RNA–Protein interactions for RNA: ENST00000631121.1

SPTAN1-225, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-225ENST00000631121 NISCHQ9Y2I1 1504 aa16.97■□□□□ 0.31
SPTAN1-225ENST00000631121 CCDC180Q9P1Z9 1646 aa14.79□□□□□ -0.04
SPTAN1-225ENST00000631121 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
SPTAN1-225ENST00000631121 DCAF8L2P0C7V8 631 aa14.15□□□□□ -0.14
SPTAN1-225ENST00000631121 DCAF1Q9Y4B6 1507 aa14.06□□□□□ -0.16
SPTAN1-225ENST00000631121 ABCC9O60706 1549 aa13.96□□□□□ -0.17
SPTAN1-225ENST00000631121 MYO15BQ96JP2 1530 aa13.9□□□□□ -0.18
SPTAN1-225ENST00000631121 SHROOM4Q9ULL8 1493 aa13.89□□□□□ -0.19
SPTAN1-225ENST00000631121 NACADO15069 1562 aa13.82□□□□□ -0.2
SPTAN1-225ENST00000631121 RB1CC1Q8TDY2 1594 aa13.7□□□□□ -0.22
SPTAN1-225ENST00000631121 SCRIBQ14160 1630 aa13.58□□□□□ -0.24
SPTAN1-225ENST00000631121 SUPT5HO00267 1087 aaKnown RBP13.45□□□□□ -0.26
SPTAN1-225ENST00000631121 UNC13AQ9UPW8 1703 aa13.22□□□□□ -0.29
SPTAN1-225ENST00000631121 PABPN1Q86U42 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
SPTAN1-225ENST00000631121 RSF1Q96T23 1441 aaPredicted RBP13.18□□□□□ -0.3
SPTAN1-225ENST00000631121 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
SPTAN1-225ENST00000631121 BICRAQ9NZM4 1560 aa13.13□□□□□ -0.31
SPTAN1-225ENST00000631121 CECR2Q9BXF3 1484 aa13.13□□□□□ -0.31
SPTAN1-225ENST00000631121 MROH2BQ7Z745 1585 aa13.07□□□□□ -0.32
SPTAN1-225ENST00000631121 SMARCA4P51532 1647 aa13.02□□□□□ -0.32
SPTAN1-225ENST00000631121 WIZO95785 1651 aa12.95□□□□□ -0.34
SPTAN1-225ENST00000631121 TOP2AP11388 1531 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-225ENST00000631121 SMARCA2P51531 1590 aa12.88□□□□□ -0.35
SPTAN1-225ENST00000631121 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
SPTAN1-225ENST00000631121 CHIC1Q5VXU3 224 aa12.84□□□□□ -0.35
SPTAN1-225ENST00000631121 ATAD2BQ9ULI0 1458 aa12.82□□□□□ -0.36
SPTAN1-225ENST00000631121 BAZ1BQ9UIG0 1483 aaKnown RBP12.81□□□□□ -0.36
SPTAN1-225ENST00000631121 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
SPTAN1-225ENST00000631121 CCDC88BA6NC98 1476 aa12.74□□□□□ -0.37
SPTAN1-225ENST00000631121 NCAPD3P42695 1498 aa12.73□□□□□ -0.37
SPTAN1-225ENST00000631121 HMGXB3Q12766 1538 aa12.71□□□□□ -0.38
SPTAN1-225ENST00000631121 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
SPTAN1-225ENST00000631121 CC2D2AQ9P2K1 1620 aa12.6□□□□□ -0.39
SPTAN1-225ENST00000631121 WRNQ14191 1432 aaPredicted RBP eCLIP12.46□□□□□ -0.41
SPTAN1-225ENST00000631121 CFTRP13569 1480 aa12.45□□□□□ -0.42
SPTAN1-225ENST00000631121 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
SPTAN1-225ENST00000631121 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
SPTAN1-225ENST00000631121 FAM9AQ8IZU1 332 aaPredicted RBP12.41□□□□□ -0.42
SPTAN1-225ENST00000631121 EEA1Q15075 1411 aa12.38□□□□□ -0.43
SPTAN1-225ENST00000631121 LOC105371045A0A1W2PR82 267 aa12.33□□□□□ -0.44
SPTAN1-225ENST00000631121 PRDM2Q13029 1718 aa12.32□□□□□ -0.44
SPTAN1-225ENST00000631121 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
SPTAN1-225ENST00000631121 TOP2BQ02880 1626 aa12.3□□□□□ -0.44
SPTAN1-225ENST00000631121 SYNJ1O43426 1573 aa12.3□□□□□ -0.44
SPTAN1-225ENST00000631121 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
SPTAN1-225ENST00000631121 FANCD2Q9BXW9 1451 aa12.28□□□□□ -0.44
SPTAN1-225ENST00000631121 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
SPTAN1-225ENST00000631121 BIVM-ERCC5R4GMW8 1640 aa12.26□□□□□ -0.45
SPTAN1-225ENST00000631121 SOGA1O94964 1423 aa12.24□□□□□ -0.45
SPTAN1-225ENST00000631121 CEP164Q9UPV0 1460 aa12.23□□□□□ -0.45
SPTAN1-225ENST00000631121 CUX1P39880 1505 aa12.22□□□□□ -0.45
SPTAN1-225ENST00000631121 EHMT2Q96KQ7 1210 aa12.21□□□□□ -0.45
SPTAN1-225ENST00000631121 NESP48681 1621 aa12.21□□□□□ -0.46
SPTAN1-225ENST00000631121 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
SPTAN1-225ENST00000631121 UBTFP17480 764 aaKnown RBP12.18□□□□□ -0.46
SPTAN1-225ENST00000631121 DNAJC5BQ9UF47 199 aa12.18□□□□□ -0.46
SPTAN1-225ENST00000631121 DNMBPQ6XZF7 1577 aa12.17□□□□□ -0.46
SPTAN1-225ENST00000631121 GOLGA3Q08378 1498 aa12.16□□□□□ -0.46
SPTAN1-225ENST00000631121 RUSC2Q8N2Y8 1516 aa12.14□□□□□ -0.47
SPTAN1-225ENST00000631121 FGD5Q6ZNL6 1462 aa12.14□□□□□ -0.47
SPTAN1-225ENST00000631121 TNIKQ9UKE5 1360 aa12.13□□□□□ -0.47
SPTAN1-225ENST00000631121 TOPBP1Q92547 1522 aa12.12□□□□□ -0.47
SPTAN1-225ENST00000631121 KIF21BO75037 1637 aa12.11□□□□□ -0.47
SPTAN1-225ENST00000631121 CUX2O14529 1486 aa12.1□□□□□ -0.47
SPTAN1-225ENST00000631121 ERCC6Q03468 1493 aa12.07□□□□□ -0.48
SPTAN1-225ENST00000631121 MRC2Q9UBG0 1479 aa12.07□□□□□ -0.48
SPTAN1-225ENST00000631121 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
SPTAN1-225ENST00000631121 POLA1P09884 1462 aaPredicted RBP12.06□□□□□ -0.48
SPTAN1-225ENST00000631121 KIF21AQ7Z4S6 1674 aa12.04□□□□□ -0.48
SPTAN1-225ENST00000631121 ERICH3Q5RHP9 1530 aa12.04□□□□□ -0.48
SPTAN1-225ENST00000631121 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
SPTAN1-225ENST00000631121 CEP162Q5TB80 1403 aa12.03□□□□□ -0.48
SPTAN1-225ENST00000631121 PRXQ9BXM0 1461 aa12.02□□□□□ -0.48
SPTAN1-225ENST00000631121 RAD54L2Q9Y4B4 1467 aa12.01□□□□□ -0.49
SPTAN1-225ENST00000631121 RAPGEF2Q9Y4G8 1499 aa12.01□□□□□ -0.49
SPTAN1-225ENST00000631121 IGF1RP08069 1367 aa12□□□□□ -0.49
SPTAN1-225ENST00000631121 CARMIL1Q5VZK9 1371 aa12□□□□□ -0.49
SPTAN1-225ENST00000631121 CLIP1P30622 1438 aa11.96□□□□□ -0.49
SPTAN1-225ENST00000631121 WDR62O43379 1518 aa11.95□□□□□ -0.5
SPTAN1-225ENST00000631121 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
SPTAN1-225ENST00000631121 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
SPTAN1-225ENST00000631121 APLP2Q06481 763 aa11.94□□□□□ -0.5
SPTAN1-225ENST00000631121 TDRD9Q8NDG6 1382 aaKnown RBP11.93□□□□□ -0.5
SPTAN1-225ENST00000631121 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
SPTAN1-225ENST00000631121 CUL7Q14999 1698 aa11.93□□□□□ -0.5
SPTAN1-225ENST00000631121 RANGAP1P46060 587 aaPredicted RBP11.91□□□□□ -0.5
SPTAN1-225ENST00000631121 WDR97A6NE52 1622 aa11.89□□□□□ -0.51
SPTAN1-225ENST00000631121 PCGF6Q9BYE7 350 aa11.88□□□□□ -0.51
SPTAN1-225ENST00000631121 TARBP1Q13395 1621 aaKnown RBP11.88□□□□□ -0.51
SPTAN1-225ENST00000631121 ABCA5Q8WWZ7 1642 aa11.88□□□□□ -0.51
SPTAN1-225ENST00000631121 GRIN2BQ13224 1484 aa11.87□□□□□ -0.51
SPTAN1-225ENST00000631121 VPS8Q8N3P4 1428 aa11.86□□□□□ -0.51
SPTAN1-225ENST00000631121 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
SPTAN1-225ENST00000631121 FHAD1B1AJZ9 1412 aa11.84□□□□□ -0.51
SPTAN1-225ENST00000631121 AQRO60306 1485 aaKnown RBP eCLIP11.83□□□□□ -0.52
SPTAN1-225ENST00000631121 PBRM1Q86U86 1689 aa11.78□□□□□ -0.52
SPTAN1-225ENST00000631121 ZNF608Q9ULD9 1512 aaPredicted RBP11.76□□□□□ -0.53
SPTAN1-225ENST00000631121 PPARGC1BQ86YN6 1023 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-225ENST00000631121 CHMP7Q8WUX9 453 aaPredicted RBP11.76□□□□□ -0.53
SPTAN1-225ENST00000631121 MAGI1Q96QZ7 1491 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 635.4 ms