RNA–Protein interactions for RNA: ENST00000628435.1

LINC00506-201, long intergenic non-protein coding RNA 506, humanhuman

TSL 4 BASIC

Gene LINC00506, Length 525 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00506-201ENST00000628435 NISCHQ9Y2I1 1504 aa14.13□□□□□ -0.15
LINC00506-201ENST00000628435 CCDC180Q9P1Z9 1646 aa12.55□□□□□ -0.4
LINC00506-201ENST00000628435 ABCC9O60706 1549 aa12.09□□□□□ -0.47
LINC00506-201ENST00000628435 ZCCHC6Q5VYS8 1495 aaKnown RBP11.83□□□□□ -0.52
LINC00506-201ENST00000628435 CHIC1Q5VXU3 224 aa11.73□□□□□ -0.53
LINC00506-201ENST00000628435 NACADO15069 1562 aa11.71□□□□□ -0.53
LINC00506-201ENST00000628435 DCAF1Q9Y4B6 1507 aa11.7□□□□□ -0.54
LINC00506-201ENST00000628435 AEBP2Q6ZN18 517 aaPredicted RBP11.7□□□□□ -0.54
LINC00506-201ENST00000628435 RB1CC1Q8TDY2 1594 aa11.7□□□□□ -0.54
LINC00506-201ENST00000628435 MYO15BQ96JP2 1530 aa11.7□□□□□ -0.54
LINC00506-201ENST00000628435 DCAF8L2P0C7V8 631 aa11.62□□□□□ -0.55
LINC00506-201ENST00000628435 UNC13AQ9UPW8 1703 aa11.52□□□□□ -0.56
LINC00506-201ENST00000628435 SCRIBQ14160 1630 aa11.46□□□□□ -0.57
LINC00506-201ENST00000628435 BICRAQ9NZM4 1560 aa11.39□□□□□ -0.59
LINC00506-201ENST00000628435 PABPN1Q86U42 306 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC00506-201ENST00000628435 SHROOM4Q9ULL8 1493 aa11.24□□□□□ -0.61
LINC00506-201ENST00000628435 EIF4G1Q04637 1599 aaKnown RBP11.05□□□□□ -0.64
LINC00506-201ENST00000628435 CECR2Q9BXF3 1484 aa11□□□□□ -0.65
LINC00506-201ENST00000628435 SMARCA4P51532 1647 aa10.97□□□□□ -0.65
LINC00506-201ENST00000628435 CC2D2AQ9P2K1 1620 aa10.97□□□□□ -0.65
LINC00506-201ENST00000628435 BAZ1AQ9NRL2 1556 aaPredicted RBP10.94□□□□□ -0.66
LINC00506-201ENST00000628435 DNAJC5BQ9UF47 199 aa10.93□□□□□ -0.66
LINC00506-201ENST00000628435 MROH2BQ7Z745 1585 aa10.91□□□□□ -0.66
LINC00506-201ENST00000628435 PEG3Q9GZU2 1588 aa10.85□□□□□ -0.67
LINC00506-201ENST00000628435 SMARCA2P51531 1590 aa10.83□□□□□ -0.68
LINC00506-201ENST00000628435 ATAD2BQ9ULI0 1458 aa10.83□□□□□ -0.68
LINC00506-201ENST00000628435 WIZO95785 1651 aa10.82□□□□□ -0.68
LINC00506-201ENST00000628435 HMGXB3Q12766 1538 aa10.8□□□□□ -0.68
LINC00506-201ENST00000628435 RSF1Q96T23 1441 aaPredicted RBP10.8□□□□□ -0.68
LINC00506-201ENST00000628435 NCAPD3P42695 1498 aa10.79□□□□□ -0.68
LINC00506-201ENST00000628435 BAZ1BQ9UIG0 1483 aaKnown RBP10.75□□□□□ -0.69
LINC00506-201ENST00000628435 TOP2AP11388 1531 aaKnown RBP10.7□□□□□ -0.7
LINC00506-201ENST00000628435 SUPT5HO00267 1087 aaKnown RBP10.57□□□□□ -0.72
LINC00506-201ENST00000628435 CCDC88BA6NC98 1476 aa10.54□□□□□ -0.72
LINC00506-201ENST00000628435 NESP48681 1621 aa10.53□□□□□ -0.72
LINC00506-201ENST00000628435 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.73
LINC00506-201ENST00000628435 PRDM2Q13029 1718 aa10.48□□□□□ -0.73
LINC00506-201ENST00000628435 CADPSQ9ULU8 1353 aa10.46□□□□□ -0.74
LINC00506-201ENST00000628435 CFTRP13569 1480 aa10.46□□□□□ -0.74
LINC00506-201ENST00000628435 KIF21AQ7Z4S6 1674 aa10.44□□□□□ -0.74
LINC00506-201ENST00000628435 ERCC6Q03468 1493 aa10.39□□□□□ -0.75
LINC00506-201ENST00000628435 THOC2Q8NI27 1593 aaKnown RBP10.39□□□□□ -0.75
LINC00506-201ENST00000628435 PDS5BQ9NTI5 1447 aa10.38□□□□□ -0.75
LINC00506-201ENST00000628435 FANCD2Q9BXW9 1451 aa10.37□□□□□ -0.75
LINC00506-201ENST00000628435 CEP164Q9UPV0 1460 aa10.36□□□□□ -0.75
LINC00506-201ENST00000628435 PHF23Q9BUL5 403 aaPredicted RBP10.35□□□□□ -0.75
LINC00506-201ENST00000628435 MRC2Q9UBG0 1479 aa10.31□□□□□ -0.76
LINC00506-201ENST00000628435 WDR62O43379 1518 aa10.3□□□□□ -0.76
LINC00506-201ENST00000628435 URB2Q14146 1524 aaKnown RBP10.29□□□□□ -0.76
LINC00506-201ENST00000628435 DNMBPQ6XZF7 1577 aa10.26□□□□□ -0.77
LINC00506-201ENST00000628435 CUX2O14529 1486 aa10.24□□□□□ -0.77
LINC00506-201ENST00000628435 TOPBP1Q92547 1522 aa10.24□□□□□ -0.77
LINC00506-201ENST00000628435 ABCC8Q09428 1581 aa10.24□□□□□ -0.77
LINC00506-201ENST00000628435 CUX1P39880 1505 aa10.23□□□□□ -0.77
LINC00506-201ENST00000628435 SYNJ1O43426 1573 aa10.21□□□□□ -0.78
LINC00506-201ENST00000628435 BIVM-ERCC5R4GMW8 1640 aa10.2□□□□□ -0.78
LINC00506-201ENST00000628435 TOP2BQ02880 1626 aa10.18□□□□□ -0.78
LINC00506-201ENST00000628435 WRNQ14191 1432 aaPredicted RBP eCLIP10.18□□□□□ -0.78
LINC00506-201ENST00000628435 POLA1P09884 1462 aaPredicted RBP10.17□□□□□ -0.78
LINC00506-201ENST00000628435 FGD5Q6ZNL6 1462 aa10.16□□□□□ -0.78
LINC00506-201ENST00000628435 WDR97A6NE52 1622 aa10.15□□□□□ -0.79
LINC00506-201ENST00000628435 TARBP1Q13395 1621 aaKnown RBP10.15□□□□□ -0.79
LINC00506-201ENST00000628435 IFT140Q96RY7 1462 aa10.11□□□□□ -0.79
LINC00506-201ENST00000628435 RAD54L2Q9Y4B4 1467 aa10.1□□□□□ -0.79
LINC00506-201ENST00000628435 EIF4G3O43432 1585 aaKnown RBP10.09□□□□□ -0.79
LINC00506-201ENST00000628435 ZNF608Q9ULD9 1512 aaPredicted RBP10.09□□□□□ -0.79
LINC00506-201ENST00000628435 SOGA1O94964 1423 aa10.07□□□□□ -0.8
LINC00506-201ENST00000628435 ABCA10Q8WWZ4 1543 aa10.07□□□□□ -0.8
LINC00506-201ENST00000628435 ABCA5Q8WWZ7 1642 aa10.06□□□□□ -0.8
LINC00506-201ENST00000628435 PBRM1Q86U86 1689 aa10.03□□□□□ -0.8
LINC00506-201ENST00000628435 AQRO60306 1485 aaKnown RBP eCLIP10.01□□□□□ -0.81
LINC00506-201ENST00000628435 TDRD9Q8NDG6 1382 aaKnown RBP10.01□□□□□ -0.81
LINC00506-201ENST00000628435 GAPVD1Q14C86 1478 aa9.98□□□□□ -0.81
LINC00506-201ENST00000628435 GRIN2BQ13224 1484 aa9.97□□□□□ -0.81
LINC00506-201ENST00000628435 SNAPC4Q5SXM2 1469 aa9.97□□□□□ -0.81
LINC00506-201ENST00000628435 TRIM41Q8WV44 630 aa9.95□□□□□ -0.82
LINC00506-201ENST00000628435 ADAMTS12P58397 1594 aa9.95□□□□□ -0.82
LINC00506-201ENST00000628435 CHD1O14646 1710 aa9.95□□□□□ -0.82
LINC00506-201ENST00000628435 ERICH3Q5RHP9 1530 aa9.94□□□□□ -0.82
LINC00506-201ENST00000628435 MAGI1Q96QZ7 1491 aaPredicted RBP9.94□□□□□ -0.82
LINC00506-201ENST00000628435 KIF27Q86VH2 1401 aa9.93□□□□□ -0.82
LINC00506-201ENST00000628435 RUSC2Q8N2Y8 1516 aa9.92□□□□□ -0.82
LINC00506-201ENST00000628435 CUL7Q14999 1698 aa9.91□□□□□ -0.82
LINC00506-201ENST00000628435 SYNJ2O15056 1496 aa9.89□□□□□ -0.83
LINC00506-201ENST00000628435 SENP3Q9H4L4 574 aaPredicted RBP9.88□□□□□ -0.83
LINC00506-201ENST00000628435 FHAD1B1AJZ9 1412 aa9.87□□□□□ -0.83
LINC00506-201ENST00000628435 IGF1RP08069 1367 aa9.87□□□□□ -0.83
LINC00506-201ENST00000628435 GRIN2AQ12879 1464 aa9.85□□□□□ -0.83
LINC00506-201ENST00000628435 EEA1Q15075 1411 aa9.84□□□□□ -0.83
LINC00506-201ENST00000628435 CEP170Q5SW79 1584 aa9.84□□□□□ -0.83
LINC00506-201ENST00000628435 CLASP1Q7Z460 1538 aa9.82□□□□□ -0.84
LINC00506-201ENST00000628435 PRXQ9BXM0 1461 aa9.81□□□□□ -0.84
LINC00506-201ENST00000628435 CARMIL1Q5VZK9 1371 aa9.81□□□□□ -0.84
LINC00506-201ENST00000628435 NUP160Q12769 1436 aa9.81□□□□□ -0.84
LINC00506-201ENST00000628435 FBLN2P98095 1184 aa9.8□□□□□ -0.84
LINC00506-201ENST00000628435 RAPGEF2Q9Y4G8 1499 aa9.79□□□□□ -0.84
LINC00506-201ENST00000628435 KIF21BO75037 1637 aa9.79□□□□□ -0.84
LINC00506-201ENST00000628435 CHMP7Q8WUX9 453 aaPredicted RBP9.79□□□□□ -0.84
LINC00506-201ENST00000628435 CTTNBP2Q8WZ74 1663 aa9.77□□□□□ -0.84
LINC00506-201ENST00000628435 FAM9AQ8IZU1 332 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms