RNA–Protein interactions for RNA: ENST00000631289.1

CHRNA4-214, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 840 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-214ENST00000631289 NISCHQ9Y2I1 1504 aa52.03■■■■■ 5.92
CHRNA4-214ENST00000631289 CCDC180Q9P1Z9 1646 aa46.72■■■■■ 5.07
CHRNA4-214ENST00000631289 ABCC9O60706 1549 aa46.64■■■■■ 5.06
CHRNA4-214ENST00000631289 RB1CC1Q8TDY2 1594 aa44.45■■■■■ 4.71
CHRNA4-214ENST00000631289 NACADO15069 1562 aa44.14■■■■■ 4.66
CHRNA4-214ENST00000631289 DCAF8L2P0C7V8 631 aa43.97■■■■■ 4.63
CHRNA4-214ENST00000631289 DNAJC5BQ9UF47 199 aa43.63■■■■■ 4.57
CHRNA4-214ENST00000631289 MYO15BQ96JP2 1530 aa43.53■■■■■ 4.56
CHRNA4-214ENST00000631289 PABPN1Q86U42 306 aaKnown RBP eCLIP43.42■■■■■ 4.54
CHRNA4-214ENST00000631289 UNC13AQ9UPW8 1703 aa43.42■■■■■ 4.54
CHRNA4-214ENST00000631289 ZCCHC6Q5VYS8 1495 aaKnown RBP43.13■■■■■ 4.49
CHRNA4-214ENST00000631289 BICRAQ9NZM4 1560 aa43.07■■■■■ 4.49
CHRNA4-214ENST00000631289 DCAF1Q9Y4B6 1507 aa42.99■■■■■ 4.47
CHRNA4-214ENST00000631289 SHROOM4Q9ULL8 1493 aa42.57■■■■■ 4.41
CHRNA4-214ENST00000631289 SCRIBQ14160 1630 aa42.55■■■■■ 4.4
CHRNA4-214ENST00000631289 CC2D2AQ9P2K1 1620 aa42.13■■■■■ 4.34
CHRNA4-214ENST00000631289 EIF4G1Q04637 1599 aaKnown RBP42.05■■■■■ 4.32
CHRNA4-214ENST00000631289 CECR2Q9BXF3 1484 aa42.02■■■■■ 4.32
CHRNA4-214ENST00000631289 NCAPD3P42695 1498 aa40.72■■■■■ 4.11
CHRNA4-214ENST00000631289 ATAD2BQ9ULI0 1458 aa40.6■■■■■ 4.09
CHRNA4-214ENST00000631289 SMARCA4P51532 1647 aa40.6■■■■■ 4.09
CHRNA4-214ENST00000631289 SMARCA2P51531 1590 aa40.54■■■■■ 4.08
CHRNA4-214ENST00000631289 HMGXB3Q12766 1538 aa40.45■■■■■ 4.07
CHRNA4-214ENST00000631289 BAZ1AQ9NRL2 1556 aaPredicted RBP40.42■■■■■ 4.06
CHRNA4-214ENST00000631289 ERCC6Q03468 1493 aa40.32■■■■■ 4.04
CHRNA4-214ENST00000631289 BAZ1BQ9UIG0 1483 aaKnown RBP40.26■■■■■ 4.03
CHRNA4-214ENST00000631289 CUX2O14529 1486 aa40.19■■■■■ 4.03
CHRNA4-214ENST00000631289 PEG3Q9GZU2 1588 aa40.18■■■■■ 4.02
CHRNA4-214ENST00000631289 DNAJC5Q9H3Z4 198 aa40.1■■■■■ 4.01
CHRNA4-214ENST00000631289 MROH2BQ7Z745 1585 aa40.07■■■■■ 4.01
CHRNA4-214ENST00000631289 NESP48681 1621 aa40.05■■■■■ 4
CHRNA4-214ENST00000631289 LAMC3Q9Y6N6 1575 aa39.84■■■■□ 3.97
CHRNA4-214ENST00000631289 THOC2Q8NI27 1593 aaKnown RBP39.65■■■■□ 3.94
CHRNA4-214ENST00000631289 WIZO95785 1651 aa39.62■■■■□ 3.93
CHRNA4-214ENST00000631289 PDS5BQ9NTI5 1447 aa39.62■■■■□ 3.93
CHRNA4-214ENST00000631289 KIF21AQ7Z4S6 1674 aa39.58■■■■□ 3.93
CHRNA4-214ENST00000631289 CADPSQ9ULU8 1353 aa39.5■■■■□ 3.91
CHRNA4-214ENST00000631289 RSF1Q96T23 1441 aaPredicted RBP39.26■■■■□ 3.88
CHRNA4-214ENST00000631289 MRC2Q9UBG0 1479 aa39.25■■■■□ 3.87
CHRNA4-214ENST00000631289 WDR62O43379 1518 aa39.13■■■■□ 3.85
CHRNA4-214ENST00000631289 TOP2AP11388 1531 aaKnown RBP39.13■■■■□ 3.85
CHRNA4-214ENST00000631289 CEP164Q9UPV0 1460 aa39.11■■■■□ 3.85
CHRNA4-214ENST00000631289 FANCD2Q9BXW9 1451 aa39.05■■■■□ 3.84
CHRNA4-214ENST00000631289 CFTRP13569 1480 aa39.05■■■■□ 3.84
CHRNA4-214ENST00000631289 PRDM2Q13029 1718 aa38.73■■■■□ 3.79
CHRNA4-214ENST00000631289 URB2Q14146 1524 aaKnown RBP38.7■■■■□ 3.79
CHRNA4-214ENST00000631289 CCDC88BA6NC98 1476 aa38.67■■■■□ 3.78
CHRNA4-214ENST00000631289 TRIM41Q8WV44 630 aa38.41■■■■□ 3.74
CHRNA4-214ENST00000631289 OSCARQ8IYS5 282 aa38.39■■■■□ 3.74
CHRNA4-214ENST00000631289 IFT140Q96RY7 1462 aa38.33■■■■□ 3.73
CHRNA4-214ENST00000631289 TOPBP1Q92547 1522 aa38.32■■■■□ 3.72
CHRNA4-214ENST00000631289 ABCC8Q09428 1581 aa38.29■■■■□ 3.72
CHRNA4-214ENST00000631289 ZNF608Q9ULD9 1512 aaPredicted RBP38.21■■■■□ 3.71
CHRNA4-214ENST00000631289 DNMBPQ6XZF7 1577 aa38.2■■■■□ 3.71
CHRNA4-214ENST00000631289 EIF4G3O43432 1585 aaKnown RBP38.04■■■■□ 3.68
CHRNA4-214ENST00000631289 TARBP1Q13395 1621 aaKnown RBP37.96■■■■□ 3.67
CHRNA4-214ENST00000631289 POLA1P09884 1462 aaPredicted RBP37.92■■■■□ 3.66
CHRNA4-214ENST00000631289 AQRO60306 1485 aaKnown RBP eCLIP37.9■■■■□ 3.66
CHRNA4-214ENST00000631289 RIMBP3CA6NJZ7 1639 aa37.86■■■■□ 3.65
CHRNA4-214ENST00000631289 RIMBP3BA6NNM3 1639 aa37.86■■■■□ 3.65
CHRNA4-214ENST00000631289 RIMBP3Q9UFD9 1639 aa37.86■■■■□ 3.65
CHRNA4-214ENST00000631289 SOGA1O94964 1423 aa37.78■■■■□ 3.64
CHRNA4-214ENST00000631289 RAD54L2Q9Y4B4 1467 aa37.77■■■■□ 3.64
CHRNA4-214ENST00000631289 CHD1O14646 1710 aa37.77■■■■□ 3.64
CHRNA4-214ENST00000631289 ARHGEF11O15085 1522 aa37.74■■■■□ 3.63
CHRNA4-214ENST00000631289 FBLN2P98095 1184 aa37.7■■■■□ 3.63
CHRNA4-214ENST00000631289 FGD5Q6ZNL6 1462 aa37.7■■■■□ 3.63
CHRNA4-214ENST00000631289 TDRD9Q8NDG6 1382 aaKnown RBP37.68■■■■□ 3.62
CHRNA4-214ENST00000631289 CUX1P39880 1505 aa37.65■■■■□ 3.62
CHRNA4-214ENST00000631289 WDR97A6NE52 1622 aa37.63■■■■□ 3.61
CHRNA4-214ENST00000631289 SUPT5HO00267 1087 aaKnown RBP37.62■■■■□ 3.61
CHRNA4-214ENST00000631289 SNAPC4Q5SXM2 1469 aa37.52■■■■□ 3.6
CHRNA4-214ENST00000631289 CYB5RLQ6IPT4 315 aa37.48■■■■□ 3.59
CHRNA4-214ENST00000631289 GRIN2BQ13224 1484 aa37.45■■■■□ 3.59
CHRNA4-214ENST00000631289 MAGI1Q96QZ7 1491 aaPredicted RBP37.45■■■■□ 3.59
CHRNA4-214ENST00000631289 CHMP7Q8WUX9 453 aaPredicted RBP37.43■■■■□ 3.58
CHRNA4-214ENST00000631289 ARAP1Q96P48 1450 aa37.35■■■■□ 3.57
CHRNA4-214ENST00000631289 SYNJ1O43426 1573 aa37.34■■■■□ 3.57
CHRNA4-214ENST00000631289 PBRM1Q86U86 1689 aa37.32■■■■□ 3.57
CHRNA4-214ENST00000631289 SYNJ2O15056 1496 aa37.32■■■■□ 3.56
CHRNA4-214ENST00000631289 GAPVD1Q14C86 1478 aa37.32■■■■□ 3.56
CHRNA4-214ENST00000631289 CLASP1Q7Z460 1538 aa37.3■■■■□ 3.56
CHRNA4-214ENST00000631289 ABCA10Q8WWZ4 1543 aa37.28■■■■□ 3.56
CHRNA4-214ENST00000631289 ABCA5Q8WWZ7 1642 aa37.21■■■■□ 3.55
CHRNA4-214ENST00000631289 WRNQ14191 1432 aaPredicted RBP eCLIP37.17■■■■□ 3.54
CHRNA4-214ENST00000631289 TRHP20396 242 aaPredicted RBP37.1■■■■□ 3.53
CHRNA4-214ENST00000631289 TOP2BQ02880 1626 aa37.1■■■■□ 3.53
CHRNA4-214ENST00000631289 BIVM-ERCC5R4GMW8 1640 aa37.1■■■■□ 3.53
CHRNA4-214ENST00000631289 GRIN2AQ12879 1464 aa36.95■■■■□ 3.51
CHRNA4-214ENST00000631289 ADAMTS12P58397 1594 aa36.94■■■■□ 3.5
CHRNA4-214ENST00000631289 FHAD1B1AJZ9 1412 aa36.85■■■■□ 3.49
CHRNA4-214ENST00000631289 ERICH3Q5RHP9 1530 aa36.83■■■■□ 3.49
CHRNA4-214ENST00000631289 NUP160Q12769 1436 aa36.81■■■■□ 3.48
CHRNA4-214ENST00000631289 CEP170Q5SW79 1584 aa36.79■■■■□ 3.48
CHRNA4-214ENST00000631289 ERCC6L2Q5T890 1561 aa36.7■■■■□ 3.46
CHRNA4-214ENST00000631289 SHROOM2Q13796 1616 aa36.64■■■■□ 3.46
CHRNA4-214ENST00000631289 PRG4Q92954 1404 aaPredicted RBP36.48■■■■□ 3.43
CHRNA4-214ENST00000631289 JPH4Q96JJ6 628 aa36.46■■■■□ 3.43
CHRNA4-214ENST00000631289 RUSC2Q8N2Y8 1516 aa36.4■■■■□ 3.42
CHRNA4-214ENST00000631289 KIF27Q86VH2 1401 aa36.4■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms