RNA–Protein interactions for RNA: ENST00000628922.1

U3.53-201, humanhuman

BASIC

Gene U3, Length 216 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.53-201ENST00000628922 AEBP2Q6ZN18 517 aaPredicted RBP11.74□□□□□ -0.53
U3.53-201ENST00000628922 NISCHQ9Y2I1 1504 aa11.05□□□□□ -0.64
U3.53-201ENST00000628922 CHIC1Q5VXU3 224 aa11.01□□□□□ -0.65
U3.53-201ENST00000628922 SENP3Q9H4L4 574 aaPredicted RBP10.13□□□□□ -0.79
U3.53-201ENST00000628922 PHF23Q9BUL5 403 aaPredicted RBP9.9□□□□□ -0.82
U3.53-201ENST00000628922 CCDC180Q9P1Z9 1646 aa9.84□□□□□ -0.83
U3.53-201ENST00000628922 POTEDQ86YR6 584 aa9.48□□□□□ -0.89
U3.53-201ENST00000628922 ABCC9O60706 1549 aa9.47□□□□□ -0.89
U3.53-201ENST00000628922 FOXD1Q16676 465 aa9.45□□□□□ -0.9
U3.53-201ENST00000628922 ZCCHC6Q5VYS8 1495 aaKnown RBP9.23□□□□□ -0.93
U3.53-201ENST00000628922 DCAF8L2P0C7V8 631 aa9.21□□□□□ -0.94
U3.53-201ENST00000628922 NACADO15069 1562 aa9.19□□□□□ -0.94
U3.53-201ENST00000628922 RB1CC1Q8TDY2 1594 aa9.19□□□□□ -0.94
U3.53-201ENST00000628922 DCAF1Q9Y4B6 1507 aa9.15□□□□□ -0.94
U3.53-201ENST00000628922 MYO15BQ96JP2 1530 aa9.15□□□□□ -0.95
U3.53-201ENST00000628922 MSH5O43196 834 aa9.05□□□□□ -0.96
U3.53-201ENST00000628922 UNC13AQ9UPW8 1703 aa9.02□□□□□ -0.96
U3.53-201ENST00000628922 SCRIBQ14160 1630 aa8.97□□□□□ -0.97
U3.53-201ENST00000628922 BICRAQ9NZM4 1560 aa8.87□□□□□ -0.99
U3.53-201ENST00000628922 PABPN1Q86U42 306 aaKnown RBP eCLIP8.85□□□□□ -0.99
U3.53-201ENST00000628922 SHROOM4Q9ULL8 1493 aa8.8□□□□□ -1
U3.53-201ENST00000628922 PIAS4Q8N2W9 510 aaPredicted RBP8.72□□□□□ -1.01
U3.53-201ENST00000628922 EIF4G1Q04637 1599 aaKnown RBP8.65□□□□□ -1.03
U3.53-201ENST00000628922 CC2D2AQ9P2K1 1620 aa8.59□□□□□ -1.03
U3.53-201ENST00000628922 SMARCA4P51532 1647 aa8.58□□□□□ -1.04
U3.53-201ENST00000628922 CECR2Q9BXF3 1484 aa8.58□□□□□ -1.04
U3.53-201ENST00000628922 BAZ1AQ9NRL2 1556 aaPredicted RBP8.58□□□□□ -1.04
U3.53-201ENST00000628922 DNAJC5BQ9UF47 199 aa8.54□□□□□ -1.04
U3.53-201ENST00000628922 MROH2BQ7Z745 1585 aa8.52□□□□□ -1.04
U3.53-201ENST00000628922 SMARCA2P51531 1590 aa8.5□□□□□ -1.05
U3.53-201ENST00000628922 PPP6R1Q9UPN7 881 aa8.5□□□□□ -1.05
U3.53-201ENST00000628922 PEG3Q9GZU2 1588 aa8.48□□□□□ -1.05
U3.53-201ENST00000628922 WIZO95785 1651 aa8.47□□□□□ -1.05
U3.53-201ENST00000628922 ATAD2BQ9ULI0 1458 aa8.47□□□□□ -1.05
U3.53-201ENST00000628922 PLPPR3Q6T4P5 718 aa8.45□□□□□ -1.06
U3.53-201ENST00000628922 RSF1Q96T23 1441 aaPredicted RBP8.45□□□□□ -1.06
U3.53-201ENST00000628922 NCAPD3P42695 1498 aa8.45□□□□□ -1.06
U3.53-201ENST00000628922 HMGXB3Q12766 1538 aa8.44□□□□□ -1.06
U3.53-201ENST00000628922 ADRA2BP18089 450 aa8.44□□□□□ -1.06
U3.53-201ENST00000628922 BAZ1BQ9UIG0 1483 aaKnown RBP8.44□□□□□ -1.06
U3.53-201ENST00000628922 TOP2AP11388 1531 aaKnown RBP8.37□□□□□ -1.07
U3.53-201ENST00000628922 SUPT5HO00267 1087 aaKnown RBP8.33□□□□□ -1.08
U3.53-201ENST00000628922 LAMC3Q9Y6N6 1575 aa8.26□□□□□ -1.09
U3.53-201ENST00000628922 CCDC88BA6NC98 1476 aa8.26□□□□□ -1.09
U3.53-201ENST00000628922 PRDM2Q13029 1718 aa8.23□□□□□ -1.09
U3.53-201ENST00000628922 NESP48681 1621 aa8.22□□□□□ -1.09
U3.53-201ENST00000628922 CADPSQ9ULU8 1353 aa8.21□□□□□ -1.1
U3.53-201ENST00000628922 KIF21AQ7Z4S6 1674 aa8.19□□□□□ -1.1
U3.53-201ENST00000628922 CFTRP13569 1480 aa8.18□□□□□ -1.1
U3.53-201ENST00000628922 ERCC6Q03468 1493 aa8.18□□□□□ -1.1
U3.53-201ENST00000628922 PDS5BQ9NTI5 1447 aa8.17□□□□□ -1.1
U3.53-201ENST00000628922 FANCD2Q9BXW9 1451 aa8.13□□□□□ -1.11
U3.53-201ENST00000628922 CEP164Q9UPV0 1460 aa8.13□□□□□ -1.11
U3.53-201ENST00000628922 THOC2Q8NI27 1593 aaKnown RBP8.1□□□□□ -1.11
U3.53-201ENST00000628922 MRC2Q9UBG0 1479 aa8.08□□□□□ -1.12
U3.53-201ENST00000628922 WDR62O43379 1518 aa8.05□□□□□ -1.12
U3.53-201ENST00000628922 CUX2O14529 1486 aa8.04□□□□□ -1.12
U3.53-201ENST00000628922 ABCC8Q09428 1581 aa8.04□□□□□ -1.12
U3.53-201ENST00000628922 DNMBPQ6XZF7 1577 aa8.04□□□□□ -1.12
U3.53-201ENST00000628922 URB2Q14146 1524 aaKnown RBP8.03□□□□□ -1.12
U3.53-201ENST00000628922 TOPBP1Q92547 1522 aa8.01□□□□□ -1.13
U3.53-201ENST00000628922 CUX1P39880 1505 aa7.99□□□□□ -1.13
U3.53-201ENST00000628922 BIVM-ERCC5R4GMW8 1640 aa7.99□□□□□ -1.13
U3.53-201ENST00000628922 WRNQ14191 1432 aaPredicted RBP eCLIP7.98□□□□□ -1.13
U3.53-201ENST00000628922 TOP2BQ02880 1626 aa7.97□□□□□ -1.13
U3.53-201ENST00000628922 DMRT2Q9Y5R5 561 aa7.97□□□□□ -1.13
U3.53-201ENST00000628922 SYNJ1O43426 1573 aa7.97□□□□□ -1.13
U3.53-201ENST00000628922 FGD5Q6ZNL6 1462 aa7.95□□□□□ -1.14
U3.53-201ENST00000628922 CACNB1Q02641 598 aaPredicted RBP7.95□□□□□ -1.14
U3.53-201ENST00000628922 POLA1P09884 1462 aaPredicted RBP7.94□□□□□ -1.14
U3.53-201ENST00000628922 IFT140Q96RY7 1462 aa7.94□□□□□ -1.14
U3.53-201ENST00000628922 TARBP1Q13395 1621 aaKnown RBP7.93□□□□□ -1.14
U3.53-201ENST00000628922 WDR97A6NE52 1622 aa7.92□□□□□ -1.14
U3.53-201ENST00000628922 SOGA1O94964 1423 aa7.92□□□□□ -1.14
U3.53-201ENST00000628922 RAD54L2Q9Y4B4 1467 aa7.91□□□□□ -1.14
U3.53-201ENST00000628922 EIF4G3O43432 1585 aaKnown RBP7.89□□□□□ -1.15
U3.53-201ENST00000628922 PBRM1Q86U86 1689 aa7.88□□□□□ -1.15
U3.53-201ENST00000628922 ABCA10Q8WWZ4 1543 aa7.88□□□□□ -1.15
U3.53-201ENST00000628922 ZNF608Q9ULD9 1512 aaPredicted RBP7.88□□□□□ -1.15
U3.53-201ENST00000628922 TRIM41Q8WV44 630 aa7.87□□□□□ -1.15
U3.53-201ENST00000628922 MAPK8IP2Q13387 824 aaPredicted RBP7.86□□□□□ -1.15
U3.53-201ENST00000628922 ABCA5Q8WWZ7 1642 aa7.85□□□□□ -1.15
U3.53-201ENST00000628922 AQRO60306 1485 aaKnown RBP eCLIP7.85□□□□□ -1.15
U3.53-201ENST00000628922 TDRD9Q8NDG6 1382 aaKnown RBP7.84□□□□□ -1.15
U3.53-201ENST00000628922 GAPVD1Q14C86 1478 aa7.84□□□□□ -1.15
U3.53-201ENST00000628922 GRIN2BQ13224 1484 aa7.82□□□□□ -1.16
U3.53-201ENST00000628922 KIF27Q86VH2 1401 aa7.81□□□□□ -1.16
U3.53-201ENST00000628922 CHD1O14646 1710 aa7.81□□□□□ -1.16
U3.53-201ENST00000628922 SCAF1Q9H7N4 1312 aaKnown RBP7.8□□□□□ -1.16
U3.53-201ENST00000628922 SNAPC4Q5SXM2 1469 aa7.8□□□□□ -1.16
U3.53-201ENST00000628922 ERICH3Q5RHP9 1530 aa7.79□□□□□ -1.16
U3.53-201ENST00000628922 MAGI1Q96QZ7 1491 aaPredicted RBP7.79□□□□□ -1.16
U3.53-201ENST00000628922 CUL7Q14999 1698 aa7.78□□□□□ -1.16
U3.53-201ENST00000628922 ADAMTS12P58397 1594 aa7.77□□□□□ -1.17
U3.53-201ENST00000628922 SYNJ2O15056 1496 aa7.75□□□□□ -1.17
U3.53-201ENST00000628922 RUSC2Q8N2Y8 1516 aa7.75□□□□□ -1.17
U3.53-201ENST00000628922 FBLN2P98095 1184 aa7.75□□□□□ -1.17
U3.53-201ENST00000628922 CHMP7Q8WUX9 453 aaPredicted RBP7.75□□□□□ -1.17
U3.53-201ENST00000628922 FHAD1B1AJZ9 1412 aa7.74□□□□□ -1.17
U3.53-201ENST00000628922 EEA1Q15075 1411 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms