RNA–Protein interactions for RNA: ENST00000629693.1

LINC02028-228, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5

Gene LINC02028, Length 321 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-228ENST00000629693 NISCHQ9Y2I1 1504 aa27.29■■□□□ 1.96
LINC02028-228ENST00000629693 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
LINC02028-228ENST00000629693 ZCCHC6Q5VYS8 1495 aaKnown RBP22.92■■□□□ 1.26
LINC02028-228ENST00000629693 ABCC9O60706 1549 aa22.69■■□□□ 1.22
LINC02028-228ENST00000629693 DCAF1Q9Y4B6 1507 aa22.66■■□□□ 1.22
LINC02028-228ENST00000629693 MYO15BQ96JP2 1530 aa22.49■■□□□ 1.19
LINC02028-228ENST00000629693 DCAF8L2P0C7V8 631 aa22.36■■□□□ 1.17
LINC02028-228ENST00000629693 NACADO15069 1562 aa22.36■■□□□ 1.17
LINC02028-228ENST00000629693 RB1CC1Q8TDY2 1594 aa22.19■■□□□ 1.14
LINC02028-228ENST00000629693 SHROOM4Q9ULL8 1493 aa21.91■■□□□ 1.1
LINC02028-228ENST00000629693 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
LINC02028-228ENST00000629693 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
LINC02028-228ENST00000629693 BICRAQ9NZM4 1560 aa21.52■■□□□ 1.04
LINC02028-228ENST00000629693 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
LINC02028-228ENST00000629693 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
LINC02028-228ENST00000629693 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
LINC02028-228ENST00000629693 RSF1Q96T23 1441 aaPredicted RBP21.04■□□□□ 0.96
LINC02028-228ENST00000629693 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
LINC02028-228ENST00000629693 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
LINC02028-228ENST00000629693 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
LINC02028-228ENST00000629693 EIF4G1Q04637 1599 aaKnown RBP20.88■□□□□ 0.93
LINC02028-228ENST00000629693 WIZO95785 1651 aa20.86■□□□□ 0.93
LINC02028-228ENST00000629693 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
LINC02028-228ENST00000629693 SMARCA2P51531 1590 aa20.74■□□□□ 0.91
LINC02028-228ENST00000629693 ATAD2BQ9ULI0 1458 aa20.72■□□□□ 0.91
LINC02028-228ENST00000629693 TOP2AP11388 1531 aaKnown RBP20.69■□□□□ 0.9
LINC02028-228ENST00000629693 NCAPD3P42695 1498 aa20.61■□□□□ 0.89
LINC02028-228ENST00000629693 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
LINC02028-228ENST00000629693 HMGXB3Q12766 1538 aa20.6■□□□□ 0.89
LINC02028-228ENST00000629693 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
LINC02028-228ENST00000629693 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
LINC02028-228ENST00000629693 DNAJC5BQ9UF47 199 aa20.16■□□□□ 0.82
LINC02028-228ENST00000629693 CFTRP13569 1480 aa20.08■□□□□ 0.81
LINC02028-228ENST00000629693 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
LINC02028-228ENST00000629693 CHIC1Q5VXU3 224 aa20.04■□□□□ 0.8
LINC02028-228ENST00000629693 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
LINC02028-228ENST00000629693 LAMC3Q9Y6N6 1575 aa19.96■□□□□ 0.79
LINC02028-228ENST00000629693 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
LINC02028-228ENST00000629693 NESP48681 1621 aa19.87■□□□□ 0.77
LINC02028-228ENST00000629693 WRNQ14191 1432 aaPredicted RBP eCLIP19.82■□□□□ 0.76
LINC02028-228ENST00000629693 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
LINC02028-228ENST00000629693 TRIM41Q8WV44 630 aa19.78■□□□□ 0.76
LINC02028-228ENST00000629693 SYNJ1O43426 1573 aa19.76■□□□□ 0.75
LINC02028-228ENST00000629693 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
LINC02028-228ENST00000629693 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
LINC02028-228ENST00000629693 TOP2BQ02880 1626 aa19.74■□□□□ 0.75
LINC02028-228ENST00000629693 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
LINC02028-228ENST00000629693 KIF21AQ7Z4S6 1674 aa19.7■□□□□ 0.74
LINC02028-228ENST00000629693 CUX1P39880 1505 aa19.7■□□□□ 0.74
LINC02028-228ENST00000629693 DNMBPQ6XZF7 1577 aa19.62■□□□□ 0.73
LINC02028-228ENST00000629693 URB2Q14146 1524 aaKnown RBP19.57■□□□□ 0.72
LINC02028-228ENST00000629693 TOPBP1Q92547 1522 aa19.57■□□□□ 0.72
LINC02028-228ENST00000629693 MRC2Q9UBG0 1479 aa19.54■□□□□ 0.72
LINC02028-228ENST00000629693 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
LINC02028-228ENST00000629693 ERCC6Q03468 1493 aa19.5■□□□□ 0.71
LINC02028-228ENST00000629693 WDR62O43379 1518 aa19.48■□□□□ 0.71
LINC02028-228ENST00000629693 EEA1Q15075 1411 aa19.47■□□□□ 0.71
LINC02028-228ENST00000629693 THOC2Q8NI27 1593 aaKnown RBP19.47■□□□□ 0.71
LINC02028-228ENST00000629693 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
LINC02028-228ENST00000629693 SOGA1O94964 1423 aa19.45■□□□□ 0.7
LINC02028-228ENST00000629693 RUSC2Q8N2Y8 1516 aa19.39■□□□□ 0.69
LINC02028-228ENST00000629693 WDR97A6NE52 1622 aa19.38■□□□□ 0.69
LINC02028-228ENST00000629693 ABCA10Q8WWZ4 1543 aa19.37■□□□□ 0.69
LINC02028-228ENST00000629693 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
LINC02028-228ENST00000629693 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
LINC02028-228ENST00000629693 FAM9AQ8IZU1 332 aaPredicted RBP19.33■□□□□ 0.68
LINC02028-228ENST00000629693 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.68
LINC02028-228ENST00000629693 CUX2O14529 1486 aa19.31■□□□□ 0.68
LINC02028-228ENST00000629693 CSRNP3Q8WYN3 585 aa19.28■□□□□ 0.68
LINC02028-228ENST00000629693 IFT140Q96RY7 1462 aa19.27■□□□□ 0.67
LINC02028-228ENST00000629693 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
LINC02028-228ENST00000629693 KIF21BO75037 1637 aa19.25■□□□□ 0.67
LINC02028-228ENST00000629693 PRXQ9BXM0 1461 aa19.18■□□□□ 0.66
LINC02028-228ENST00000629693 LOC105371045A0A1W2PR82 267 aa19.18■□□□□ 0.66
LINC02028-228ENST00000629693 IGF1RP08069 1367 aa19.17■□□□□ 0.66
LINC02028-228ENST00000629693 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
LINC02028-228ENST00000629693 ERICH3Q5RHP9 1530 aa19.16■□□□□ 0.66
LINC02028-228ENST00000629693 GOLGA3Q08378 1498 aa19.15■□□□□ 0.66
LINC02028-228ENST00000629693 TDRD9Q8NDG6 1382 aaKnown RBP19.14■□□□□ 0.65
LINC02028-228ENST00000629693 CUL7Q14999 1698 aa19.14■□□□□ 0.65
LINC02028-228ENST00000629693 PBRM1Q86U86 1689 aa19.13■□□□□ 0.65
LINC02028-228ENST00000629693 ZNF608Q9ULD9 1512 aaPredicted RBP19.1■□□□□ 0.65
LINC02028-228ENST00000629693 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
LINC02028-228ENST00000629693 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
LINC02028-228ENST00000629693 AQRO60306 1485 aaKnown RBP eCLIP19.07■□□□□ 0.64
LINC02028-228ENST00000629693 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
LINC02028-228ENST00000629693 GRIN2BQ13224 1484 aa19.06■□□□□ 0.64
LINC02028-228ENST00000629693 TNIKQ9UKE5 1360 aa19.04■□□□□ 0.64
LINC02028-228ENST00000629693 ADAMTS12P58397 1594 aa19.01■□□□□ 0.63
LINC02028-228ENST00000629693 EHMT2Q96KQ7 1210 aa18.99■□□□□ 0.63
LINC02028-228ENST00000629693 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
LINC02028-228ENST00000629693 MAGI1Q96QZ7 1491 aaPredicted RBP18.96■□□□□ 0.63
LINC02028-228ENST00000629693 UBTFP17480 764 aaKnown RBP18.95■□□□□ 0.62
LINC02028-228ENST00000629693 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
LINC02028-228ENST00000629693 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
LINC02028-228ENST00000629693 CTTNBP2Q8WZ74 1663 aa18.89■□□□□ 0.61
LINC02028-228ENST00000629693 SYNJ2O15056 1496 aa18.86■□□□□ 0.61
LINC02028-228ENST00000629693 GRIN2AQ12879 1464 aa18.84■□□□□ 0.61
LINC02028-228ENST00000629693 CLIP1P30622 1438 aa18.8■□□□□ 0.6
LINC02028-228ENST00000629693 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms