RNA–Protein interactions for RNA: ENST00000628665.1

CHRNA4-212, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 4

Gene CHRNA4, Length 546 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-212ENST00000628665 NISCHQ9Y2I1 1504 aa38.89■■■■□ 3.82
CHRNA4-212ENST00000628665 CCDC180Q9P1Z9 1646 aa34.71■■■■□ 3.15
CHRNA4-212ENST00000628665 ABCC9O60706 1549 aa34.29■■■■□ 3.08
CHRNA4-212ENST00000628665 RB1CC1Q8TDY2 1594 aa32.86■■■□□ 2.85
CHRNA4-212ENST00000628665 DCAF8L2P0C7V8 631 aa32.8■■■□□ 2.84
CHRNA4-212ENST00000628665 NACADO15069 1562 aa32.73■■■□□ 2.83
CHRNA4-212ENST00000628665 MYO15BQ96JP2 1530 aa32.4■■■□□ 2.78
CHRNA4-212ENST00000628665 ZCCHC6Q5VYS8 1495 aaKnown RBP32.3■■■□□ 2.76
CHRNA4-212ENST00000628665 DCAF1Q9Y4B6 1507 aa32.15■■■□□ 2.74
CHRNA4-212ENST00000628665 UNC13AQ9UPW8 1703 aa32.04■■■□□ 2.72
CHRNA4-212ENST00000628665 PABPN1Q86U42 306 aaKnown RBP eCLIP32.02■■■□□ 2.72
CHRNA4-212ENST00000628665 BICRAQ9NZM4 1560 aa31.77■■■□□ 2.68
CHRNA4-212ENST00000628665 DNAJC5BQ9UF47 199 aa31.69■■■□□ 2.66
CHRNA4-212ENST00000628665 SCRIBQ14160 1630 aa31.67■■■□□ 2.66
CHRNA4-212ENST00000628665 SHROOM4Q9ULL8 1493 aa31.48■■■□□ 2.63
CHRNA4-212ENST00000628665 EIF4G1Q04637 1599 aaKnown RBP31.01■■■□□ 2.56
CHRNA4-212ENST00000628665 CC2D2AQ9P2K1 1620 aa30.98■■■□□ 2.55
CHRNA4-212ENST00000628665 CECR2Q9BXF3 1484 aa30.84■■■□□ 2.53
CHRNA4-212ENST00000628665 SMARCA4P51532 1647 aa30.24■■■□□ 2.43
CHRNA4-212ENST00000628665 BAZ1AQ9NRL2 1556 aaPredicted RBP30.2■■■□□ 2.42
CHRNA4-212ENST00000628665 NCAPD3P42695 1498 aa30.19■■■□□ 2.42
CHRNA4-212ENST00000628665 ATAD2BQ9ULI0 1458 aa30.16■■■□□ 2.42
CHRNA4-212ENST00000628665 SMARCA2P51531 1590 aa30.15■■■□□ 2.42
CHRNA4-212ENST00000628665 HMGXB3Q12766 1538 aa30.01■■■□□ 2.39
CHRNA4-212ENST00000628665 MROH2BQ7Z745 1585 aa29.95■■■□□ 2.39
CHRNA4-212ENST00000628665 BAZ1BQ9UIG0 1483 aaKnown RBP29.94■■■□□ 2.38
CHRNA4-212ENST00000628665 PEG3Q9GZU2 1588 aa29.92■■■□□ 2.38
CHRNA4-212ENST00000628665 ERCC6Q03468 1493 aa29.64■■■□□ 2.34
CHRNA4-212ENST00000628665 WIZO95785 1651 aa29.63■■■□□ 2.33
CHRNA4-212ENST00000628665 NESP48681 1621 aa29.54■■■□□ 2.32
CHRNA4-212ENST00000628665 RSF1Q96T23 1441 aaPredicted RBP29.52■■■□□ 2.32
CHRNA4-212ENST00000628665 LAMC3Q9Y6N6 1575 aa29.46■■■□□ 2.31
CHRNA4-212ENST00000628665 CUX2O14529 1486 aa29.37■■■□□ 2.29
CHRNA4-212ENST00000628665 CADPSQ9ULU8 1353 aa29.33■■■□□ 2.29
CHRNA4-212ENST00000628665 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
CHRNA4-212ENST00000628665 TOP2AP11388 1531 aaKnown RBP29.3■■■□□ 2.28
CHRNA4-212ENST00000628665 KIF21AQ7Z4S6 1674 aa29.19■■■□□ 2.26
CHRNA4-212ENST00000628665 THOC2Q8NI27 1593 aaKnown RBP29.13■■■□□ 2.25
CHRNA4-212ENST00000628665 CFTRP13569 1480 aa29.05■■■□□ 2.24
CHRNA4-212ENST00000628665 MRC2Q9UBG0 1479 aa28.99■■■□□ 2.23
CHRNA4-212ENST00000628665 CEP164Q9UPV0 1460 aa28.99■■■□□ 2.23
CHRNA4-212ENST00000628665 FANCD2Q9BXW9 1451 aa28.98■■■□□ 2.23
CHRNA4-212ENST00000628665 CCDC88BA6NC98 1476 aa28.97■■■□□ 2.23
CHRNA4-212ENST00000628665 WDR62O43379 1518 aa28.87■■■□□ 2.21
CHRNA4-212ENST00000628665 DNAJC5Q9H3Z4 198 aa28.85■■■□□ 2.21
CHRNA4-212ENST00000628665 PRDM2Q13029 1718 aa28.82■■■□□ 2.2
CHRNA4-212ENST00000628665 SUPT5HO00267 1087 aaKnown RBP28.68■■■□□ 2.18
CHRNA4-212ENST00000628665 URB2Q14146 1524 aaKnown RBP28.67■■■□□ 2.18
CHRNA4-212ENST00000628665 ABCC8Q09428 1581 aa28.51■■■□□ 2.15
CHRNA4-212ENST00000628665 TOPBP1Q92547 1522 aa28.47■■■□□ 2.15
CHRNA4-212ENST00000628665 DNMBPQ6XZF7 1577 aa28.41■■■□□ 2.14
CHRNA4-212ENST00000628665 IFT140Q96RY7 1462 aa28.39■■■□□ 2.13
CHRNA4-212ENST00000628665 ZNF608Q9ULD9 1512 aaPredicted RBP28.24■■■□□ 2.11
CHRNA4-212ENST00000628665 POLA1P09884 1462 aaPredicted RBP28.2■■■□□ 2.1
CHRNA4-212ENST00000628665 OSCARQ8IYS5 282 aa28.19■■■□□ 2.1
CHRNA4-212ENST00000628665 TARBP1Q13395 1621 aaKnown RBP28.14■■■□□ 2.1
CHRNA4-212ENST00000628665 SOGA1O94964 1423 aa28.14■■■□□ 2.1
CHRNA4-212ENST00000628665 EIF4G3O43432 1585 aaKnown RBP28.12■■■□□ 2.09
CHRNA4-212ENST00000628665 CUX1P39880 1505 aa28.12■■■□□ 2.09
CHRNA4-212ENST00000628665 FGD5Q6ZNL6 1462 aa28.1■■■□□ 2.09
CHRNA4-212ENST00000628665 RAD54L2Q9Y4B4 1467 aa28.09■■■□□ 2.09
CHRNA4-212ENST00000628665 AQRO60306 1485 aaKnown RBP eCLIP28.08■■■□□ 2.09
CHRNA4-212ENST00000628665 TDRD9Q8NDG6 1382 aaKnown RBP28■■■□□ 2.07
CHRNA4-212ENST00000628665 WDR97A6NE52 1622 aa27.95■■■□□ 2.06
CHRNA4-212ENST00000628665 FBLN2P98095 1184 aa27.93■■■□□ 2.06
CHRNA4-212ENST00000628665 WRNQ14191 1432 aaPredicted RBP eCLIP27.89■■■□□ 2.06
CHRNA4-212ENST00000628665 CHD1O14646 1710 aa27.84■■■□□ 2.05
CHRNA4-212ENST00000628665 TRIM41Q8WV44 630 aa27.84■■■□□ 2.05
CHRNA4-212ENST00000628665 GRIN2BQ13224 1484 aa27.83■■■□□ 2.04
CHRNA4-212ENST00000628665 TOP2BQ02880 1626 aa27.82■■■□□ 2.04
CHRNA4-212ENST00000628665 ABCA10Q8WWZ4 1543 aa27.82■■■□□ 2.04
CHRNA4-212ENST00000628665 SNAPC4Q5SXM2 1469 aa27.81■■■□□ 2.04
CHRNA4-212ENST00000628665 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
CHRNA4-212ENST00000628665 GAPVD1Q14C86 1478 aa27.8■■■□□ 2.04
CHRNA4-212ENST00000628665 MAGI1Q96QZ7 1491 aaPredicted RBP27.78■■■□□ 2.04
CHRNA4-212ENST00000628665 CHMP7Q8WUX9 453 aaPredicted RBP27.78■■■□□ 2.04
CHRNA4-212ENST00000628665 SYNJ1O43426 1573 aa27.77■■■□□ 2.04
CHRNA4-212ENST00000628665 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
CHRNA4-212ENST00000628665 ABCA5Q8WWZ7 1642 aa27.69■■■□□ 2.02
CHRNA4-212ENST00000628665 SYNJ2O15056 1496 aa27.67■■■□□ 2.02
CHRNA4-212ENST00000628665 RIMBP3CA6NJZ7 1639 aa27.67■■■□□ 2.02
CHRNA4-212ENST00000628665 RIMBP3BA6NNM3 1639 aa27.67■■■□□ 2.02
CHRNA4-212ENST00000628665 RIMBP3Q9UFD9 1639 aa27.67■■■□□ 2.02
CHRNA4-212ENST00000628665 ARHGEF11O15085 1522 aa27.63■■■□□ 2.01
CHRNA4-212ENST00000628665 CLASP1Q7Z460 1538 aa27.5■■□□□ 1.99
CHRNA4-212ENST00000628665 CYB5RLQ6IPT4 315 aa27.49■■□□□ 1.99
CHRNA4-212ENST00000628665 ERICH3Q5RHP9 1530 aa27.49■■□□□ 1.99
CHRNA4-212ENST00000628665 FHAD1B1AJZ9 1412 aa27.46■■□□□ 1.99
CHRNA4-212ENST00000628665 ADAMTS12P58397 1594 aa27.46■■□□□ 1.99
CHRNA4-212ENST00000628665 GRIN2AQ12879 1464 aa27.44■■□□□ 1.98
CHRNA4-212ENST00000628665 ARAP1Q96P48 1450 aa27.37■■□□□ 1.97
CHRNA4-212ENST00000628665 KIF27Q86VH2 1401 aa27.35■■□□□ 1.97
CHRNA4-212ENST00000628665 NUP160Q12769 1436 aa27.32■■□□□ 1.96
CHRNA4-212ENST00000628665 CEP170Q5SW79 1584 aa27.29■■□□□ 1.96
CHRNA4-212ENST00000628665 IGF1RP08069 1367 aa27.23■■□□□ 1.95
CHRNA4-212ENST00000628665 CUL7Q14999 1698 aa27.19■■□□□ 1.94
CHRNA4-212ENST00000628665 JPH4Q96JJ6 628 aa27.13■■□□□ 1.93
CHRNA4-212ENST00000628665 SHROOM2Q13796 1616 aa27.12■■□□□ 1.93
CHRNA4-212ENST00000628665 CARMIL1Q5VZK9 1371 aa27.11■■□□□ 1.93
CHRNA4-212ENST00000628665 TRHP20396 242 aaPredicted RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms