPN7 881 aa13.77□□□□□ -0.21
LINC01002-216ENST00000632351 RUSC2Q8N2Y8 1516 aa13.76□□□□□ -0.21
LINC01002-216ENST00000632351 RIMBP3CA6NJZ7 1639 aa13.75□□□□□ -0.21
LINC01002-216ENST00000632351 RIMBP3BA6NNM3 1639 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms