RNA–Protein interactions for RNA: ENST00000629918.1

TTC38-207, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 5 BASIC

Gene TTC38, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-207ENST00000629918 NISCHQ9Y2I1 1504 aa26.84■■□□□ 1.89
TTC38-207ENST00000629918 ABCC9O60706 1549 aa25.56■■□□□ 1.68
TTC38-207ENST00000629918 DNAJC5BQ9UF47 199 aa25.13■■□□□ 1.61
TTC38-207ENST00000629918 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
TTC38-207ENST00000629918 RB1CC1Q8TDY2 1594 aa23.84■■□□□ 1.41
TTC38-207ENST00000629918 DNAJC5Q9H3Z4 198 aa23.82■■□□□ 1.4
TTC38-207ENST00000629918 PABPN1Q86U42 306 aaKnown RBP eCLIP23.63■■□□□ 1.37
TTC38-207ENST00000629918 NACADO15069 1562 aa23.45■■□□□ 1.34
TTC38-207ENST00000629918 UNC13AQ9UPW8 1703 aa23.36■■□□□ 1.33
TTC38-207ENST00000629918 BICRAQ9NZM4 1560 aa23.33■■□□□ 1.33
TTC38-207ENST00000629918 CECR2Q9BXF3 1484 aa23.16■■□□□ 1.3
TTC38-207ENST00000629918 CC2D2AQ9P2K1 1620 aa23.07■■□□□ 1.28
TTC38-207ENST00000629918 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
TTC38-207ENST00000629918 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
TTC38-207ENST00000629918 SHROOM4Q9ULL8 1493 aa22.83■■□□□ 1.25
TTC38-207ENST00000629918 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
TTC38-207ENST00000629918 CUX2O14529 1486 aa22.52■■□□□ 1.2
TTC38-207ENST00000629918 SCRIBQ14160 1630 aa22.21■■□□□ 1.15
TTC38-207ENST00000629918 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
TTC38-207ENST00000629918 TRIM41Q8WV44 630 aa22.13■■□□□ 1.13
TTC38-207ENST00000629918 ERCC6Q03468 1493 aa22.05■■□□□ 1.12
TTC38-207ENST00000629918 ZCCHC6Q5VYS8 1495 aaKnown RBP22.02■■□□□ 1.12
TTC38-207ENST00000629918 NCAPD3P42695 1498 aa21.73■■□□□ 1.07
TTC38-207ENST00000629918 THOC2Q8NI27 1593 aaKnown RBP21.71■■□□□ 1.07
TTC38-207ENST00000629918 NESP48681 1621 aa21.69■■□□□ 1.06
TTC38-207ENST00000629918 ATAD2BQ9ULI0 1458 aa21.48■■□□□ 1.03
TTC38-207ENST00000629918 HMGXB3Q12766 1538 aa21.41■■□□□ 1.02
TTC38-207ENST00000629918 SMARCA2P51531 1590 aa21.37■■□□□ 1.01
TTC38-207ENST00000629918 LAMC3Q9Y6N6 1575 aa21.34■■□□□ 1.01
TTC38-207ENST00000629918 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
TTC38-207ENST00000629918 BAZ1AQ9NRL2 1556 aaPredicted RBP21.28■■□□□ 1
TTC38-207ENST00000629918 OSCARQ8IYS5 282 aa21.26■□□□□ 0.99
TTC38-207ENST00000629918 PDS5BQ9NTI5 1447 aa21.22■□□□□ 0.99
TTC38-207ENST00000629918 WDR62O43379 1518 aa21.15■□□□□ 0.98
TTC38-207ENST00000629918 RIMBP3CA6NJZ7 1639 aa21.15■□□□□ 0.98
TTC38-207ENST00000629918 RIMBP3BA6NNM3 1639 aa21.15■□□□□ 0.98
TTC38-207ENST00000629918 RIMBP3Q9UFD9 1639 aa21.15■□□□□ 0.98
TTC38-207ENST00000629918 SMARCA4P51532 1647 aa21.14■□□□□ 0.97
TTC38-207ENST00000629918 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
TTC38-207ENST00000629918 BAZ1BQ9UIG0 1483 aaKnown RBP21.12■□□□□ 0.97
TTC38-207ENST00000629918 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.96
TTC38-207ENST00000629918 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
TTC38-207ENST00000629918 CADPSQ9ULU8 1353 aa20.97■□□□□ 0.95
TTC38-207ENST00000629918 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
TTC38-207ENST00000629918 TRHP20396 242 aaPredicted RBP20.85■□□□□ 0.93
TTC38-207ENST00000629918 CYB5RLQ6IPT4 315 aa20.81■□□□□ 0.92
TTC38-207ENST00000629918 CEP164Q9UPV0 1460 aa20.78■□□□□ 0.92
TTC38-207ENST00000629918 ARAP1Q96P48 1450 aa20.72■□□□□ 0.91
TTC38-207ENST00000629918 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
TTC38-207ENST00000629918 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
TTC38-207ENST00000629918 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
TTC38-207ENST00000629918 ZNF608Q9ULD9 1512 aaPredicted RBP20.57■□□□□ 0.88
TTC38-207ENST00000629918 CFTRP13569 1480 aa20.53■□□□□ 0.88
TTC38-207ENST00000629918 RSF1Q96T23 1441 aaPredicted RBP20.49■□□□□ 0.87
TTC38-207ENST00000629918 ILDR1Q86SU0 546 aaPredicted RBP20.47■□□□□ 0.87
TTC38-207ENST00000629918 IFT140Q96RY7 1462 aa20.45■□□□□ 0.86
TTC38-207ENST00000629918 CHD1O14646 1710 aa20.39■□□□□ 0.86
TTC38-207ENST00000629918 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
TTC38-207ENST00000629918 WIZO95785 1651 aa20.32■□□□□ 0.84
TTC38-207ENST00000629918 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
TTC38-207ENST00000629918 AQRO60306 1485 aaKnown RBP eCLIP20.21■□□□□ 0.834e-10■■■■□ 23.3
TTC38-207ENST00000629918 TOPBP1Q92547 1522 aa20.21■□□□□ 0.83
TTC38-207ENST00000629918 TARBP1Q13395 1621 aaKnown RBP20.15■□□□□ 0.82
TTC38-207ENST00000629918 PRDM2Q13029 1718 aa20.14■□□□□ 0.81
TTC38-207ENST00000629918 FBLN2P98095 1184 aa20.14■□□□□ 0.81
TTC38-207ENST00000629918 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
TTC38-207ENST00000629918 KDM4FA0A1W2PPD8 638 aa20.03■□□□□ 0.8
TTC38-207ENST00000629918 GAPVD1Q14C86 1478 aa20.03■□□□□ 0.8
TTC38-207ENST00000629918 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
TTC38-207ENST00000629918 SYNJ1O43426 1573 aa20■□□□□ 0.79
TTC38-207ENST00000629918 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
TTC38-207ENST00000629918 SNAPC4Q5SXM2 1469 aa19.94■□□□□ 0.78
TTC38-207ENST00000629918 POLA1P09884 1462 aaPredicted RBP19.93■□□□□ 0.78
TTC38-207ENST00000629918 KIF13AQ9H1H9 1805 aa19.9■□□□□ 0.78
TTC38-207ENST00000629918 TDRD9Q8NDG6 1382 aaKnown RBP19.9■□□□□ 0.78
TTC38-207ENST00000629918 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
TTC38-207ENST00000629918 RAD54L2Q9Y4B4 1467 aa19.87■□□□□ 0.77
TTC38-207ENST00000629918 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
TTC38-207ENST00000629918 WDR97A6NE52 1622 aa19.82■□□□□ 0.76
TTC38-207ENST00000629918 ERCC6L2Q5T890 1561 aa19.82■□□□□ 0.76
TTC38-207ENST00000629918 SYNJ2O15056 1496 aa19.81■□□□□ 0.76
TTC38-207ENST00000629918 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
TTC38-207ENST00000629918 SOGA1O94964 1423 aa19.78■□□□□ 0.76
TTC38-207ENST00000629918 GRIN2BQ13224 1484 aa19.74■□□□□ 0.75
TTC38-207ENST00000629918 ABCC10Q5T3U5 1492 aa19.66■□□□□ 0.74
TTC38-207ENST00000629918 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
TTC38-207ENST00000629918 FGD5Q6ZNL6 1462 aa19.62■□□□□ 0.73
TTC38-207ENST00000629918 FAM69CQ0P6D2 419 aa19.6■□□□□ 0.73
TTC38-207ENST00000629918 HECW2Q9P2P5 1572 aa19.6■□□□□ 0.73
TTC38-207ENST00000629918 KDM6BO15054 1643 aa19.59■□□□□ 0.73
TTC38-207ENST00000629918 SHROOM2Q13796 1616 aa19.58■□□□□ 0.72
TTC38-207ENST00000629918 FBXO41Q8TF61 875 aa19.57■□□□□ 0.72
TTC38-207ENST00000629918 PBRM1Q86U86 1689 aa19.56■□□□□ 0.72
TTC38-207ENST00000629918 DIP2BQ9P265 1576 aa19.55■□□□□ 0.72
TTC38-207ENST00000629918 NUP160Q12769 1436 aa19.54■□□□□ 0.72
TTC38-207ENST00000629918 ADGRL1O94910 1474 aa19.51■□□□□ 0.71
TTC38-207ENST00000629918 MAPKBP1O60336 1514 aa19.51■□□□□ 0.71
TTC38-207ENST00000629918 GRIN2AQ12879 1464 aa19.5■□□□□ 0.71
TTC38-207ENST00000629918 CUX1P39880 1505 aa19.48■□□□□ 0.71
TTC38-207ENST00000629918 ABCA5Q8WWZ7 1642 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms