RNA–Protein interactions for RNA: ENST00000630274.2

KCNQ2-219, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 3

Gene KCNQ2, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-219ENST00000630274 NISCHQ9Y2I1 1504 aa42.25■■■■■ 4.35
KCNQ2-219ENST00000630274 CCDC180Q9P1Z9 1646 aa37.23■■■■□ 3.55
KCNQ2-219ENST00000630274 ZCCHC6Q5VYS8 1495 aaKnown RBP35.43■■■■□ 3.26
KCNQ2-219ENST00000630274 ABCC9O60706 1549 aa35.23■■■■□ 3.23
KCNQ2-219ENST00000630274 DCAF1Q9Y4B6 1507 aa35.15■■■■□ 3.22
KCNQ2-219ENST00000630274 MYO15BQ96JP2 1530 aa34.96■■■■□ 3.19
KCNQ2-219ENST00000630274 NACADO15069 1562 aa34.74■■■■□ 3.15
KCNQ2-219ENST00000630274 DCAF8L2P0C7V8 631 aa34.64■■■■□ 3.14
KCNQ2-219ENST00000630274 RB1CC1Q8TDY2 1594 aa34.51■■■■□ 3.12
KCNQ2-219ENST00000630274 SCRIBQ14160 1630 aa33.86■■■■□ 3.01
KCNQ2-219ENST00000630274 SHROOM4Q9ULL8 1493 aa33.74■■■□□ 2.99
KCNQ2-219ENST00000630274 UNC13AQ9UPW8 1703 aa33.63■■■□□ 2.97
KCNQ2-219ENST00000630274 BICRAQ9NZM4 1560 aa33.34■■■□□ 2.93
KCNQ2-219ENST00000630274 PABPN1Q86U42 306 aaKnown RBP eCLIP33.01■■■□□ 2.87
KCNQ2-219ENST00000630274 BAZ1AQ9NRL2 1556 aaPredicted RBP32.73■■■□□ 2.83
KCNQ2-219ENST00000630274 CECR2Q9BXF3 1484 aa32.69■■■□□ 2.82
KCNQ2-219ENST00000630274 SMARCA4P51532 1647 aa32.57■■■□□ 2.8
KCNQ2-219ENST00000630274 RSF1Q96T23 1441 aaPredicted RBP32.52■■■□□ 2.8
KCNQ2-219ENST00000630274 MROH2BQ7Z745 1585 aa32.51■■■□□ 2.79
KCNQ2-219ENST00000630274 EIF4G1Q04637 1599 aaKnown RBP32.41■■■□□ 2.78
KCNQ2-219ENST00000630274 PEG3Q9GZU2 1588 aa32.33■■■□□ 2.77
KCNQ2-219ENST00000630274 SUPT5HO00267 1087 aaKnown RBP32.29■■■□□ 2.76
KCNQ2-219ENST00000630274 SMARCA2P51531 1590 aa32.21■■■□□ 2.75
KCNQ2-219ENST00000630274 WIZO95785 1651 aa32.19■■■□□ 2.74
KCNQ2-219ENST00000630274 ATAD2BQ9ULI0 1458 aa32.12■■■□□ 2.73
KCNQ2-219ENST00000630274 TOP2AP11388 1531 aaKnown RBP32.02■■■□□ 2.72
KCNQ2-219ENST00000630274 NCAPD3P42695 1498 aa32.01■■■□□ 2.71
KCNQ2-219ENST00000630274 CC2D2AQ9P2K1 1620 aa31.99■■■□□ 2.71
KCNQ2-219ENST00000630274 HMGXB3Q12766 1538 aa31.99■■■□□ 2.71
KCNQ2-219ENST00000630274 BAZ1BQ9UIG0 1483 aaKnown RBP31.92■■■□□ 2.7
KCNQ2-219ENST00000630274 DNAJC5BQ9UF47 199 aa31.92■■■□□ 2.7
KCNQ2-219ENST00000630274 CCDC88BA6NC98 1476 aa31.56■■■□□ 2.64
KCNQ2-219ENST00000630274 CFTRP13569 1480 aa31.14■■■□□ 2.58
KCNQ2-219ENST00000630274 CADPSQ9ULU8 1353 aa31.09■■■□□ 2.57
KCNQ2-219ENST00000630274 LAMC3Q9Y6N6 1575 aa31.03■■■□□ 2.56
KCNQ2-219ENST00000630274 PRDM2Q13029 1718 aa31.03■■■□□ 2.56
KCNQ2-219ENST00000630274 CHIC1Q5VXU3 224 aa30.8■■■□□ 2.52
KCNQ2-219ENST00000630274 NESP48681 1621 aa30.76■■■□□ 2.52
KCNQ2-219ENST00000630274 PDS5BQ9NTI5 1447 aa30.76■■■□□ 2.51
KCNQ2-219ENST00000630274 FANCD2Q9BXW9 1451 aa30.71■■■□□ 2.51
KCNQ2-219ENST00000630274 WRNQ14191 1432 aaPredicted RBP eCLIP30.66■■■□□ 2.5
KCNQ2-219ENST00000630274 ABCC8Q09428 1581 aa30.65■■■□□ 2.5
KCNQ2-219ENST00000630274 CEP164Q9UPV0 1460 aa30.6■■■□□ 2.49
KCNQ2-219ENST00000630274 TRIM41Q8WV44 630 aa30.55■■■□□ 2.48
KCNQ2-219ENST00000630274 TOP2BQ02880 1626 aa30.53■■■□□ 2.48
KCNQ2-219ENST00000630274 BIVM-ERCC5R4GMW8 1640 aa30.53■■■□□ 2.48
KCNQ2-219ENST00000630274 SYNJ1O43426 1573 aa30.49■■■□□ 2.47
KCNQ2-219ENST00000630274 KIF21AQ7Z4S6 1674 aa30.49■■■□□ 2.47
KCNQ2-219ENST00000630274 CUX1P39880 1505 aa30.45■■■□□ 2.47
KCNQ2-219ENST00000630274 DNMBPQ6XZF7 1577 aa30.44■■■□□ 2.46
KCNQ2-219ENST00000630274 MRC2Q9UBG0 1479 aa30.36■■■□□ 2.45
KCNQ2-219ENST00000630274 ERCC6Q03468 1493 aa30.35■■■□□ 2.45
KCNQ2-219ENST00000630274 TOPBP1Q92547 1522 aa30.34■■■□□ 2.45
KCNQ2-219ENST00000630274 URB2Q14146 1524 aaKnown RBP30.32■■■□□ 2.44
KCNQ2-219ENST00000630274 WDR62O43379 1518 aa30.26■■■□□ 2.43
KCNQ2-219ENST00000630274 THOC2Q8NI27 1593 aaKnown RBP30.21■■■□□ 2.43
KCNQ2-219ENST00000630274 FGD5Q6ZNL6 1462 aa30.2■■■□□ 2.43
KCNQ2-219ENST00000630274 EEA1Q15075 1411 aa30.16■■■□□ 2.42
KCNQ2-219ENST00000630274 POLA1P09884 1462 aaPredicted RBP30.14■■■□□ 2.42
KCNQ2-219ENST00000630274 ABCA10Q8WWZ4 1543 aa30.03■■■□□ 2.4
KCNQ2-219ENST00000630274 SOGA1O94964 1423 aa30.03■■■□□ 2.4
KCNQ2-219ENST00000630274 KIF27Q86VH2 1401 aa29.97■■■□□ 2.39
KCNQ2-219ENST00000630274 WDR97A6NE52 1622 aa29.96■■■□□ 2.39
KCNQ2-219ENST00000630274 IFT140Q96RY7 1462 aa29.95■■■□□ 2.39
KCNQ2-219ENST00000630274 TARBP1Q13395 1621 aaKnown RBP29.95■■■□□ 2.38
KCNQ2-219ENST00000630274 CUX2O14529 1486 aa29.94■■■□□ 2.38
KCNQ2-219ENST00000630274 RAD54L2Q9Y4B4 1467 aa29.92■■■□□ 2.38
KCNQ2-219ENST00000630274 RUSC2Q8N2Y8 1516 aa29.85■■■□□ 2.37
KCNQ2-219ENST00000630274 ABCA5Q8WWZ7 1642 aa29.82■■■□□ 2.36
KCNQ2-219ENST00000630274 CSRNP3Q8WYN3 585 aa29.81■■■□□ 2.36
KCNQ2-219ENST00000630274 FAM9AQ8IZU1 332 aaPredicted RBP29.74■■■□□ 2.35
KCNQ2-219ENST00000630274 ERICH3Q5RHP9 1530 aa29.71■■■□□ 2.35
KCNQ2-219ENST00000630274 KIF21BO75037 1637 aa29.71■■■□□ 2.35
KCNQ2-219ENST00000630274 GAPVD1Q14C86 1478 aa29.71■■■□□ 2.35
KCNQ2-219ENST00000630274 IGF1RP08069 1367 aa29.67■■■□□ 2.34
KCNQ2-219ENST00000630274 TDRD9Q8NDG6 1382 aaKnown RBP29.66■■■□□ 2.34
KCNQ2-219ENST00000630274 PRXQ9BXM0 1461 aa29.66■■■□□ 2.34
KCNQ2-219ENST00000630274 CUL7Q14999 1698 aa29.65■■■□□ 2.34
KCNQ2-219ENST00000630274 EIF4G3O43432 1585 aaKnown RBP29.61■■■□□ 2.33
KCNQ2-219ENST00000630274 GRIN2BQ13224 1484 aa29.61■■■□□ 2.33
KCNQ2-219ENST00000630274 ZNF608Q9ULD9 1512 aaPredicted RBP29.61■■■□□ 2.33
KCNQ2-219ENST00000630274 PBRM1Q86U86 1689 aa29.6■■■□□ 2.33
KCNQ2-219ENST00000630274 GOLGA3Q08378 1498 aa29.59■■■□□ 2.33
KCNQ2-219ENST00000630274 AQRO60306 1485 aaKnown RBP eCLIP29.56■■■□□ 2.32
KCNQ2-219ENST00000630274 CARMIL1Q5VZK9 1371 aa29.52■■■□□ 2.32
KCNQ2-219ENST00000630274 RAPGEF2Q9Y4G8 1499 aa29.5■■■□□ 2.31
KCNQ2-219ENST00000630274 MAGI1Q96QZ7 1491 aaPredicted RBP29.46■■■□□ 2.31
KCNQ2-219ENST00000630274 FHAD1B1AJZ9 1412 aa29.45■■■□□ 2.3
KCNQ2-219ENST00000630274 ADAMTS12P58397 1594 aa29.44■■■□□ 2.3
KCNQ2-219ENST00000630274 LOC105371045A0A1W2PR82 267 aa29.42■■■□□ 2.3
KCNQ2-219ENST00000630274 TNIKQ9UKE5 1360 aa29.4■■■□□ 2.3
KCNQ2-219ENST00000630274 SNAPC4Q5SXM2 1469 aa29.36■■■□□ 2.29
KCNQ2-219ENST00000630274 SYNJ2O15056 1496 aa29.3■■■□□ 2.28
KCNQ2-219ENST00000630274 UBTFP17480 764 aaKnown RBP29.28■■■□□ 2.28
KCNQ2-219ENST00000630274 GRIN2AQ12879 1464 aa29.21■■■□□ 2.27
KCNQ2-219ENST00000630274 CTTNBP2Q8WZ74 1663 aa29.18■■■□□ 2.26
KCNQ2-219ENST00000630274 EHMT2Q96KQ7 1210 aa29.15■■■□□ 2.26
KCNQ2-219ENST00000630274 CEP162Q5TB80 1403 aa29.13■■■□□ 2.25
KCNQ2-219ENST00000630274 CHMP7Q8WUX9 453 aaPredicted RBP29.12■■■□□ 2.25
KCNQ2-219ENST00000630274 NUP160Q12769 1436 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms