RNA–Protein interactions for RNA: ENST00000632169.1

HACD1-206, Transcript of 3-hydroxyacyl-CoA dehydratase 1, humanhuman

TSL 1 (best)

Gene HACD1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD1-206ENST00000632169 NISCHQ9Y2I1 1504 aa53.14■■■■■ 6.1
HACD1-206ENST00000632169 CCDC180Q9P1Z9 1646 aa47.38■■■■■ 5.18
HACD1-206ENST00000632169 ABCC9O60706 1549 aa46.84■■■■■ 5.09
HACD1-206ENST00000632169 RB1CC1Q8TDY2 1594 aa44.81■■■■■ 4.76
HACD1-206ENST00000632169 NACADO15069 1562 aa44.66■■■■■ 4.74
HACD1-206ENST00000632169 DCAF8L2P0C7V8 631 aa44.58■■■■■ 4.73
HACD1-206ENST00000632169 MYO15BQ96JP2 1530 aa44.25■■■■■ 4.67
HACD1-206ENST00000632169 ZCCHC6Q5VYS8 1495 aaKnown RBP44.17■■■■■ 4.66
HACD1-206ENST00000632169 DCAF1Q9Y4B6 1507 aa43.91■■■■■ 4.62
HACD1-206ENST00000632169 UNC13AQ9UPW8 1703 aa43.84■■■■■ 4.61
HACD1-206ENST00000632169 PABPN1Q86U42 306 aaKnown RBP eCLIP43.72■■■■■ 4.59
HACD1-206ENST00000632169 BICRAQ9NZM4 1560 aa43.55■■■■■ 4.56
HACD1-206ENST00000632169 DNAJC5BQ9UF47 199 aa43.46■■■■■ 4.55
HACD1-206ENST00000632169 SCRIBQ14160 1630 aa43.24■■■■■ 4.51
HACD1-206ENST00000632169 SHROOM4Q9ULL8 1493 aa42.94■■■■■ 4.46
HACD1-206ENST00000632169 EIF4G1Q04637 1599 aaKnown RBP42.39■■■■■ 4.38
HACD1-206ENST00000632169 CC2D2AQ9P2K1 1620 aa42.33■■■■■ 4.37
HACD1-206ENST00000632169 CECR2Q9BXF3 1484 aa42.11■■■■■ 4.33
HACD1-206ENST00000632169 SMARCA4P51532 1647 aa41.32■■■■■ 4.21
HACD1-206ENST00000632169 NCAPD3P42695 1498 aa41.25■■■■■ 4.19
HACD1-206ENST00000632169 ATAD2BQ9ULI0 1458 aa41.22■■■■■ 4.19
HACD1-206ENST00000632169 BAZ1AQ9NRL2 1556 aaPredicted RBP41.18■■■■■ 4.18
HACD1-206ENST00000632169 SMARCA2P51531 1590 aa41.1■■■■■ 4.17
HACD1-206ENST00000632169 MROH2BQ7Z745 1585 aa40.98■■■■■ 4.15
HACD1-206ENST00000632169 HMGXB3Q12766 1538 aa40.98■■■■■ 4.15
HACD1-206ENST00000632169 PEG3Q9GZU2 1588 aa40.91■■■■■ 4.14
HACD1-206ENST00000632169 BAZ1BQ9UIG0 1483 aaKnown RBP40.82■■■■■ 4.13
HACD1-206ENST00000632169 WIZO95785 1651 aa40.5■■■■■ 4.07
HACD1-206ENST00000632169 NESP48681 1621 aa40.44■■■■■ 4.06
HACD1-206ENST00000632169 ERCC6Q03468 1493 aa40.35■■■■■ 4.05
HACD1-206ENST00000632169 RSF1Q96T23 1441 aaPredicted RBP40.35■■■■■ 4.05
HACD1-206ENST00000632169 LAMC3Q9Y6N6 1575 aa40.19■■■■■ 4.02
HACD1-206ENST00000632169 CUX2O14529 1486 aa40.08■■■■■ 4.01
HACD1-206ENST00000632169 CADPSQ9ULU8 1353 aa40.01■■■■■ 4
HACD1-206ENST00000632169 TOP2AP11388 1531 aaKnown RBP40.01■■■■■ 4
HACD1-206ENST00000632169 PDS5BQ9NTI5 1447 aa39.93■■■■□ 3.98
HACD1-206ENST00000632169 KIF21AQ7Z4S6 1674 aa39.9■■■■□ 3.98
HACD1-206ENST00000632169 THOC2Q8NI27 1593 aaKnown RBP39.88■■■■□ 3.97
HACD1-206ENST00000632169 CFTRP13569 1480 aa39.7■■■■□ 3.95
HACD1-206ENST00000632169 CCDC88BA6NC98 1476 aa39.58■■■■□ 3.93
HACD1-206ENST00000632169 MRC2Q9UBG0 1479 aa39.57■■■■□ 3.92
HACD1-206ENST00000632169 FANCD2Q9BXW9 1451 aa39.56■■■■□ 3.92
HACD1-206ENST00000632169 CEP164Q9UPV0 1460 aa39.53■■■■□ 3.92
HACD1-206ENST00000632169 WDR62O43379 1518 aa39.46■■■■□ 3.91
HACD1-206ENST00000632169 DNAJC5Q9H3Z4 198 aa39.4■■■■□ 3.9
HACD1-206ENST00000632169 PRDM2Q13029 1718 aa39.31■■■■□ 3.88
HACD1-206ENST00000632169 URB2Q14146 1524 aaKnown RBP39.23■■■■□ 3.87
HACD1-206ENST00000632169 SUPT5HO00267 1087 aaKnown RBP39■■■■□ 3.83
HACD1-206ENST00000632169 TOPBP1Q92547 1522 aa38.89■■■■□ 3.82
HACD1-206ENST00000632169 ABCC8Q09428 1581 aa38.8■■■■□ 3.8
HACD1-206ENST00000632169 DNMBPQ6XZF7 1577 aa38.79■■■■□ 3.8
HACD1-206ENST00000632169 IFT140Q96RY7 1462 aa38.72■■■■□ 3.79
HACD1-206ENST00000632169 ZNF608Q9ULD9 1512 aaPredicted RBP38.64■■■■□ 3.78
HACD1-206ENST00000632169 POLA1P09884 1462 aaPredicted RBP38.53■■■■□ 3.76
HACD1-206ENST00000632169 TARBP1Q13395 1621 aaKnown RBP38.51■■■■□ 3.75
HACD1-206ENST00000632169 CUX1P39880 1505 aa38.47■■■■□ 3.75
HACD1-206ENST00000632169 EIF4G3O43432 1585 aaKnown RBP38.43■■■■□ 3.74
HACD1-206ENST00000632169 RAD54L2Q9Y4B4 1467 aa38.4■■■■□ 3.74
HACD1-206ENST00000632169 FGD5Q6ZNL6 1462 aa38.38■■■■□ 3.73
HACD1-206ENST00000632169 SOGA1O94964 1423 aa38.36■■■■□ 3.73
HACD1-206ENST00000632169 AQRO60306 1485 aaKnown RBP eCLIP38.36■■■■□ 3.73
HACD1-206ENST00000632169 OSCARQ8IYS5 282 aa38.36■■■■□ 3.73
HACD1-206ENST00000632169 TDRD9Q8NDG6 1382 aaKnown RBP38.22■■■■□ 3.71
HACD1-206ENST00000632169 WDR97A6NE52 1622 aa38.1■■■■□ 3.69
HACD1-206ENST00000632169 CHD1O14646 1710 aa38.03■■■■□ 3.68
HACD1-206ENST00000632169 WRNQ14191 1432 aaPredicted RBP eCLIP38.02■■■■□ 3.68
HACD1-206ENST00000632169 SYNJ1O43426 1573 aa37.98■■■■□ 3.67
HACD1-206ENST00000632169 TOP2BQ02880 1626 aa37.98■■■■□ 3.67
HACD1-206ENST00000632169 BIVM-ERCC5R4GMW8 1640 aa37.98■■■■□ 3.67
HACD1-206ENST00000632169 SNAPC4Q5SXM2 1469 aa37.97■■■■□ 3.67
HACD1-206ENST00000632169 ABCA10Q8WWZ4 1543 aa37.97■■■■□ 3.67
HACD1-206ENST00000632169 FBLN2P98095 1184 aa37.95■■■■□ 3.67
HACD1-206ENST00000632169 GRIN2BQ13224 1484 aa37.94■■■■□ 3.66
HACD1-206ENST00000632169 TRIM41Q8WV44 630 aa37.92■■■■□ 3.66
HACD1-206ENST00000632169 GAPVD1Q14C86 1478 aa37.91■■■■□ 3.66
HACD1-206ENST00000632169 MAGI1Q96QZ7 1491 aaPredicted RBP37.87■■■■□ 3.65
HACD1-206ENST00000632169 ABCA5Q8WWZ7 1642 aa37.87■■■■□ 3.65
HACD1-206ENST00000632169 PBRM1Q86U86 1689 aa37.84■■■■□ 3.65
HACD1-206ENST00000632169 RIMBP3CA6NJZ7 1639 aa37.81■■■■□ 3.64
HACD1-206ENST00000632169 RIMBP3BA6NNM3 1639 aa37.81■■■■□ 3.64
HACD1-206ENST00000632169 RIMBP3Q9UFD9 1639 aa37.81■■■■□ 3.64
HACD1-206ENST00000632169 CHMP7Q8WUX9 453 aaPredicted RBP37.77■■■■□ 3.64
HACD1-206ENST00000632169 ARHGEF11O15085 1522 aa37.75■■■■□ 3.63
HACD1-206ENST00000632169 SYNJ2O15056 1496 aa37.75■■■■□ 3.63
HACD1-206ENST00000632169 CLASP1Q7Z460 1538 aa37.62■■■■□ 3.61
HACD1-206ENST00000632169 ADAMTS12P58397 1594 aa37.53■■■■□ 3.6
HACD1-206ENST00000632169 ERICH3Q5RHP9 1530 aa37.49■■■■□ 3.59
HACD1-206ENST00000632169 GRIN2AQ12879 1464 aa37.46■■■■□ 3.59
HACD1-206ENST00000632169 ARAP1Q96P48 1450 aa37.45■■■■□ 3.59
HACD1-206ENST00000632169 CYB5RLQ6IPT4 315 aa37.44■■■■□ 3.58
HACD1-206ENST00000632169 FHAD1B1AJZ9 1412 aa37.44■■■■□ 3.58
HACD1-206ENST00000632169 NUP160Q12769 1436 aa37.33■■■■□ 3.57
HACD1-206ENST00000632169 CEP170Q5SW79 1584 aa37.32■■■■□ 3.57
HACD1-206ENST00000632169 KIF27Q86VH2 1401 aa37.24■■■■□ 3.55
HACD1-206ENST00000632169 IGF1RP08069 1367 aa37.2■■■■□ 3.55
HACD1-206ENST00000632169 ERCC6L2Q5T890 1561 aa37.11■■■■□ 3.53
HACD1-206ENST00000632169 SHROOM2Q13796 1616 aa37.09■■■■□ 3.53
HACD1-206ENST00000632169 CUL7Q14999 1698 aa37.05■■■■□ 3.52
HACD1-206ENST00000632169 RUSC2Q8N2Y8 1516 aa36.98■■■■□ 3.51
HACD1-206ENST00000632169 CARMIL1Q5VZK9 1371 aa36.95■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms